XLOC_030250 (gene) - C. hemisphaerica

Overview
NameXLOC_030250
Unique NameXLOC_030250
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_13:172714..182684-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_030250 ID=XLOC_030250|Name=XLOC_030250|organism=Clytia hemisphaerica|type=gene|length=9971bp|location=Sequence derived from alignment at scaffold_13:172714..182684- (Clytia hemisphaerica)
CGACAAGGGTAGTCCCCCCCCCCCCAGGCTAGGCGCTCACAAGGTAAGTC TAACTTTCCTTGTTCCTCATCTGTCGGTGAATTTGATTCCTTCTCGTGGA GTATTCTTTCTTTCTTGAATTTGTGCTCGATGGGTTATTTCTGAATGAAA CGATAGATTCACCAGCAACTTCATCCGTATGTGAAAATGATTGACCAAAT GATTTGAAAGTACTTGTTGTATTTTTTTTTTTCTTGAATTTGTGCTCGAT GAGCGGTTCCTGAACGAAACGGTAGATTCATCCGAAACGAACCCAACTTC ATTCTTGTTTGCCAATGATTTGAAGGAACTTGTTTCATACGTTGTTACAC CCCCAAAGACAGGACGACGTTGGTTAGAAGTGTTTTTGAAGACTTGGTCA GCAATAAAGACAGAATGTCCAAAAGCTGACCTTCTTGAATATCTTCTTCC TCCATCTTCGTACAGAATCTAAATTCAAAGAGTAAATTAATTTTTTTTAA TGAAAGGTACTGAAAACGCTAAACTGGATCAGACGATTCCATCCTTTTCA AACAAATTAACAAATCATTTATACTAATGAAATATTATACTTGAAACAAT GTCATCAAATGACTACAGAATTCTCCATGTCTGTATTTTCCAAAAATTTC AATTGCACTTGTACAACAATGGCACGCAGAAAAAAACTTTATACTTGACA CTACCACTAGCAGTGACATTTCTTATAATAACACTGATATTTAAAAGAAA ACTAATGATCGTCTTCCTCCATGCTGCCATCAAAATATGATTAGCTTACT TTTTGTTCGACTAAGTTCAGCCTAAGTATCTTCCTTTGCCACTACGTGCT GGATGTTAAATCCTTTTCTCTCCAACGCCAAAAAAAAATGAACGCATGGT GATGATTATTACTGTTTTCGCCTGTGTAGGCTAGAAAGGTAATTGAAAAT GTGTCAAAGGCTGAGTGTTGTGTAATAAAACTTATGTTACGAATCTACGA ATCTTGAAAAGAAATTAGCTGGGGGTTATTTTCCTTAGCCCCCCCCCTGA AAAATGCTGGGGGCTGGACCCCTCTGCACACTATGGTTATCCACTGCGCC AACTGGCCTTAGGTTACATTTATTGGGAAATGTTTTATTCTATGTATAAA TGGCGAAGGCCCCTTAAATGGATTATTTTCAGAAGAGGAAGTTTATGAAT AATTAGGAAAATATAGTAGAGAGAAATTCTCTTACCTGGATAGGCGATTG TCGAATAATGAATAGTTGACGAGTGTGCAGCAACAGCAGCGAATAACGAT ATCAAAGAAAAATGTATAAAAACGACTGTATAAAAACGATTAGATTAGGT TATTTGTAGAGAAATTAAAACTTTCCACTAGCTTTGGGTGCTATTTTTTA CAGGCTTTTTGATAAGCTTACTTTGTTGTTCGATTTTGAGCTTTTTCTCG TAAACTTCACCCTCGATCACCTTTTTTTCATCGTTCAATGACAGTGAGTT TTGAAAAATCGAGGCTTACCTGTTCGCCATTCTCAAGGATTGGGTATATT TCAATAAGATTTTTGACGGATATATGTGATCCTTAATCAGTTTTGCACGT TGATCGTGTAGGGTAAGCTCCAAACGAGTCGCAATAAGCTCAGTCTTTCT TTTTGCTTTTTGAGTTTCAATATGCTTTGAAACCGAATGTTAATCTTCTC CAGCAGGGATATTTGGGAGATCAATCCCCAAAGTTTTTTTGGATTTCTTC