XLOC_030212 (gene) - C. hemisphaerica

Overview
NameXLOC_030212
Unique NameXLOC_030212
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_128:94617..104711+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_030212 ID=XLOC_030212|Name=XLOC_030212|organism=Clytia hemisphaerica|type=gene|length=10095bp|location=Sequence derived from alignment at scaffold_128:94617..104711+ (Clytia hemisphaerica)
TTCACTTCCCCCTCCAGGACAAAAGTTGAtccccccatcttcctgggggg
gggggggggtcccaTGCGAAATCATACAATACAATTATCCACTTATTCTC
GTTTCTTTCAGCAATTACACGGATATAATAATTACGAAGAACTTCTACAA
TTACAACAACGAGCTGTCCATATGGTGAGTCTACTATATAATTCTTGTTG
ATCAATTTtacttttcaaccctttttttCCCCATTCCGTCAATATTTCAA
GCATGTCTCTGCATTGGAGTCTCCAATAAATCTGATAAATATCGATCACC
TTCCCTAGAATTTCTCTTTGTTGAATAGAGAAATAGCCAAGCTCTGGATT
AAATTTCTCTGGTCCCTTGCGAAGCTGCCGCATAGAGGCTCGTTATTTAT
TAGATATTTATTAATCAAAGGAGGTGAACTCATAGTCAACAAGTGCTCGA
TAAACCGACCAGGAGTAGAGCTtcttcaatcaaaaaatatttatagatAT
TTattagatatttaaaaaaagaattatttttgagGTTTAACTCAACTTGG
AATATTCTCAAATGTTGCAATTTGGTATGCTTGGAGCTTTCTTTGGGTTT
ACTTTTAGTTGATAAGATAATTAGATAATTATTCAAGGTCTAGTTCGATA
TTTTACCCAAAAATAAATACAGTACCCAAAtattaaatcatgttttcaaa
atcaTCATATGACTCATATGACATCATTTTTCTCTGCATGAGCACCGGGG
TTTTTCCCTGCTTACGTATATCTTCAATTgaactttttgcaaaaatgctg
aaaaattgcTGATGCAAGTTTATCTCTGGTATGAATAGAATGGTCAGATC
ACTTTCATGTGTCGGTTCAATAACATTGAATTATTGATGACGAAGTTTCG
ATTTTAAATCAATTCCATTCATATCATATCTctcttattttgataatttt
ccatcttcagttttttataagaatacttttTGATAGATTCCACTTTGCTA
AGATTTCAATTATAAATCTTGTCAATTAGTCAGGTTCTTTCTCTTCGACA
TAACTGGGAAACTGAAGGTGTATGTGTCACCACAGAAATAACTGACTTGT
GGCAGCCGAGCGTTTATAGCGACCTTGCTTTTCGATCATTCGATGTTAGA
TATCTAAGTGTGTCAGTGTTTCttaaatgttttaaacgaaaaacTTGAct
ttgttttcttataaaaagacattTTACCTCCCTTGTTTTTTATCTGGAAT
ATTTTTTCAGCATTCAATGTGGAACCATTTTCGAATGTTGTTTTCAAAAC
CTACCATAACATTTCCGACCGTTTAGTTTACAGTAAAACTCTGTAAATTT
GttattaaattttaattttttgatcaCTCGACGCGCCGATTGTAAAAATA
ACATCAGCAAAACAGAATACAATTTTCAGTGaattttcaagcattttttc
tttttgaagaacAACTTCTAATCTGTGATAAAGTCAAATTAATGAGCTAC
AGAAACGGACTTTCTAAGAGTGTCAAGGTCAAAATGACCTTATCTCCTTC
AATTCTCCATAGAAAATTTCCCCCAGCTTTGCAAAAATCCCAAGGTGTCA
tatgataagaaaataaaataaaaagaggtAGAAGCAAAAAGCTCATTTAA
TCAACGTTTTATTGAACTTCTTTCTGAAGCGTGGTATTTTGATAATGATA
GGCTTTAATGATACAAAAACTAATTTACATCAACTTTAAACTACctctaa
acaaaaaatatttttttaaagcaaaaatttcgaatATCGAAAATTGTAAA
TTGCATAATTTTTAACTCTCAAGAAATGATAAATTAACCATCATAAAACT
GACATAACATAGTGAAGAATTATTTAAAATAACAGTCAAAGCTAGGAGTT
AATAGTCTGATTTTTCATGTTTCCCTATTCAACAGTGGtcaatttttgga
