XLOC_029936 (gene) - C. hemisphaerica

Overview
NameXLOC_029936
Unique NameXLOC_029936
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_118:191675..196143-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_029936 ID=XLOC_029936|Name=XLOC_029936|organism=Clytia hemisphaerica|type=gene|length=4469bp|location=Sequence derived from alignment at scaffold_118:191675..196143- (Clytia hemisphaerica)
TTAAGGTTTACTTTTTATGTGGGTGTTAGAGTGTCCTTTCCCAATATGGT TTTGTGCTATCTTCAAATCGCTTCCTTTATTTTGGCTATTATTTTCGTTC AAACAAAAGATAGAAAATAAAGATTTTATAATGGCACAACCTCCAAGCTA CGAAGCGTCACAAAATCCTGGATACCAAGCACCTCTATACCAACCTCAGG ATGGTGCCTACCCACCTCAGAATGGTGCCTACCCTCCTCAGAATGGTGCT TACCCTCCTCCTAATACAGGGATGGCTTATCCACCACCAACGCAAGGCTA CCAACCAGTACCAGCAGACCAACAGCAACCTTATGTTTACCCCGGAAAGC AAGAACCAGGCGTAGATGTAGAGTACCAAGGACATTCGGACGACAGTGAT AAACAGACAATGGGAATCATTTCATTTGATGACAAAAGTATTCGGCTAAG TAAGTCATGCTCCGTATTTGTCCCTCTTCAGCTTATTGCTTATGATTTAT TATTGTTATTATTATTATTATTATTACCACTATTTAGGGCTCCTGGATAC TACTAAAATGAAGTTGGTAAATTCTTTTTTTAAACTGTCATCAATTTTTA TTTTGTTGTTTCAGGTTTCATCAGAAAGGTTTTTAGCATCTTGATTTTGC AAATGTCAGTCACCTTGGCATTTATTGCTTGGTTCATCTTTCAGTAAGTG TACTTCCTTTTCTAAAACATAAATTTGATAGTTGATGATATTCAGTTTTT CTTACCAGTTGTTTTTGGTATCTGGTCTTTCTTATGATCGAATCAGTGCT TTTCAGACTTTTGGTTTTTATGGGTAAATGTAATGGATGGGCCATGGTCC AAAATTAAAACTTAAATAAATAACTGGCGTTTTTTTGTGGGTTACATCCA CCTTTTTGCTGTGCCCTCACACAATTGAAACCTTTTAAAGTATCTAGAAA ATAGTTTTGAAATTTAGATGCCATCTACAATCTCGGTCAAAATATATTAG GAATTTTGGTTAATGCCTCGTTTTCAACAATTTAAAGTTCGGGCGAAAAA GTCGCTTTTGGGCAAATTGATAAATTGATTGTAATATTTCAATTCGGGAG GGGATTATTGACTTCCAGGCTATATTCTGAGCCCTATTGGACCATTCTTG GACTTTTAGTTCCTCTTAAGTCTAACTGTTAAAACTCTACCCGCCCAACC TAATTTAGAGCGCTTCCTGGTTGTAAGATTTCGTGAGAATTTCCTTTTTT TTCTCAAATATTACTTTAAAGGAAGAAACTTTAAAGGAAGAAACTTTAAA GGAAGAAACTTTCGTGAATTCGCGATTTTTAGGCCAAATCGCGAATATTA AATTCCGCGAAAAATGCTATACGAATGTGTTGATACATTTATTGTTTGTA TTTGCTTTTATTTGGTGCGTGAGTAACAGACGAAGGTTTACGGAAGTGAA TAGAAACAGTTTTCTTCTAGAATAATGTTAAAAATGTTTTTAAATTGCCT TTATTCGCGAAAGTTAATTCTCGCGAAATATAATCAAAGGTGCTATTCGC GAAAGTAAATTCCCAAAATTTCGCGATTTTTTCGCCTCGCTTCCTTTAAA GTATGACTTTGATTGTACGTATTTTCAAGTTGTCCAATACTTAACGTCTA AATATTTTTGTAGAAAAAGAAGAAAAAAATTAGTGTTTTCTTATCGAGCC CAATATTTGTAAAGCGCAACAAAAGAAAGGTTTTCATTTTATAAATGAGG ATATTGCATTGCTACTTTAATTTCTAAATTACTTTTCAAACTGGGTGCGT CATTTCAACTTTGTTCCGTTTGCATACGCATGTCAAAATGAGGTTTTCAA ATGACGATAAGGGGGTTGTCAAGAATAATTACATGAAAAAAGGTTGAAAC GTTTGCCTATCATTGTGTTCTTGATTCTGTTAAAAAATAGCTGGTACAGT GCTCGGCATTATATGAAACAATTAGTTTCTTTCAATTTCAGTGAACCAAC GAAAGTGTTTGTCCAGAATCATGTTGGAATGTACATTGCCGGATAGTGAG TTTCTCTTCTGTTACTCTTAGGTGCCTTATGATATAAATGGTCAATTTTT CACTTCTTTTTCAAACTCCCAGAACCTAATTAATTTAATTTTTGAAAACG TTTTTAACGTCAAAAGAAGAGTCCATTATTTTACTCCAAATAGTCAGATT TAGTCTATAATTACCTTATTTTGGGGGGTTTTTAAAGGTATAATTTAATT CCAACCCCCTGTTTATTAGTCACCTGAGTACTCCACGAGTTTTTTTTAAG AAACAGTTAAACTTTTATTTGATTTTCTTGATTTTTTTTAAATATTCAAC