XLOC_030007 (gene) - C. hemisphaerica

Overview
NameXLOC_030007
Unique NameXLOC_030007
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_120:357651..361713-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_030007 ID=XLOC_030007|Name=XLOC_030007|organism=Clytia hemisphaerica|type=gene|length=4063bp|location=Sequence derived from alignment at scaffold_120:357651..361713- (Clytia hemisphaerica)
CTCAAATAAGATAAAACTAGTTACAAACTAATCCAACTATGACTTCGGCA ATAAGAATGACAAAAGCAAAACTTCACAAGCCACAATACTATACACCAAT ATCATCTTCCTTGTACGATCACCGCCTGTTCCATCACAGAAAGGAAAGCT CGACATACAGGAATCATGGCTGTAGATGTGCTTTTGACGATAAACGAGCT AATGTCAAATCAAGAAACTTTCTTCCTAGTAACCAAGCGCTTTCTACAAA AATAACTTCATCAGACTTTCTATCAATCAATGGCACTGCACTTTCAAAGA CATTTCAACGCCAGAAGATTACAAGCTCTATATATCAGCAGAGTCCTAAT ATCATAAAACCGTATTTATCTCTCGTGCGTTTTGATAAGCCAGCCGGTAC CTGGTTACTTTATCTACCCTGTACTTGGAGTATATGCCTCGCTGCGACAC CTGGACATTTCCCAGATCTGAAAATGTTGGCACTGTTTGGTACAGGAGCA TTTATAATGCGTGGTGCTGGCTGTGTGATCAATGATATGTGGGATAGTGA CTTCGATAAAAAGGTTTTTTTTCTTTAGTTATATAATCTGATTGGACTTT TTGCAGAAAGTTAGGGTGAGACAATTAGTAACTATTTTAGTGCAAAACAT CTCGTTCCAAAACGAAGCGACATCGACGTTCATTCATTGGTTAGTCTCAA AACCAATAGAATAACTTCTTTATTCCATATTGCGGAAAGGGGTCTGACCC CGCTTATAAAATGACCCCCCCTTCTTGGCATCCCCCCAACCTTAAGAAAT GCCTGTCCCCAAGGGTTTTGGGCTAAATTTTCGAAAATATATACTGTATA AGTGCGATCCGATAATCCCCTTCTCGCTGCTACCCCCTTCTAAAAATCAA CCCCCTTGTTTTCTCTCTCTATTTGTTTATGGTAAAAAGGGAAGGGAAAC AGTAAAGAAAAATAAGTCTGGCAATAGCGCACCGCGCTGAATCTAAAAAT AGATTTTATTTTTGACATAATCAATACTCTCGATGTGTTTGTACGAGTTC CAATCCCATCAACCTTTGCGTTAATCTCTTTTGCACGTTAATTGCATCGT TTGACAAAAGATATATAACAGCTTGCACGTATTTTTAATTGAGCCCCGTT GAATTGTGGGATTGCAACTCGTACAAATGTCAAAAAAGTGAAAAGTAATA ATGACGTAAGCGTTGCGGAGTGCTATTATATGTAAGCCCCCCCTTCTTAA ACGATCCCCCTCCTTGCTATCCCCCCTTTTTAATGAAAATTTCTGATCCC CCCATTCTTCACTTTTTTGAAGGTGTCAAAAGGGGGGGGGGTCCGGACTA TGTATTCCGCTTCAGAAAAATGAAGAACCATAACTGGTGAACATGTTTTC AACTTTTTAAACTCATCTTAACAAATGAAATTCATTTCTTTAAAAATTTA CATTTTTTATCGTGATCCTGATGAATTCCAATCTTAATTAAAATTTGTTT CCATTTTTTACTTCACATGACAGGTTGATAGGACAGCGATGCGACCGATT GCATCAGGGCAACTGACGCATGCACAAGCAACGGTGTTTCTTGCTGGTCT ACTGTCGTGTGGTCTCGGCGTGCTTCTGTCTCTTAATTGGTACAGGTATG TGTCTTTACATCTTCATAAGAATTGTAAAAGCAGACAAAAGAGTAGAATA TTATGATACAGTAAGGACTCCATAACTTGAACCTCTGTTACTCGAATGTC TCATTAACTAAACAAGTTAGCTGCTGGTCCCTTCATTAACAAACTGTTAT AAGTAAGTCTCTATAACTCAATTTCTATAACTCGAACAAATTTGCGTTTC CCGTACCTGTTCGAGTTACGAAGATTCCTTTGTATTACGTTTTTAGTGTC TCTTATCTGTTATGATAATGATATTATTTTGCTTGTGTTTAGTGTTTTCT TAGGTGCTGCATCAATGGGTTTGGTGGTCGCTTATCCTTTAATGAAACGC TTCACCTATTGGCCTCAAATATTTCTAGGTAATATTATGCTTTCTTTGTT TGTTTTGGACAAGTCTTAATTGTGCGCTGTTTTAACAGTACGGAAATTTT