atatttttcccaGAAGCGATCACCAATCTTTGCCAACAGACTTCCAAAGA
ACTTGCATCTCAAAGAGTCTTCTAATTCCTTCCTCAATTCCTCTTCGCTC
TTCGATTGGTTCTTATTGTCCCCTTTACCGCCACCACTACTACTTCCGCC
ATTATGGGTGTGGTCGCCTTGAGCATGTTTTTGTGAGAGCTTTGTTATGA
TGGAGTTGATTATCTGCTCTTCTTCCTCTGTATTATCCATCTTTAATGAT
TCCAAGAAACGACGGATTGTTGCTATGGAGAACATTTCACcttctttgat
gttttgaaaTTGGTTTGTTGCTTTCTCGCTCAAAATCTTCTCAATTCCAA
TGGCAATTTGATGTAGAGCTGATCTACGTTTTGTgttattttctaagtct
ttttcaACAAGCCAACAAACAAGTCCTTGGTACTCAAAATCTGACTTTAT
CGAATCCACTCCTAGGGCCTTCTCTCTCCTACTATGTCTTTGCCAGAAAT
CTCGATCCGCAATCTTTTAGTCTCAAATTCCAGTTTTGAGTTTTCCCAAT
CAAGTGCTacaattttgatattcttatttCATCTGCTATATAATAACTTC
CGTCCGATTTCTGTTCATAAGAATACCTTGAATCTTGATGCATACCCTTG
CCGTAAATGGCAAGTTCTCTACAAAATTTCTGATATTAAACTCAAGAATG
TGTACTGTTCTTTTCGCTTGCTTTTTAAGAtatgattctatcaaaattgc
tttgctttgtttttatttcgttcttttacccccttttttgtaaacttttt
ccCGGGTGTATTTCTCTATTCACATTCAATAAATTCGTAATGCTGAATAG
AGTATTCATATACGAAAGTTCCTATCAAAATAGGTTTCAatacaaaaaaa
gttagttgcTATTTTGTCTCTGGGAAAActtcaatttttcaacaaatatt
tttatgactCACCCCAGTTCCCGAATTTCCCGATAAACAATCGGATTCTT
TTGACACTTcgcatttcattttcaattacaTAACGGTTCCTGTTTTGAct
ctttaaatttttgtttttcattttcttcaaaatttataCCTAGGTCAATG
TTTATTTCCACGTGGCCACATGACGTATGAACCTaacccgggtttttttt
ttcgtgcTAAATTAagtaaattaatgaaaaatcaggaaacatatgaaaaa
aactttgaaaaaattattgcctACGTAATTAATGCTTTTATGAAAGTAAT
ATGGTTaagaaacaagaaaattgaaattttcattacaGCCTCAATCACCA
TACCATTATGATGTTTCAACGATGTATCCAACGCCTACAGCTACTGCTAC
AAGAGAAGGGATCGCTGGTTATCAAGGTATTCAACgtaaaataaatatat
aaagcaaaaattaaaaaaatgtggTGTTTCCGGAAaacggccgggtgaaa
aaaagattttttctgacccggccgcagacttgATACATTAGGGCTTACTT
ATattattcagggcttacttcatactgtttgtacataaaagtcatcaaaa
gttatcaaaaaatagcaaaaaaaaagatttttttccggccggccgcatga
gagcttttttccttcacccgcattccggaaacactacattttttggacct
accccggtggggtggaggtcctataaattaacccatgttcgttcgttcgt
tagttagtgtgttagttaccagcttttctcgagattggctNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNtattttgaccagttatgtcttatgtgtttcattg
tttcaatgttcactgattagtttgataaccaggtaggtccataaaagtat
cgcttgtttatTTTCGCCTAAGCAAAATTTCCCGATTTCGAAAAGTCTAC
TCATCTTGAAatatataccttattacacgaatattactagtcattttatt
aacacgaattgaaaaatttcttgttaataaaaaccccccttaattaaaac
cagccgtggtgtccttgaaaaagcacaTTAGAatcgtgttaattttttgc
gtgttaatttcaaggccgttgaatccTTGCCtatagtaatattcgtgtaa
taaggtagttaTGATTTTGATCATTTCATTTCGTCATAATGCTCTCAATA
TAATGTATGTGGGCGACTCATCTTACCTAACAATGCTTAAGTCCCTTAGA
CGAGTTTCCCTTACACTTTTTAGGGACTTAGTGGCCTGAATTTCAGTCTT
CATATGTGCTGTCgtttatacagtggagtctccataactcgaacagggaa
