XLOC_030032 (gene) - C. hemisphaerica

Overview
NameXLOC_030032
Unique NameXLOC_030032
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_121:50904..56080+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_030032 ID=XLOC_030032|Name=XLOC_030032|organism=Clytia hemisphaerica|type=gene|length=5177bp|location=Sequence derived from alignment at scaffold_121:50904..56080+ (Clytia hemisphaerica)
taaagagatagcccaaaatcggctttttcgcccgaactttaaatctcgaa aaacgtcaaaataaccggaattctcaatatatttcttgaaagattgtagc AGGTCGCCAGGTGACATAATTTAGTGTTACTGTTTGAGATTAAGTTTTAT ACCCTccaaggatcatctgtgccaaatttcatgcttttatcacgaactga agtatttttgtgccaACAGACCTCACTATTGCAAAAGTTTTGTCATTGAT AACGTTGTGAAAATTTAAACAGGCTTAAAAGCTTATTATTCTAATCTAAA CCTCGAAACgataattatatttttgtttaatcattaaaaataaaatcaaa atcacagaagttttttggaaaaacatgatcacccttcatatattcatcaa agaaaataaaccaTCCTTTCTTGGTTCTCATTTTCATTACAACGATCCAA ACACCGAATTTTAGGAGCCGCAGTAAATTGTACCCAACCACAACGACACC GGGTACTAAGAGCAAGATCTGAACCAATACACCAAAcacaaaattagggc ttgagtTGTCATTCATTTTGAGGACAGACATCTTTTGTTTGCCATTACTA ATGATTCCAATAGCGCAGATTAGGAATAGGATAAAGGTATCGAACCCGTT GAGGTACATTTTCTGGCCGTCAATTTCATCTTTGTAGGGTTTATTGGCTG CGAAGATGACGAGAATGCCAATCGAAAGCACGGTTAGAATGACCAAACTC AACTGCTTGTGTGGGTTGAAAGCgactaagaacattgaaatAAGATCGAT AACGATTCTTATTACAAGATAGTAAACAGCAAATCCTGTACAGTCGTCTC TGAACGGTTCCTTGAAGACGTCCGTAACATGTCGATTTGCAAACACCTTT TTGATACTTCTGCACGAGCATTTGTCAAGGCAATCACAACAAGATCTATA CCGCTTCATTTTTCGATAGAATCTATCATCGATAACAAAAGGATACATGC TAAACATGATAAGCAGAAGGGACGCAATAATGTAATAAGGCCAAAACCAA TCTGATATTTGTTTAAACTCCGCATAATTGAACAATCGAAATTGGTCATC AATATTGACAAACTTCAGGGCATCGAAACAAACTTTGACTATAGAGCCGT AGGTgtacaaaatgataaaaacggCTGCTCTGTACCCATTCTCTCgttta aaaacattcaagaAAGTTCGTGTTTTTATACTTTGCGGTTGTTGGTCGCC ATTTTCATCGACATTTTCAACGGGTGTGTTTTTCTTTGATAACAAACGCC CTCTCAAGTACGAGCAAAAGCAAACACAAATAAAAAGGTTGACAAAAGTA ACCAATAGCACAGCCAAGTTTAGCATTGGTTTATAAAAGTCTGTGAAGTG TTCACCAAGACAGGCGATCCCTTTGTTGCTACCAATTCCGTCAAAATTCA TAACCTCAATGAGAAACGCAATGAGGGGTCCAATATACGAATCATTCATG GAAAGTTGAGTTGTTGTAAGGAAATTACCGATGActtgataaaagaaaaa tacGGAGTTTAAGTAGCAAGTATAAACGTCAATATTCGATAAAAGcacaa ttaaaacaaaaatcaaatcgGCAACATAAAGTCCAATAATTGTAAAAGCA