XLOC_030011 (gene) - C. hemisphaerica

Overview
NameXLOC_030011
Unique NameXLOC_030011
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_120:412342..416691-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_030011 ID=XLOC_030011|Name=XLOC_030011|organism=Clytia hemisphaerica|type=gene|length=4350bp|location=Sequence derived from alignment at scaffold_120:412342..416691- (Clytia hemisphaerica)
TTCTAGATGAACTGAAAAATGAACGTGTTAGCTGATACTGAAATAGCGAT TCAAACATTTTATCATTCACAAGTCGAAGAACAACGCAATGAAGCACACA GATGGCTGCTTGAGCTTCAAAAGTCACCACAGGCATGGCAAGTCTCATTA TTATTGTTAGATGCAACAAAACCAACAGAATGTCAATATTATGGTGCAGT TATATTACACTACAAGATTTGTCATATGATGACAGAAGTTGGTGAAAAAG AAGTACAAGATTTAAAAAACAAGCTGGTTTTATTGATATCTTCAGCTTGC TCAGGTGCAAAGTTTGTTAGGACTAAATTATGCTCAATATTTGCAGTCTT GGTTTTACAAACCATGCAAGAGTCTGAGACATTGCTGACTTGTATCACCC AAGTCAGCTCTCATTTTCAGAATGTTAGTCCTCAACAATCAAAAGAAGTT ATTTTACAAATATTGATTGAATTCCCATCACAATTTAAAAACCTGAACAT GGATTCAAGTAAAAGATTGAAAGCAAGAGATTTTATGGTTCAATTTGCAG AACCACTGTTATCAATGTGGAATGAAATTTTAGCTGGTAAAGATGTTGAA ATGAAAAATGAAGCCTTGTCTTGTATGTTAGGTTGGATAGGTTTTGGTAT ATCTGCACTTGATATTGTGCCTTTAATACCAATTTTATTGAATCATATTG AAACTGAAGAACTCACTTCAAAAGTGTGTGAAGTCATAAGTGATGCTTTG ACCGACCCTAGTAGTTACTCTCTAGTCTCAAGTGTATTTGAATCTATAGA GAAATTATTATTGTTGGAACCTCTCATAGAAAAAGCATTACAGGATGAAA ATGATGATTTTGCATATAATGTTTGTATGATGATGGCCAATATTGGCGAG ACGCATTCCAACATCTTAGTCGCTACCAATAACCCAAGCCAACAAATGCT TGCCCTTCGATTGACCAAATTGATATTAAAATTTTCATCCATGCCAGGAC ATTACCCATCTGACGAAACATGTAGTAGATTGACGTTAACTTTTTGGTAT CATCTACAAGATGATTTAGTGGATGTCACAGTGACTGATTTTCAAAAACA GTTCCAAGATGCTTTTCTAATGTTGGTTGATGTGTATTTTGTTAAAGGAC AGTACCCACCTGATGAGGTATACAATAAATACACTAGCGAAGAGAAAGAA CTTTTTCGTTGTTATCGTATTGACATTCAAGACACTATCATGTATTTACA TCACACGTTGAGAGATCGCTGTTTATCTTATTTCATTGAAAAATTATCCA GCCTGTTATCATGTAAGTGACCTTTCTTTTTTGCCAAATTTTTTTTATTC TTTAAAATAAAAAAGCAAGACCAAAGCAAAAGGGATTTTCGAATCTTGCT ACTAGCCTTTGGAAGGGTTCATTTTTTCTGCAAACCCCTGGTTGGCGGGT CCTCAAAATAAACAGTAATATCTGGTAACATCATTATATCTAAGCAGATA AAAACTGGCCAGTTTTTTGAAGAGTTTGGTAATTATGATTACTACCGGGT ATTTCAAAAAAAAAAGCGTACAAGTTTGAATTGAGGTTGTGAGAAAGCTA AAAATGTTATAAATCTTAACTTTTTGCCATTAAATGGAGGAATGACTAAC TTAAAATTTGAGCTTTTGAGCTATCATACTTAATATTTGTTTTGCGCATT CAAAAGGTATTAAGAAAATTCGAAAAAGTTCTCTTTCGAAAAAGTCTCAT TTAATTGAGAAAATATGGGATCAAATTCAAGCTTACAAAACACTGAAAAC AGCTTTTTTTGCTACTTTTTTTAACACCGAAAGTTTTGAGGGCCTTTTGA ATGTTTGATGATTATCAAAAGAAATAAAAAATATTAATTACAGCCATCAA AACTTTAAACTGACTGTGTTTTCTTGCACAAAAGGGAAAGAGAAAAAAAA ATTGATCCACTCTTTTTTCTCAAAAATGACGCTTTTTCAAAAGAGAATTT TTTCGAATTATCTTCATAACTTTTGAACACGTGAAGCAAATTTAAAGTAT GATAGCTCAAAATTTAAGTTATTTTACCTCTTTTTAATGGTGAAAAGTTT AGATTTATAGCATTGTTAGTTTTCTCACAATAATAATTCAAAGTTGTACA CTTTTGAAACACCAGGTATATTCGTCTGGACACAGAAAAAATGCCCCTTT TTCCAGTTCTTTTGTCAGTGAAGGAGAAAGATTCTCAACCAAAAGCTTGG GAAAAGTATTTAGAAAACTTCTGGGAACCTTTCAAGAGTTTGACCAAAAG