XLOC_030301 (gene) - C. hemisphaerica

Overview
NameXLOC_030301
Unique NameXLOC_030301
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_132:139807..145289+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_030301 ID=XLOC_030301|Name=XLOC_030301|organism=Clytia hemisphaerica|type=gene|length=5483bp|location=Sequence derived from alignment at scaffold_132:139807..145289+ (Clytia hemisphaerica)
CTCAAAATTCCCATTTGAACAAAAGCATAAATTATCCTCAGTGTAGAACC CATTCTTCTTATTGAATTTTGTGCgacatttcaaaatgcattCGATTTGT GATCTAGCGTCAATGCTTTGCGAGTCTTCTGAGGGAAGGACGACGCCATT TTGTTCGAGGATGCTCAGGTAGTGAGCAGCAAAAGCCAACGATTGAAGAT CCAATAGAACGGTTAGTAAGCTGGCCCACTTATACATTTTCTTCCACAGT TGAATCTCGATAATTCGAAATCAAACGGGAAATCTGAtttcttcgaatta cagagagatttgaattatagaaagtatatcaagagggtttctccttgact aGGACAGGGAatgagttcgaattatagaaagattcgaatgatgGAACTTC GAATAAGCGAAACACTactgtattttatttttgaataagaaaATCTTGCC AACCAAAAACACTTTCAAGAGTCACTATCGCgtagtaaaaaataattttg aaatgtcatgaaatttttgaaacatggaATGATAAACAACTCTTCACGAC ACTTTTGGGAGCTCATTGATTTTCATGTCATATCTTTGTGACATTTTAGT GGTCACATGGAAAATATGGATTAATAATTCAGGATGTTTTCCctcaaaaa ttcatatttttaagGAGATGTaattttaagggctctgaccaaagtgaatt tttaatatttgccatgtacaaaatataaatttctacttgatgtagcccac aaactgtggcatgttatacatattctgttaggccaattatccgtgattct gaaaatttaagaatcacaataaaaaattttgatgaagaagaaaaaaaaat ttccgaaaaatctAAAACAGCTCAATTCTTTGGGGACAGtttaaaaaaac ttcgaaacaaaaaggttaattacccattaaaacttagcactttttataaa agaacaacatattagcaacatattattaacgtctttttaaagttcgtaac gtcatttttgcaattaaattcttaattactcttaagggatttgattaaaa agaaatttataaaggcaattctttgttaaaagtgttaaagaacctacacg tttttttttataaggtcagagcccttaactcaAATTCAACCGCAAGATTT GCTATTACATTGTGGTGTTCACACAATGTGATACTTATAAACGGCATATA AATCGTATTGTACTTCTCAATTATTTAATTTTAAACCAAAAATCGCCTTA ACTCGCGCGCGTGTGCTGATTTTTTAGCCAGAAACCAACAGACAAAACAT AAAACAATCAAGAGTGAAACAATCTAACAAGTAAATTTATAGTAAAATGA TCACTTATCATcatagtccttataaaaaactctggtctgaaagcttattg ttttaacttttttttttcaaaagataaaaaatcgatttgctcaagttttt gatAACGTTATTTATCCCAAAAcagtttagaccaactggcatttgtaatt tggcatttgctcatgagggattcgattttaatagcttttccattgtattt tctgtcatggcatttaaggaatcgtcNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNtc atggcatttaaggaatcgtctttttagagtcattactgaaaaggtgattc cctcaagttcaactttgacagatcaaacaatgaaaNaaactttttgccgt agggctaggctatggcaaatcttgcaaattttacaatctatagaaagaac tgaataaaaaacgtgcaaatactttaaataatcaaaaatgtcattttttc tctttcttttggttcctttgtttgatttgaaatgccagaaaaggggattc ctttgctcaaaatggcatttcaaatgccaacgaaatgccaacacgctggc atcattaggcaNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNcatcattaggcatttgacaaaccgaaca attgcgcggaacaatagaattcaaaagaatactgcaagcaattacaaatg ccaggctggtctaaacgcagccacaaACGATACTTATTACCTGGAAGTTG AATTTTGTTGGGAGTTTTATTAATAAATTATTCCAGATGGATGAGTATAA AGTGAGAACAGCATGGTGGTCAGGGTTCATAGCTGTAAATAATCATGCTT GCATAATGAAGGACCCCTCAATGAAGGATGAGGATAAATGGGAGGGTTTC ATCCCGTGGTGGGCACTAATTATTTCTCGAAATtctgattacacgttttt ttttataagaacaaactatataagaacataaggcttcgaggcccaaaaaa ttaagaacattctaagaacattcgaaggctttgGGGACTTAAAAACATGC Attttcttaagaaattacaacaaaatgctcaaaaaatgctgaaaataaga acattttaagaacatttttaggcttcaaatccaaaaaactaagaacatcc