AGGCTCAATTTATCTACACCACATTCGTCCACTGGCAAACATTTTTCGGA GCCCCATTGGAGGGTTGTTCCATTTTTGCACGAAGAACATAATGTAGAAT TTTCATCTCTGTTTTTTCCGCATTGTGTTTTATTTGGATCGTATTTACAA TAAACCCAATTTTCGTCTTCACGGTCGCATAATCGACAGTAATGATTTGG ACATTGAATTCCTTTTTCGAGGTCATTAACGATCTCTTGATGGGTCGGTT TAAACCAAAGATTGGCATAAGTATAAATGTCATCTCCGATACACAATACT ATCCCCCTCGCTTCGTTTGTCTTCGGGTTACATTGGCATACCCCGTCTTC CAATACTTTAACAAATGGACAATGGTCAAAACGTCCTCTCTTTTGTTTAG GTTGAGCAGCGTTAGCATTCTCTAAAGAAAAGACTAAATCGAATAGTGCT GGTTTGTGACTTATTTTGAGTGTCAGTTCAATAGAGTTGTTACTGACAAT AAATGctttgtaattatttttctccTCGACCTGCACACCTTCGGTCTTAG AAATAATATCCATGTTGACAGTCGCCGATACTGGCTGTCCGATCTCATCG CGAAGTTCTATGGGCACGGTCATTGTTGTTCCAGGGTACATATTCTGCCA TACTTTATTGTCTGGGATGTAAATTTCAACCGGTTCTGTAGCTATAGAGT TCTTTGAAGTGAAGTTAAACTTATCTTTATCGTTGAAAAAATCAAGTAGA TCGGCCGATTCTGACGATGACGAGCATGTTCGTAGGCTGGTTGTAAAGAT GTCGTTCTCATGCCCAGAGAACAGGACCGCTTTGTTATTATTGAAACGTA CTCGAGGCTTCCGTCCATTGACTGCTTGTTCCATAAATTTAAAGAAACAA GGGTAGACTGGTGTAAGATAGGTTTCCCATTCACCGATTAATGGTCCGTT AAAATCCACGGAAATTCCGGCACCTTTGTTTGCATTATTACTATCAATGT CTAAGAAAGCGGTGGTAGATTCAATAATGATTTGTGATCTTCCATGAAGT GCCATTCCACCTCCATTAATACCTTTGTTTGAATATAAATCAAGGTTTCC TCGGAGATGAAGGTCTGAGAAATCAAGTACGATACCAGTCGCATGGTTTT GAAATAGATAAAATGCATCCTCACTTGATGTGCTGGTCACCAATAGATGC GACTGGTAGGCGTAGATAGCACCAAAACCAAGAGTTCCGTCTTTCGAAGC TGTACAACTGTTGTCTATCAATCCGACTTCACCAAAGAATTGAACATAAA CGTTATCAAAAAAGAGTGCAGATccaattttggcgttattatgACTGATT TGGCTTTTTTTTCCTCcgtaaaagaaagtttttactAAAGAAGGATCAAA TTGACTACGATGAATACCAGTTGATTGTTGTTTTCGTTGGCAAAATGCAC CACCGTAACCATTGAGAGCCGTATTGGAAGATAACTCGTTTAAATTGTCC ACAGTAAAACTATTATCATTCGTATGCGAGTATTCGACTGTGAAATAGAA GAAAGCACCACCAGAGAAAACTGCTGTATTGTGTGTACAGAAAATCTCTT TTACCAAAATACTGTTATTGGAGGAATCGCTTCCGTGCTTCACGTAAATA GCACCCCCGTACAGTGCTTTGTTGTGAGTGATCCAAGTATCGTCATTTAT ATCATCGTTTATAATATTGATTTTGTTACCCGATGTTTTGTGGAAAGATA AACTGATAGCTCCTCCATATCCGAATGGTTCATATGGTTTCGATTCTTTC TCCGGAGCCGTTTCATCCGGGTAACCAGTGAGgtttttcaagttggtatc acTGATGGTGAAAAATGCTCCTTTTAATGTTTTACGAGATATATGTCGAA ATAAAACACCTCCCCCGTAAATTGTTCCTTTTGATGACTtctcaaattga aaataaactgGCCTGTTGCTTTGTAATGTTGATTTGGTCAACGAAATATG