TGAGGTTAAAGAAAACATTCCTTAAACACTTCCCATTTTATTTTCAGTGT TATTTTCTTGGTCCTGTATTTCGTGTTGGTGTGCTGCACAAGTGTGGCTC GACGACATCCAATCAATTTGGTTTTGCTTGCCATTTTCACCATCAGTCTT TCTTACATGGTTGCTGTCATCTCAAGCTTTCACGATACTAAAATTGTATT GGCTTTGTTTGGAATGACATTGGTAATTTTTAATGTTTAAGAGTTTTTTG GTAATAATATCTTCGATCCCAAGGGACTGGTATGTAAATTTCCCCTTTCA TGGTATTGCAATAAGGAATTTTCTGTTATTTTTTAGTTGATCAGTGTTGG CATTATTGGATTTGCATCCCAAACAAAGGTTAGTTAACAATATAACGGAA AGAACCGCTATGGAACTGCTAAAAAATCATTTGAACGGGATTAGGCGAAA TACATTTTTATTGAGATCACCAGAGCATATATAGGATCTTTTTCGACCCA AATGGCCTTTTTTGAATTTTTTTTATCCTTTTAACCCACGAACCCGAGAA AGATCTTAAATTCGGAATCAAATTCATTCATCTAAAGTTTTTTGAAGTAT CAGCTTGCTAAATGCGCTAAATATTTCCTCTAACTACCATCAACCCCTCA TTATAATTGTGTTGCTTTGCTTTTCAGTATGACTTCACCAAGTGGGCTGG TGTTTTGTTTGTCTGTTGTTTCGCTTTGTTCATTTTTGGATTATTTGCCG CCATCTTGATCCCAACTGGTGCTATGCAGGTAAAATTTATTCGTTTTGTT TCATCTCGAACCACCTGTAATATGAAAAATGTCCAACGAGCCTTTCTATC TACATTTCCAGCCAACATATATTTTTTTGTGTTGAAAAATGAGGGTGATA TACACACTTGACAGGACTTTCATTAATTCATCTTTTGAAATATTTTCAGG GTGTACGAATGGTGTATGCTGGACTTGGCGCGCTCCTCTTCATGGCTGTG AGTAGTTTTCTGATATTGTGTGTTTAATTTTACCATTCCTTGCATTGATA ATTATGCAGTATTTATGTGAAGCTTATTCTGTAACATGATTATTCATTGT ACAGTAACATTATGAAGAATCGTGTCTCATAAAAATTTTTTTTTTTACAT TAGTTCTTGGCATTTGACACTCAATTGATCATGGGAGGTAAGAAGTACGA GATCAGTCCTGAGGATTACGTCTTTGCCGCCATGATGCTTTATGTGGACA TAATCTACATCTTTTTGTATCTGTTGGCTTTGTTCGGTGGAAACAACTAA CAAGTTCCGTCGCCAACCACATTCTGTCAATCTCTTGGATTGAGCAAAGT CAAATTGAATTTTTCAACATCAAAATTTATATGATGTTCATATTTGATAT TTTAAAATTGCTATATCAATTATATCATCTCAATCTATTTGGTTCAGTTT TCCAAGTGAAGGCTTCGAACTTTTTGTATACATCAAATCAACTTGCTTTA TCATACTCGATTAGCAGGTCAAATCTTCGACTTAGGATACTATATGTAAA TTTTCATTTCTATTTTTTCCCAAATTTTTATTTTTGTGATGATCATGTCA TTTTCTTTTTCTTCAGAAGTTTATTCAGATTAATTATGTGTGATTATTAT ATTCATGACACATTGTAGAAAATAGTTGTATGTAAATAACTACGCATGTT TGAAATAACAAAGTCGATTGGATGGCTTTTTCACTCATCTAATGAACTTT GTTATGACATTACATAATGAAAAGAGGAGCATATACTTTAATCGGATTAA ATTTCGCGAAAATGGCGAAAGTTAATCAGATTAAAGTACGTTTGGAAAAA AATACAAAATAAAGTTTTTGCTTGGACAATTTTAATAATAGTGATTACCG TTCGAACGAGCACTCAATTCAATGTAATGATAGGGGGTTTTTATTAATTT TATAATTTTGGTAGGCGCAAACAGCGTCCCAAACACATCATATTACGTTT CTTTTTGTAACCTAATAAGATCTTTTTGTATGATAAAGTTTTATTTTCTA CTAATTGAAATAATAAAACTCTTCTTGTTTGAAATGAATGTGTCTTTTGT TCGGAAAATATAATTTGAA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00046926TCONS_00046926Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00046926-proteinTCONS_00046926-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_118supercontigscaffold_118:191675..196143 -
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
TMBIM1protein lifeguard 3 Homo Sapiens
FAIM2protein lifeguard 2 Homo Sapiens
GRINAprotein lifeguard 1 Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
78.34 77.03 104.65 119.15 93.78 68 69.53 72.67 88.14 74.85 81.38 70.22 72.8 70.39 67.86 72.44 67.89 74.69 72.86 85.15 74.47 75.23 77.15 80.32 57.03 56.62 111.09 103.02 63.34 50.81