XLOC_030085 (gene) - C. hemisphaerica

Overview
NameXLOC_030085
Unique NameXLOC_030085
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_123:245027..248420-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_030085 ID=XLOC_030085|Name=XLOC_030085|organism=Clytia hemisphaerica|type=gene|length=3394bp|location=Sequence derived from alignment at scaffold_123:245027..248420- (Clytia hemisphaerica)
TCAGAAAGAACAAAATAAAATAACTATAAAAACAAAAATGAGCCAATCAC
AATTACAATCAAATTTACCATCAACCAAACCATCAAGCTATTCGGACTAC
GCACATATTAGCTCTCAACATCCTCCAGATGATGACATTTGGGGTGTATT
AGTCCCCTTGCAACTTAAGAAGTACGACACTTGTGTTTTGACGGAAGATG
TCGTATCTTTTGGTCGTCTTCCAGACAACACATTTATGTTTAGTCGGGAA
AGACACAATTTACAACAAAAGGTTTTCGATAACATCTCCAAGACACATTT
TGTTATCAAACGTGATGATAATTCATCTAAAGTCACCATTACTGATAAGT
CTATGAACGGGACTTATGTAAATGGACAAAAGATTCCTACAGACAAACCT
TTTCCTTTACCCCACCTGAGCGTTGTCTCGATGTCTGTTACGAAAAATAA
GGTTTTTCAGTTTTATAACCGAACACAACTGAAACTTCTTTTTGCATCAG
CTCCGAGTGATTTTTTCAAAAAATACACATNTACAACAAAAGGTTTTCGA
TAACATCTCCAAGACACATTTTGTTATCAAACGTGATGATAATTCATCTA
AAGTCACCATTACTGATAAGTCTATGAACGGGACTTATGTAAATGGACAA
AAAATTCCTACAGACAAACCTTTTCCTTTACCCCACCTGAGCGTTGTCTC
GATGTCCGTTACGAAAAATAAGGTTTTTCAATTTTATAACCGAACACAAC
TGAAACTTCTTTTTGCATCAGCTCCGAGTGATTTTTTCAAGAAATACACA
CTAGAGGATGAGATCCTGGGTAAAGGTGGCTACGCTACGGTTAAGAAAGG
CTTCAAGAATCAAGATTATCGTGATAAGGTTGCCGTTAAAATAGTCGACA
AAGATAATATACGTAACCGTTGTGGAAGTGAAAGAGACTTTTCGTACGAG
GTCAATATTGTTAAAGACTTGGATCATGAAAACATTGTGAAAATTCGCGA
TTATTTTGAAAATGATCATTTCATATACATTGTAATGGAGTTGGCATCAG
AAGGAAGTTTGTTGGGCTATATGCGTAAAAGGCGCAGCGGTGTCATATCA
GAGCCATTATGCAAAGACTTTTTTAAACAAATTTTAATGGGTGTTAAATT
TTTACACGAGAATAATATAATACATAGAGACATTAAAGCAGATAATATTC
TTTTACACCGTAATCCAGATGTTAGTTTTGTCGCTAAAATTACTGATTTC
GGTGCTTCACGTCACTTGAGTCCACAATCGCAATGTCTTTCCCCTGTGGG
AACCGAGCATTATTGGGCCCCTGAGGTCAATTCTGGCTTTGGTTACACCA
AACAAGCTGATTTATGGTCATTAGGGTGTCTCCTATTTGTAATGTTGTTT
GGTCAAACCCCTTACAAGCAAAAGCCAAACCATGCAGTCATCGAATCGTT
AATGGATGATGCAAGACTTGCCAATAAACCGTTAGTGAAAGATTTATTGT
CGGGCTTCCTGAAGATGGATCCAGAACAGAGACTTTCTATTCAAGAAGCC
ATACATCATGATTGGTTTCATCAGCAAGAATCTGTAGAAAACCCTTCGAA
ACGACAACGTGTTAAGTAATGGGTTTTGATTTTTATTTTGAATTTCTTTA
CGGCGATCAACTTTCCTCTAGTTTTTGAAAGTTCTGTTTTAGATATTTTG
TTAATTTACCTAGTTTTTTCTATTCACATACGCAAGTCACTTTTTCACGA