AGCATCACGAAATAATAACAAAAGAGAGATATGTTACAAAAACAGAGGTA CAAAAACACTAAAGACTATGTATTTACAAGAGTAGGAAAGTATATTTACA AAAAACAGAGCAATAAAAAACACTTAACACTTTCATCGTCCGAGGACACA ACAATTACTACTTCGTCATCTACAAAGTTTTCTGGTGAGCATCATCGTCA GATTCGTCGTCTGATATTATAATGGGTGGTACTATTGGCATGTCTTCCAA AAAATTGTCCAAGATCAAATTGTTTATAATCATCTCATCCACCACGTGGT TCACAAAATGTTCGTACATTTCAAAGACATTATTCAAATCGATATCAATG ATGGCAAATGGAAACGTCAAGTCTAGAATGAAATCACCTAATAGTTAATA AATAATAGTCTAAATTAAACTAGTTCACGCTCGATCATCTTCTTTTTATC GGTTAGTTGGCTGACAGTGAGTTTTGAAGAATCGAGACACTCTAACGCTT CCATAAGGTCTCTCTTCTTCAACCAGTTTGTTCTTCTCCGTCAAATCTTC GATGATAAAACTCGATTCTGAAAGCTTCTGACGAAGGATATCGTGCGATA AATCTTCCATTGAGGTGTCATCAGAGCTTGCTTTAGGGAAGGTTCTGGGT GTTTGATCAGTCTCAAGGGCACGATGGATGATCGAGTTTGTATAAAGAAA TTAAAGATTTTAGTTTGAAGGTTTTTGCAAAGTTCATAGTTATGAATTTT TAGCCTTGAATCGTCCGTAAGAATCAAGAAAGAATTCACCAACACAAAAA TATCAAACTTATGAACAATTTGAATAAATCCGTTTTTCAGAAATCTTAGT TGGTTCGTCAACGATCCCAATCAAAAATAGTCATGCTTTCGTGAGTCTAA AAATTAAGGGTGATACTTTTCTCCACTGGTCGAGTGACTGAGGCTCATAT TTCACAAGGAGTGTAAAGTTTTCGGAAAAATCAATATCAATATAAGCTGC GTTAAATAGTTCATTAAACTCTTTGGTCAGGATCCGCTTTACTAACCGTT TATCAATGAAGTCAAGGATTGCTCTCATATAAAGATATTTTTTCACAGTT TTCAGTTTGTGTTTCAGTTCACCTTTTTTTGCTTTAGAAGGTAGACACCA ACTGGTGTTATACTTTAATTGATTGAGTGCCAAAAATTAAAAAAATGTGA GACATAAAATTTCACCTATATTTCCCTTGTGTAAGCCACATTTTTGCCCA CTTAACAAATTGTAAGTCTCAAATAAAAAATGTAAAAAAATTTCTTGGAA GGGTAAGCCACATGACCAGTATGTAATGAATAGCTAATTTCCTCAGCTTA ACCATCAAAGCAATCCTAAGTGTAAGCCACATAATGTTCTCAAGTTATGG TCAATTTAGTGGCGGGCAGTAAAAAAGTCACAAAAAGGGGTTCATTTTTG ATTGGGATCCAACCCAAATGCTATTAAGACTCCAATGACAAATAGACATC GGCGTTTCCCTCTAGTTTTTTAAGAAATTTATGATTGTCATGAAGAGAAG GTGATCTATATTCTCTGCCATTGTTGTAGCGGTACATCTTGGTGCTAAAA ATGAAAATTGAGATTGCAGAGATTGTCGGTACTCTAATAGAAATTAGATC TTGTATAGAGGGATCCTCAAGTTGTGAATTATTTTTCTCGAGCAAGGAAT GAGTAGTAGAAAGAGGTAGATATGAATTCTTGAGTGTTGAAATGTGTTAG GAGTAGAGATTATACTCAATGAAATGCGTGACTTTAAAGATTGGAAAGAT TCAGTGGTAGGCTTAGGTTTGGAGAACGTACGGTCCAGAGATAAAAAGTC TAGTCATGTGGGTTTGTGTTGGAACGTTGGAATAGTGTTATAGTGATAAT AGTATACGAAATGATAGAATTGTTTTAAATTTAGCTGGAATGTTATTGTT ATTATAATTTAGTGTTTCAAGTGTTAAACTTTTAAAAATAGAGAATCATT CCGGGGGGGGTACTAGGGCAAGATGGGTTACGGGGATGCTCCGCTGGTCA GGGTACCTACCTTTTTTAACATTCACGAGTCCCAGGTAGGGTCGCAAAAA CACCAAAATAGAAAAATCAGTCCCTCGTAGGGTGCCTATTTTTGGAAAAT