CTAAAGATACCTCAAGTTGATCTTTTCATAGTTCAGATCCTTTTTATTTT TCAGCTGGGCAATCAACGTGGCAACAATATGAATCGGTGCTCTATCTTCT ATCTGGTACAACGGGCACTATAGACAGCGAGGATAAAGTCTACATGCCGA ACATCATACAACTTCTTAAAAAAGTACCAAACCATCCGAAGATTCATGAT ACCCTGTACACTTTCCTGGGCGGTCTTGGAGAATGGTTAATTTACAATCA AAACCACATCGAAGATTTGCTACCGTTTCTGTTGTCTGGTATGAACGAAT CTAACAACCAAATCATGAGCTCTTGCAGTTTGTCTTTGCAAGATATTTGT CAAGAATGTGCTCAATTACTTAGCCGACAATCTGTTATGAAAGTATTACA AGTCTGCCGTGATACATTACAACGTCCGAATTGCCCAGCTAAAGTTTGTG TACGTTTATTTCAAGTGGCCGGATATGTGATATCAGTTCTACCAGCCTCT GAAATACGAAACGAACTTGAGATCATGGTTGCACCCTTGCTACATAATTT TAAAAGCTTGTTGGGAAGTAAAGCTCAAGGACCTGAGGTCGTAGAGCAGA TCTGCCATTGCTTAAACTGTTTGACAGCTATGTTTAGGTCTTTGGATCCT TTCGAAGAACAAGCTGTCCATCCCATCTCTATTGTTTATGAGCAATTATT ACAAATTCTACCTTTAATTAAAGGATACTGTACTGAAGAAATCATCATGC TTGCTGCTACGGGCTGCGTCTCAAAAGCTGTTGAAATTGTACGAGAAAAG TTGGCACCTTTTGTCAATGCGACTTGCCAACTACTTTTTGATTGTTTCAG TGCATGCCCAATGTGGTGTATAATGAATACAGCTTCCCTAGTTATTGGTA TGTTTGGTTCGGAAGAAATCACTTCACAAGCTATCAAAGAGTTCTTCGTT GCTATTACTACCTCATGTTTGACTTTGAACAGTACTGACAACACCGACTC CATGCAAGGTTTGATGGAGATGATGACCAAAGTTATCAGAACTGTACCTG AATTTTTCTTTGAGGGAACTGAATTTCAAGAAGTGTTGGTTAAACGTGCT TTAGAGTTAATGACTTTACAAGAGACTCCTACTATTAAGAGTACATGTCA CTTTGTTGTTACGTACCTGGGTGTGGTTTCCGTGTATGATACTGGCAAAG AAGTGTTTTTGCGATGTGGAAAAGATATTATTGGTCGGGTTTTACTTTGC ATTGGTGTTACTGCTCCTAGATCACTATTAGATAACTACTCAGATGTCTT GTTAGCTATTAATAAAAACTTTTCAACCGAAAGCTCTGTATGGTTAAATG AGTTGTTACTCACAGAGAATTTCCCCACTGCTGTACCTACTCAACAACAA AAAGAGTTGTTCCGTAAAATGGTGATTAAAGAACGGTCAAGTAAGAACCG ACTTCGAGAAACTGTTAGAAATTTTGCTTTATTATGTCGTGGTTTGATGG GACTGACTTATGTTCAATGAAATATTATAGGAACGTTTAACAAGAAGAAA TCCCTCTTTGAAGGGAAATTGACTAAAATTGCGATGGTTTCTGTGCAGTC AGCAGATCTTATTGGAAAAGTTCAATTTTTTGCATCGCATTCTTCGTTTG AAATGCCGAAAATGTCATATTTCTTGGTACTAATTTTTGCTTAACTGCAT AGGCATTTTATCAAGAGCCGAAGCCTGTATCTTACTATGGCTCCTATGCA AGATAATTTCATTTCTCTCCAATTTTATGAATTTTAACCCGATTACTCTC CACCTCTACAATTAAGCAAATAATAGTATTTTGATTTTTGATAAATTTTG AGCCTAACTTTTCATTGTTTATACATACCATGCATCTGCATACATTGGTA AGTTTTTTCTTCGGTTTTTGGTATTTATCTTCATGTTTTAGCTAGAATTA GGGTTTATTTTTTTTCTATTTTTTTTTCTATTAAATATTTTTCTATTTTT TGTTGTTTTAAATAATCTATTTTAATCAAAAAGATTTTAGAACCTAGAAC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00047077TCONS_00047077Clytia hemisphaericatranscript
TCONS_00047076TCONS_00047076Clytia hemisphaericatranscript
TCONS_00047075TCONS_00047075Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00047075-proteinTCONS_00047075-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_120supercontigscaffold_120:412342..416691 -
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
IPO13importin-13 Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
4.15 3.99 2.33 2.2 22.59 16.8 15.59 17.4 5.36 10.53 9.14 4.57 6.4 4.52 5.51 9.52 9.24 8.1 4.12 4.47 6.14 5.02 18.99 16.8 6.92 9.79 13.23 8.41 18.03 19.6