cacaaatttgctTGAGTTAAGGGAatctcgagttatggagtaaggtatAT
AAGGCATTGCTAACTGAATGGagcataaaacttgttcgagtcaAGGAGAC
GTTCACTGTACTTTATAAATGTGAagcaaataaaactttttgcgTCCTTT
CAGGCGCAGAAACTAAATTTGCAAGAGCAAGTGGAGATGAGACGACTGGT
CTACATCAAGGTAAGGGGAAATTTGATAGTCCTCATGTTATAATTAGATT
GAATAGCAAACACAAGTTTGTATTTCTtcaaatgggctcttccagaaaaa
aattcgttcatgggcgtggaggatatattattttttcaatgatctacccc
tggatatttcgatttttcacccccttGACACGcgttttacccctggacaa
gcatcaaatcGACTCCCTGGACGCTAAAATTTACCCCGTGACATTACAAA
TTCACCCCGTGGACATGCCAgttttcaggattttttcgATACCCTTGGAC
AAtatatcttccaccccctaTGAAAGgctttttctggaagagcccaatag
aAGAATTTAATTCGAGGCTTTTCAATGAAATCGTCTTTTCCTTCCTGTGT
TCACGACTCCGAATATATTCATCAATTGATTTTCAATCTAAAATATGAAA
CGATCTTTCAACGAGAAAGGCTTATAAGCTCTAGTGTAATTAGTCGACTT
TCTGCCTATCGTAAGCGAAAAAATGGCAGAAAGTTGCCAGTTGAAATCTA
TACTTTGAAAAGATTAAAAGAAGTCATTGCGTAAAGGTCAAAAAAGGCCG
AGGCATTGGCTTTAGACAGTCAACTCTCTACCCTCATTAAtgcacaatta
gaataggcagggagAAAATTGATATGTCTAAACTAGAGTTATTATTTCGT
TGAGATTGTCAAAATCCTCTAACATTTTTCATCCAATATCTTTTAGCTAA
CGCACACGTAGCAGCAGGCAACATAAACGCNggttgaaatttagcaaaat
caaaaacatgaacgaaaaaaccgacaaaaagcaagaaaaacaatcatttg
aagaagctaaacaaaaccaaacatgcactcctacctcctgctcagatgac
gatgaccaaaaccgtctaaaatgccgaaaatgccaccgcatggtacacta
cgagtgcacacaattaccGCTTTATCAGCTGNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNGTGTTCACGACCCCGAATATATTCATCAATTGA
TTTTCAATCTAAAATATGAAACGATCTTTCAACGAGAAAGGCTTATAAGC
TCTAGTGTAATTAGTCGACTTTCTGCCTATCGTAAGCGAAAAAATGGCAG
AAAGTTGCCAGTTGAAATCTATACTTTGAAAAGATTAAAAGAAGTCATTG
CGTAAAGGTCAAAAAAGGCCGAGGCATTGGCTTTAGACAGTCAACTCTCT
ACCCTCATTAAtgcacaattagaataggcagggagAAAATTGATATGTCT
AAACTAGAGTTATTATTTCGTTGAGATTGTCAAAATCCTCTAACATTTTT
CATCCAATATCTTTTAGCTAACGCACACGTAGCAGCAGGCAACATAAACG
CCCAACATGCCCAAGCCTATATGAACGCAGCCGGTCAATTACCGTATGGT
TTCACGTATGCTTACCAACCCGGTGTGATGCCAGGCCAAGCACCAGGCTT
GTACCCAGCTTTCACTACACCAAATGTATATGTAAGTTCAAACCTTTACA
CAAAACTTATCTCGCACTTTCACGCTCTTTTTCAGTTTGGGGGTACAgtt
cacagatttctgtaaagcccgaagggctagatgtcgtgatGGGTAAAGGT
GGTCTAAATAGATTACGACGCCCCTCAAAACAACATCACAAATGATGatg
ggctagatgtcgtgcttttaagctctttcaagcaaaaaaaaaaagaatat
cgccaaaatattgctgctattgttttcgaaaacctgcggagcttcttatt
ggtcaagagctgaaattctattgtaatgtcacgtgacctaggcaggattt
cctacctagccTCGGCAcagttttcagccaaagcacgacatctagtcctt
cgggttttataaatctatggtacAGTTAGCCATAATATCACTCTTTTTTT
TCTCCAGTTGAACCAAGCTGGAGGAGGTAGCAAAGGCGTGGTTGGTACGC
AATACCAGTCGCAATATACTCCACAGACCTTCAACAGTGCTAAATATTCA
GGTTCTGGAAACCATGATTTCAAAGGGAATTATCACAACAGCTCATCACA