TTGGGGAAAAAGTAGAAAATTTNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTCACTTTTTTCG CAAATTTCAAGTCCCACGTAGGGTCCATTTTTCGAACCTCAGCGGAGCAC CCCCGTCGGTCGACAAGGGTAGTACCCCCCCCGGGGAATCATTTGCGTTC TTTCAGCGTGTTAAAAAAAGGTGAGGGAGTGGTCGTCAGATTTTCTTTGG AGGTAGATTGTGGTGTGTAAATGCTGGATTTGGTATTGGTCTGACTGGGG GTTGCCATAGTATCTATTTCTGGTGTTCGCTGGTCAATGGTGGTTCGGAC TGTCATTTTCTAGGATTGTTGCAATTTGAGATTGTGGGTTCTTGTATAGT GTTTTGGATTTCGTCTTTTGCGTGTTGGTTGTTGAGTGGTGGCTGCAATG CCGGACAAAAGGTTGTAGACAAATGAAATTTCAGTGAAAAATGATGAGAA ATAGAGCATAATGACTCTTCAATGTGTCTGAAAGGGATGGAAGTTAAGAA AAACACTTTTGAAGTCGTTGCATTGCTTTTGAATTGCTTTTGAGGGAACC ACAAGCAAAAAACCAGCGTTTTGATACTGGTGTAAACCAGTTAATCAAGC CCTTGTGGTTTGCCCTTGAGGTTAGACTTTCAAAGACTTTGAACAGCTTT GGATAGGTTTGGAAAGCACCCAGAGCCTCTTGGGAACTTGTCTTTGATCG ATATTGAAGTATTTAGCAAATATTGCAGAAGTCTACAAACCTTTTGTCCA GCATTGTGAGGGTTGCTATATTGAGCCATGTATTGTCGATTTTTGTTTTT TTCTGAGGATTGTGTGGTATGGATCTTCGTTTAAGTGGGTATTGTCATGG CTCCCTTCTCCTTTCTTTTGAAGTAGATTGTGGTTGTGGTAGATTGTGGA TGTATTGGTTCTTTATACGAGGCTGTCTCCTCTTCGTTTTGAATTGGATT TGGATTTGGATTTGGATTGGGGTTTGATTTGGGATGGACAAGTTTGGCCT TCTTTATGCAAATAAAATTTTTAATTGCTTCTACTCCATTTTTAAGATTC AGTACCAGATGTTTGATCTCTTCATTTGATTTCTTAAAAAATAAGTTAGC TCGTTGGTCCCAGCATGAAGTTAAAAACGACGCGGACTTCATGGTCGGAT TTGTTTTCGGTTTTATAGTACTCTCCTTCAGGTTGCTAAATTGATTGAAG TAGCGTAGCGATCGTAAAAATGACTCAGTATGAAATTAAACATGTTACAA AGGTGAGGCTCTGACCTGCCAAACTTACCTGCATGGAAGTGCAAGTCTTC GACACAACAAGCAAAAGAGCTCAACAATACTAGTGTGAATGTAGGCTGGC CTAGGCAAAATCACCTCATCGCCAAGCCCAAGCATGGCAGCAATCCTTAG CATATCCCTCTTTCGGAATCTGCAGTCCACCCAGCATTCTTTATCACTCC ACAAGTCGAAATTGAAGTTTCCCCACCTAGCACCATAGTCCTTATCAACT GCACCTACAAAATTTACCTCTGTAACATCAGCCAGCATGAGGTATTCTTC ATCAGAAATAACTCCATTTACATATGCATCTCTTCCAGCCATGATAACCT AATTAAAACTTTTCACTTACTGCTTTCAAAGTCGAAAGAATAAAGTCTCA AAGAAGAGGGAGGGAGGGTAAACAACTTGCTCTCAATGGGGTCACCCTGC GTGTTGCCTTCGGATCATAGAATTTCGACACCACCGAGGACGAAGAGTCT GGACGGCGTATTATAGCAATTCGAGGCAAGTGTTGCTATTGAGGGGCAGA TGACTTTTACGTTGTGTAAGAATGCTTCACGGTTGAAATCCCGGTAAAAT GTGTAAAATGGGAATAACTCGCGAAAAAAATAGATTGTCAAAAAAATGAA ACTGAAGTTGAGAAATGTTTGAATGATCTTTTTTTGTGACCTTTTGTGAC TCTATCTCAAGAAATTATTTAAGGTCAAAGTATTAGGTTTGTGACACCTT GGCCAGGTGTTCTTCTTTAATTTTAACCCGTTATTCAAAAGTCTCTTAAA GGCGGAGATCTCTTAAAGGCGGAGATCTCTAATTAGCGGATACCTCTAAT