CTCACGACAGCCATGTTTGTTGTGTGCAATATTGATGGTTTTCCTTTTTA
TTGGACTACACTTTGTATACTGAGCTGGGTATATGGTTCCTTCTTTTTAA
GGAATATTTTTCTTTAGGGAAAGTAATTTCTCTTTTCAGTCCTAAAATTC
ACCGCACACTTTAGGCGTACAAAATTTCGCGAGCAGAAACTTTCGCAATT
TCCGCGAATTTTGGCCTTTTTCGCGAAAGTAAATGTCTTTGAAAATTCTT
AACACGGCTATTCGCGAAAGTTTATGCTCGCGAATTTTTCAACCAATAAG
ACTTTTAATAATTTCGAGGGTAAAACAAACACTATGGTTTAACTCACTAA
AAGATTATGTTTACGGAAAACACATAATTAATCTTTACTTAGTAAGTGTG
TTCTTTTGTCAGTTCTGACGTCATGCCGTGGCGAAGAATAAAACCTCCTC
GAAATTGTAATAAATATCAAATTTTCGGCATATTATTATCCTTTAATGCT
TTTTAAAAGTCGAAGAGCAACCGTCTTAAGCGGATTTAAGGAATATTTTT
CACTTTTTAAGGCAATTCTTATTCGAAAATTCTCATTTTTATCCAACGAT
TCGCGAAAGTTTATGCTCGCAAATTTCGCGATTTTTCGACCTCGCGAAAG
TTTCTGCTTGCAAAAGTAGTAAGACCATATGTTAGATTTTAGTTTGCTGT
ATATTTTTTATCGTTTATCGTTTAGGCTTTTCGTATTTACTTTTATTTGA
GACTCAACTAGGTGTAACGATTCAATTTTTATTGTGTTAGTCCTTCTGAC
CCTTGGTTCGCCCTACATTTTATTTTTCAGAATATTTTGCGAATCAGGCT
ATGTGGGAGATAATGTTTTTTTTATTGAAAATTTATTTTGTAAATGAGGG
GAAATATACCAGGAAAGGTTAAAGACGAAGAATATAGTGGGAGGTTAGGT
TCGAATCACCTATGTAGGATTTGAAACCGGATTTATTTTCATAGGAGTTG
CGTTGTCCGTGTGATTTTCATACAAATGCTAGATTAGAAGTAACATCTAT
AGAAGATTTCAAAACACAAAAACGAAGATTGTGCTAAAGTCTTTCTCGAT
AAAATCTGCAGTAGAGACAGGAAAGGCTCTTACTTGAGTTCGATTTAATA
AAAGTGGTTTTGGGCTTGTTGAAAAGATATTCAAGAGTGGAGTATAAAAA
AACATTAGAATATCGGATATGAAGATGAAAACATGAAAATGAAAAAATAA
AGAATAAAAAATGAGATTCGTGAGGAAGTCGGCTTCGGTTTTAGCATTTT
CCATAATCTTCGAATATTATCACTGTTGAAAAATTGTTCAAAAATATTGT
TTCAAACACTCCTGATTATCTTTACAATTAGTATAAAACCGCCATTTAAT
TCGAATTCTCTCAAAAGTTACAGCCTTTTTTGCCTCCGCTGCAGATTATA
TTGAGACAGACTTTAGAAAACAAAGTGCTAGATTCGATAAACCTTTTCAT
AAATTACGTCACGAACATCACTTGCCTCGTATTCAAACAATTACCATGGA
GATTATGTCCTTTGAGACAAATAATTCTTTTTATGAATAGAAAGTAGTTT
TAATCCGTTGGGAGTCAATGACCTTGGCAATAATTTCAATAGTT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00047232TCONS_00047232Clytia hemisphaericatranscript
TCONS_00047231TCONS_00047231Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00047231-proteinTCONS_00047231-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_123supercontigscaffold_123:245027..248420 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.53	1.44	2.41	2.76	7.86	4.89	6.8	6.21	3.39	4.91	4.54	2.54	4.35	2.94	3.9	4.91	4.54	4.25	2.15	1.93	3.22	3.1	2.45	2.75	3.32	3.91	2.69	2	2.37	2.05