GACTACCTTAACAAAGAGTGGAAACCCATCTGGTAAGCAACACTATTTTG
TTAACAAATTTCATGTAGTACTTGTAGAAACTtttgttttataatttttt
agaaatatttcNTCATGTAGTACTTGTAGAAACTtttgttttataatttt
ttagaaatatttctaaacCTGGTATTTTTTCTTGATATAGGAAAATGAAA
TAGAGGGAGGTTAGACCTTTTAATCAATTActttacgaacatcacttgcc
ctATTCAAACAATTGCCAtagtgattatgtcccttgagacattaaatgat
tttttatgaacagAAAGTTTcatagttttaataaaatccgctgggagtta
atcaccatggcaataaattcaaaacgaggcaagtgatgttcgtaacgtaa
tttatgaaaagatctattCTGAAATTTTCTGGTGTTTTCGGTAGGATATA
AGACGTAAGCTTGATTTGTTTCAAGAATTAAAGATCATAAGGCATAATAg
tggaaaaaatttttcttgatgtttttttctttttttcagtaaATAGTGGG
AACGATAGTGGTCAGAACAATGCCTCCTTCAAAGGGCAAGGGGTGAGTTT
TTAAAACGTGTTGAATTTGTATGACCAAGTGTCTTTATTCCCTCGCTCAA
TGCACTACACTAGGTTGGCACGGAAAGTGTTTTTATCATAATGATTACAA
TATTTTTCCCTTGGACATTTCGATCCCCCCGCAAATTCACCCAATAGGCA
ATAGAGATGGgagtttttcagtattttttcgATACCACTTGGGCACTATA
TCTTCCACCAACTGTAACCCaggttttttctggaaaatccaAATGAAATG
ATTTTGAGATCTCCTAAGGCATGGATTACAATTttgttacaaaaaataaa
acatccAATGTTTAACTCTAAAACTCTGGTCAAGGTCCGTCCATCTGATT
TATCATCTGTTTTAAGAGAATACGAACATTTCACTTCTTCTTCTACCTTT
GTAGTATAATGATGGTAAAGCCTTCCTTGGCACGAGTCCATCATCGCAGC
CTGGGATGACTTTGCACGGTCAAAACACTCATCTCAACCCGTACTTGTTG
GCCCAGCAACAACAGCAGAACAGCCTACTGGCTGGCCAagtttcagccaa
tcagattggTCATCAGGGTAGCCATGACAACCGATCTGGATTCAGTGGTA
GTCAACAGAAACGGGAAGGGAAAGGATCATATCAATCTTACTGGTCTGGT
TCAAGATGAGATGACGTCATCGCTGTCATCTTTGACCTGGTTTCTCGGCA
TGGAGCATTTGGTCTGGTTTCCACCTGCTTTTATATTATGGATGGGTACC
TTTTCAACAAATTCATTCTCTGGACTTGAATTTTTCTATTAAtttaaaga
aaacgaaaaaatttTTGGGACAGAGTGGATTTTTTTTaaccagaaaaaaa
acataagttgttgttgttatttaCGTGAGAAAGATAGAAAGAGTATTGTt
tattatgaattttttttgattttttttgtatacATTTTTTGGAACACATT
TTCAAAGTGTCTAATATCTTCGCCCCCGGTTCtgtctttatttttcttgt
tttgtttaTACTGAAGAGGAGAACTATCATTCTcgtgtttttgttctttt
tttagtttttttttgtcattttttcacTAGTAGTGATTGACAAAAGAATA
TACAGAGATATGACTATATGTATATAGGATTAACCGCACCAAACCCGCCC
ACAGGttcgaaaagaaagaaaacacaaaagaaCAACTTCAAAATT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00047442TCONS_00047442Clytia hemisphaericatranscript
TCONS_00047443TCONS_00047443Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00047443-proteinTCONS_00047443-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_128supercontigscaffold_128:94617..104711 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
155.1	138.12	133.65	128.11	35.67	27.71	57.92	64.47	50.24	60.08	77.63	64.31	140.2	156.09	129.53	120.24	92.04	106.87	141.09	122.87	99.76	112.88	94.56	101.24	144.32	149.84	63.09	97.85	63.65	66.67