TAGCGGATACTAATATGACTCCCTGATGTTGTCCGTTGATTAGAGTCTCC ACTGTAATTTATCTGCTACTTATTTCTTCTTTTTATCAGGCCTGCAAAAA TTTGATCAAGAATTTTGAATGAAAATCATGGCATTCCTAATCTAAGGTCT AGCAAACTTCTTTCTAAATTGAAAAACCAGCTAAAGTGAATGAAACGGAA CCAGTGCATTGTTTTGTTTAGCAAGTTGAAGAGTTTTCGTGGGGATTTAT ATTTTTGGAGTGACACCATAAATAAAGTTAAAATAAAATTATTTACTTAT TTGATGATTTTTAGAAGTTTTCATTCCCTTAATTCCGTGGATGGGAAACG ATGTCCATTCGGGAATTGATGATTTGAAGCGACGATCGTTTGACCATGAT GATGGTTGTTAGTCTTTCTCAATATCTTTTCAACAAATTTTTGTTCGAGC AGAACATTTTCGTTGTTCAATTTTTGCAAATCTGCTTTTTGTCTTTTCAT TAAAATATTGGCTTTGTTGATGTTATGTTCATCATATTGGTCTTTTCGTC GTTTGTTTCTTGGACAGAGGCCAGCATCTATGAGATGAGAATATATTATA TATTTAGGAACAACTAGACGGTACCCGTCGTCGCAAACGCCGGTTAAGTG ATTTAGATATCGTCTAGATCATTCGATATAGCTGACATTATAAGATGTTG ACAAAAATAGATACCTCCACGTTGCTCTTCAACTATGTATGGCTGACATC AAATTTCATTTCCCAATTTCCATTGACGTTTCTGGTTATTTGAATATTTT TCTTATTATTTTTACTGAAAATGAAAAGAGCATATAGCGTATGACATTAA TTAAATCAACACAAATATTTGTTTTCTTCTCGATCCCTAGTCGTCATCCA TTAATAATAGCAGTCACCATTATTCGTCATGAATTTCCGAAATAACAGAA CGTGATGCCGAAAATTTTACCTAGTTCATCATCTAGCTTGCTCTATAATT TTATAACTGGCATAAATTTATGGAACCAGAAAATAACACAACATTGATTT AAAATTTTAATCACTTATTTTCTTTGTTCAATATTTACATAATGATAATG CAGTAATCTAATATAAATATCTTAAAATAACAGAACAGATTAAAAGACCA GATTTAAAGGTTTATTTCCTCAGACAAAACTTTGTCATCACTGGAAATAC TGAATAGAATGAACTAAATTTTATTTGAAATATTCAAGAAATCTTATTCA TCACTGGCTTCAGAGCTTTCTAATCTCAAAACGAATTAAATAAATTAAAG ATCACAATGATAAATACACAAAATAAAAAAATAATGTATACTTTTTAAAA GGGCCTTAAATTCTATAAGGCGATCGAAAAAGTGATTAAAAGACTGAATT GAACAAAGTGCTAAAAAAACTGAAACTTATGCTCACAAATCAAAGCTACT ATCTTACGATTTTCCTCAAGAAATACACAATCATCACTAGGAAAATATAG TAGAGAGAAATGCTCTTACGTGGATAGGCGGTTGTCGAATAATGAACAGT TGACGAGTGTGCAGCAACAGCAGCGAATAACGATATCAAAGAAAAATGTA TAAAAACGACTGTATAAAAACGATTAGATTAGGTTATTTGTAAATGAATC AAATTTTTCCACTAGCTTTGGGTGCTCTTTGCAGGCTTTTTGATAAGCTG ACTTTTTTGTTCGATTTTGAGCTTTTTCTCGTAAACTTCACCCTCGATCA CCTTTTTTTCATCGTTCAGTGACAGTGAGTTTTGATGAATTGAACTATTA CCTGTTCGCCATTCGCAAGGATTGAGTATATTTCAATAAGATATTATTAT TATTATTAACATCTCTTTTATCACCATAAAGCTACGGTATATATATAAAG GTTTTTGAAGAAAAAAAAAAATATACATCGTTTTCGTTTTTCTTAGACAA TATGTGATCCTTAATCAGTTTTGCACGCCGATCGTGCAGGGTAAGCTCCA AACGAGTCGCAATAAACTCAGTCTTTCTTTTTGCTTTTTGAGTTTCAATA TGCTTTGAAAGCGAATGTTAATCTTCTCCAGCATGGAAATTTGGGAGATC AATCCCCAAAGATTTTTTGGATTTCTTCAGCATCAAGAAATAATAGTCAA