gaaggcttcgaaaatttttgacgttcttataaaaaaaaaacgtgtacgtc agtaaaaaataggatttttctttttttcctaatttctgctgacgtcatga aaattttgaaaaaattctttttttaaacgaTCGACttttctttggtgaaa gtttgaagacaatcggataaaccattcttgagaaattcaatgtttagttt ttatgacgtcatcgattatgacgtaataaccagtttttacagtttttcgc gaaaatcagtgaaaaaacaattaggttacacatcaggttagaaacttgGC TAATTTGCGAAAGCTAATATACCGAgaccaattaaaaaaaactggGCGAC TTTATTCTTTCGTTTGACTTTATCTTTACGGTGTGAGATAAGTCAAGTTC TCGCCTGTTTTGCAAAAGATTGTGAAAttcttgaataaaaatttaagaaa aaaccgcaaaattttttctctcgaaataatttgaaaagccgtgaaatatt ttaaaaagctttatccTCGTCAAATGCGAAAATTCTTCCCCTAAAACATa cagagttttttttttcaagcgaaAATTCAGAATACAATAACATAGTTTTC AAACATGCAAACAATATACTCATAAAGTATTGGTCTGTTGTCAAAATACT GATTTAAAACATCTGATTTTCCTTTTTGACAGACTTACTCTGTCATATAC TCTTTTTCTTATCTAAGtaaagaacgaaaaaaaaacatatcaaaCGAATC AAGTTCTCAATGATGCATTGTATGTTTCGTTAATAATTGATTCAAAATTA AATGAACTTCAGTTCAAAAACCATAAAGTTTTGTTGTAACTTAGTAATGA ATTTGGACTATTTTTAGGGGAACTTTGAttgaagaaatttaaaaaatctt tttaggaTATAAATTCTATATGGTGGAATCAgcattttttaagttaaaac attattttttattcCTAAGTGCCTGGAATTTCCCCATCTATCAATTTGAA TCCCtacaaaataatataaattCTGCAAACCACCAAATTAACTACACGAC AAAATCAATATACTTattcttaggtgccaaataaacgggggggggggNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNtgggggggggggggggg ggcgtttatttggcacctaagagtaaggtacacgtttcttttcataagaa catccaaaatttttgaagccttcggatgttctcaactttttaagttttaa acctataaatattcctaacatgttcttattttcaccattctgtgggtatt tttgtgcatttttctaagaaaacagGTATTTTAGAGCcgacaaagtctta aaatgttcttaacttgttcttaacattttgaccatcgaagccttatgggg ggcttttcacttttacggtacgacggtattgggccttttttccCCACTGT AATCGGTATTAccaaaaaaacgacgggattacggtatttcattttctacc ggtatcggtatttAGGTAATTAGACTTCTTTtatcgacggtattacggta tttgacccaaatttttgtcggtatgacagtatttaagacccctgaaaacc ccccttatgttcttatatagtttgttcttataaaaaaacgtgtattagaa TTCTAGCTCCTTACGTTGTTACCAAGTAGGAGTAGGAGGCCTTTAGagtt attgaaatatttattttgtaaTTCAAGTGGactcaatagaccttatcgga gtttttgatttttctaaaaaaacgatgcattgtgggattgtttcgagtgt attacaatagaaatctcttaggaattcctcaagggaattctattgtaata cactcgaaacaatcccacaatgcatcacttttttagaaaaatcgaaAACT TCGATAAGGTCTATTTCGTATTGTATTCTAAACGTTGCGTCAAGCTTACT CTCAAACTATAAATTTGAGCAGCAGATTTGTTTGACTTGAGGGTCAAATC TTACAACCCAAGGTAAAAATGTAtagtaaataaattttttcaagtacgtc aataaaagatttttaggctcaaaagtTGTCAAAAGATAAGCACATCCAGG TTCAGCTAAAATTAAGACATTTTAATAACAAAAAACTGTGTAATTAAAAA TCATCTtgcgaaaacaaaaacattatagCTTAATACTGTAGAAAACACAA AGAAGGTCAAATGAAAATGACATACAAGCGCTATATAGGAAGATTGTCTT GCATTGATGCTTCACAAACAAAGATAAATCTTTGATCACAATTTTGGAGA GCCCACAAGCTTCCACCAGCATCGAATGAAACACATTCCTTTCTACCATT ACCAgatctcgacttttgaagattaTTATAATAAACAACAGGGCTTCCAT CACTCCATTGCCATTCGGTTTCAAAAGATAAAC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00047569TCONS_00047569Clytia hemisphaericatranscript
TCONS_00047570TCONS_00047570Clytia hemisphaericatranscript
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_132supercontigscaffold_132:139807..145289 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.09 0.09 0 0.49 0.36 0.18 0.47 0.12 0.17 0.09 0.1 0 6.52 9.03 2.29 2.07 0.61 1.82 11.67 9.09 6.6 3.34 1.33 1.73 1.2 1.99 0.53 0.27 2.37 0.67