GGGATTAAACATTTTATCCTTATAATACATTGTCAAGAAATCCAAGTGAT TCTTGCTGTGACGATCATTAGATATTGTCTCTTAAATCTAGGCGTAGTTT TTTAAATACACACACATGCCTGTAGATAAATCTTTACGGGTATAAACTCC ATCAATTATTTGGCCATTTTGCATGGTTTCATTCACTTTCATATACTCAT TCACACAAAACACGCACACGTTTCACACCATTAGCCATTACACTTAACTG GGGTACACTTTTCGGTTGGTCTGCTATACGGCGTCTGATTGGTCTATTTG TATACCACTTTACACAGCGGCCGTTGTCTGGACCATTTACTCACACCAAG TAGTAAAGACCATTCCAAATGTACGGACCTTGTATCTAAAATGAATGAAA GGTTGACTTTGACTGTTGCGTCAAGTTACGTCACTGTCTGATGCCATTGG GAACAGATATTTTTACGTAATCCGTCCTCGTAAACTCGGATTAAAACCCC TTGCATTAGATCAGTTTGTTTAACTTGTGTCTTTGATTATCATGTCCTTT TGATTCCTTTCCTTTACCCCTCATTTTAGGCTTAACTTTTAACTGGGGAG CATTGTTAGGTTGGACGGCAGTCCAAGGAAGCTGTGATTGGTCAGTGTGT CTGCCACTTTATACTGCTGGAATATTGTGGACCCTACACTACGATACTAT ATACGCTCACCAGGTAGCTAGAAACCCATTTTTCTTTCATACTCTTTGAT AATATGGCTAAGACCTTGCAACTACTGTATAGAAAAACTTCACAATCTTT CTCGACCATAAAAAAATTGGCTGCTTTGGACTGCCGTTGCAACTTTTCAA TATACTATTCTGGCATTAGTTGCAATTTGTTGAATGAAAAGTTCGGCACC AATCTTTTAGATTTTATCCAAAACTGATAACATTGCACTATCTGGTGTAT TTTAGGACAAAGTTGATGATATACAAGTGGGCGTAAAATCAACCGCCCTC TTCATGGGTGACCGCACAAAGATGTGGTTGACTGGCTTCTCTACCACTAT GGTAGGATGTCTAACAATGGTCGGACTGATGAGCGAGCAATGTTGGCCTT ACTATGCATCTTTGGCTGGTATTTCTACTCATCTAGCATGGCAGGTAATT CCCTTCAAGTAATGGGTAATGGAGNATGCATCTTTGGCTGGTATTTTAAC TCATCTAGCATGGCAGGTAATTCCCTTCAAGTAATGGGTAATGGAGTAAG CTTTATGAGGCATTTTTAACTGAAAGGGTCGAGTTGGAGAGATTCCACTG TATCTAGCTGTAAAGTGATTCAAATTACTCTCTGTAGTTCGAATCTTTCT CTAATTTGAATACAGCTTTTGGTCCCTGAAGATCAGATTAGAGAGAGTCA ACTGCGTAAGCAAGCGGACTGAAAATCTCTGTCTTACTTTTCATCGTTAC CTTCTTTTATTCCTATCAGCCACAGACTTTTACTCTACATTTTAACTTTG CAAATAGCCTGATTTTCGTGGTATAAGCTTCTCTCAAGAGTTATTTAGTG AATTTAATTAGTGAGCTGCCCTCCCTCCCGAAGGCATATTGAAATCTAAA AATTTGCACTTAAAATTGTAACATACTGTTAGAGGAGATATTTGAAAACA GTGTCATTTGTAAGTGTTTAAGAAACTTATATGCTTATCAAATTTACTTA TTCTTTCAGATCTACACGGTGAATCTTGACAACCCAACAGATTGTTTTTC CAAATTCTCATCGAACAGATATCTGGGTATGGTTTTAACAACTGCTATCA TATGTAGTACTTTACTCAAAACGTGATGAATATTTTTCATAATTGTAAGA AATGTTTTCTCAAGATTTTTCATATATTTTTTTAATCTTTGCAATCTTTA TTTTTGTACATACATTTTATAGAAAGCTTGTCATGCAAACAAGAGAAACT TTCATTCAAAAAA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00047064TCONS_00047064Clytia hemisphaericatranscript
TCONS_00047063TCONS_00047063Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00047064-proteinTCONS_00047064-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_120supercontigscaffold_120:357651..361713 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
43.87 42.62 29.04 24.51 3.78 2.95 3.04 3.79 6.37 5.12 5.91 6.04 5.28 7.1 8.58 9.24 9.8 11.93 3.81 3.92 10.16 11.55 40 30.27 7.91 7.13 2.95 3.6 18.98 21.41