CCCGATACAGTCAGTCATTGAGATACCATAGCCGTCATAGGAGTTCATGT CGATGCTATTGAGGGTGATATCTGTCACGTTTTCAAAGTGGAATACAGCT GTGATATCAACACTTAATAGTGTTTTGGAATTCATATAAAATGGATCGTT ATGTATATAAGTAGATGTTTGAGCTCCTCCGCAAGGACCATCGAATTTGA GGTTTTCAATCTCGATGTTATCTCCGtaaatgaaagacaaaaattGACCA GGATTAGAACCACACTGAAAGGTGAACATGTCGTGAGAagtgattttcaa ttttcgtgCGTTGGAAACGATAGCATTTGTAAAATGATGGTTAGCATCTT CGGTGATATTGACGCAAGTATCTGTTAAAGGTTTCTTTGGGTAAATGGCA AATGCAGCTTCGAGGGAATGACATTGCCAACGATTGGGAGTTGATGGATC TTTCTGGCAATCGGTAACGTTTGAAACTATGTCTATGATTGTGTTGAAAC CATCACAATTCGATGTTTCTTGAGCACGAGATGAAGATATACACCATACG GTTAAAAccagtaaaaatatttcactttttaaattcatttttctttagCA TCTTAAACGAGAAGATAAATTAGTTACTTGACTTGAAAAACACATAGAAG ACAATCAAACACATTACAgactaaaattttcttttttagaccACAGGGCA TGAATTGAAACTGTAAATCNTTTCTCCGGAGCCGTTTCATCCGGGTAACC AGTGAGgtttttcaagttggtatcacTGATGGTGAAAAATGCTCCTTTTA ATGTTTTACGAGATATATGTCGAAATAAAACACCTCCCCCGTAAATTGTT CCTTTTGATGACTtctcaaattgaaaataaactgGCCTGTTGCTTTGTAA TGTTGATTTGGTCAACGAAATATGCCCGATACAGTCAGTCATTGAGATAC CATAGCCGTCATAGGAGTTCATGTCAATGTTATTAAGGGTGATATCTGTC ACGTTTTCAAAGTGGAATACAGCTGTGATATGAACACTTAATAGTGTTTG GGAATTCATATAAAATGGATCGTTATGTATATAAGTAGATGTTTGAGCTC CTCCGCAAGAACCATCGAATTTGAGGTTTTCGATCTCGATGTTATCTCCG taaatgaaagacaaaaattGACCAGGACCACACTGAAAGGTGAACATGTC GTGAGAagtgattttcaattttcgtgCGTTGGAAACGATAGCATTTGTAA AATGATGGTTAGCATCTTTGGTGATATGGATGCAAGTATCTGTTAAAGGT TTCTTTGGGTAAATGGCAAATGCAGCTTCGAGGGAATGACATTGCCAACG ATTGGGAGTTGATGGATCTTTCTGGCAATCGGTAACGTTTGAAACTATGT CTATGATTGTGTTGAAACCATCACAATTCGATGTTTCTTGAGCACGAGAT GAAGATATACACCATACGGTTAAAAccagtaaaaatatttcactttttaa attcatttttctttagCATCTTAAACG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00047105TCONS_00047105Clytia hemisphaericatranscript
TCONS_00047106TCONS_00047106Clytia hemisphaericatranscript
TCONS_00047107TCONS_00047107Clytia hemisphaericatranscript
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_121supercontigscaffold_121:50904..56080 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.92 1.16 0.52 0.78 1.99 2.04 2.85 3.83 1.72 3.46 2.37 1.14 3.53 3.39 7.15 5.61 4.35 4.32 5.39 5.08 2.52 3.08 2.65 4.46 7.27 6.96 4.48 4.92 5.01 5.2