TAAATAATCTAGCCTAATTTAAATAATCTAGTTCACGCTGGATCATCTTC TTTTCATCTGTCAGATGGCTGACAGTGAGTTTTGAAGAATCGAGACACTC TAAACGCTTCCATAAGGTCTGTTTAAACCAGTTTGTTCTCTTCTCCGTCA AATCTTCGATGATAAAACTCGATACTGAAAGCTTCTGACGAAGGATATCG TGCGATAAATCTTCCATTGAAGTGNACCGAATGCTTTGAAACCGAATGTT AATCTTCTCCAGCAGGGATATTTGGGAGATCAATCCCCAAAGTTTTTTTG GATTTCTTCAGCATCACGAAATAATAACAAAAGAGAGATATGTTACAAAC TATCTTCATTTTTCTCCAAGCCACTAAATCATGATTCAAAATAAATAAAC AACACAAAAATTTGATTCAAATTTTTGTGTTGTTTATTTATTTTGAAAAA GATATGTTACAAAAACAGAGGTACAAAAACACTAAAGACTATGTATTTAC AAGAGTAGGAAAGTATATTTACAAAAAACAGAGCAATAAAAAACACTAAA CACTTTCATCGTCCGAGGACACAACAATTACTACTTTGTCATCTACAAAG TTTTCTGGTGAGCAATATCCATCATCGTCAGATTCGTCTGATGATATTAT AATGGATTCTATTGGCATGTCTTCTAAAAAATTGTCCAAAATTAAATTGT TTATTATCATATCTTCCACCACGTGGTCCACAAAATTTTCGTACATTTGA AATACATGATCCAAATCAATATCAATTATGGCAAATGGAAACGTCAAGTC TAGAATGAAATCACCTAATAGTTAATAAATAATCTAGTCTAAATTAAACT AGTTCACGCTCGATCATCTTCTTTTTATCGGTTAGTTGGCTGACAGTGAG TTTCGAGACACTCTGACGCTTCCATAAGGTCTGTTTCAACCAGTTTGTTC TTCTCCGTCAAATCTTCGATGATAAAACTCGATTCTGAAAGCTTCTGACA AGGGATATCGTGCGATAAATCTTCCATTGAGGTGTCATCAGAGCTTGCTT TAGGGAAGNGAAGGAGAGAGGTCTCGTGTGATAAGTCTTCCATTGAGGTG TCATCAGAGCTTGCTTTAGGGAAGGTTCTGGGTGTTTGATCAGTCTCAAG GGCACGATGGATGATCGAGTTTGTATTAAGAAATTAAAGATTTTAGTTTG AAGTTTTTTGCGAAGTTCATAGTTATCAATTTTTAGCCTTGAATCGTCCG TAAGAATCAAGAAAGAATTCACCAACACAAAAATATCAAACTTATGAACA ATTTGAATAAATCCGTTTTTTGAGAAATCTTAGTTGGTTCGTCAACGATC CCAATCAAAAATAGTCATGCTTTCGTGAGTCTAAAAATTAAGGGTGATAC TTTTCTCCACTGGTCGAGTGACTGAGGTTCATATTTCACAAGGAGTGTAA AGTTTTCGGAAAAATCAATATCAATATAAGCTGCGTTAAATAGTTCATTG AACTCTTTGGTCAGGATCAGCTTTACCAACCGTTTATCAATGAAGTCAAG GATTGCTCTCATATAAAGATATTTTTTCACAGCTTTCAGTTTGTGTTTCA GTTCACCTTTTTTGGTTGTAGAAGGTAGACACCAACTGGTGTTATACTTT AATTGATTGAGTGCCAAAAAT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00047494TCONS_00047494Clytia hemisphaericatranscript
TCONS_00047492TCONS_00047492Clytia hemisphaericatranscript
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_13supercontigscaffold_13:172714..182684 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.09 0.05 0.49 0.4 0.35 0.35 0.12 0.28 0.04 0.08 0.08 0.15 0.08 0.2 0.14 0.18 0.08 0.17 0.11 0.1 0.26 0.13 0.09 0.08 0.29 0.55 0.04 0.11 0.03 0.09