XLOC_030306 (gene) - C. hemisphaerica

Overview
NameXLOC_030306
Unique NameXLOC_030306
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_132:88008..96007-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_030306 ID=XLOC_030306|Name=XLOC_030306|organism=Clytia hemisphaerica|type=gene|length=8000bp|location=Sequence derived from alignment at scaffold_132:88008..96007- (Clytia hemisphaerica)
AAAAAAGATTGATGTAGCCTCGTCGGTTGCACCACTATTCAAAAAAACAA
CACAAGAACTCAAGAAGGAACAAAATGGCGTCCGCAACCAGAGCTGTCCA
AAAACTTCGAAGTGCACTTGCAGGGGTAAGAAAGTAAATGATTTTGATCT
TATGAAAACTTTAGAAGTTTCTCAGCGAGTGGTCTCTTTAAGGTATATCA
AAATTAATTTCGAAAACATCCAGCTACTACAAGGGCCCAGCCCAGGGGTT
TTTCCAAGCACCAAGCCAATGCGGCAAAATGGCAATGCCCAATAATGGCA
ATGCCTCCGTCAGTAGGAGTAGGGTGCGCACTCGTCAGGATTTTTTGCAC
GGAACGAGGGAGAATTTACAAAAATGAACTTAAATGCATTAGTACTTACC
TTTAAAATCATCCAAATCTGTTCATTATTTTTTTTTTCAATCAGGAATAA
TAATTATCAGGGGAAAAAGTAAAAAAAACTGCATCAGGTATCTATTTTCT
TTCCAAAGATATTGATGTTTTTTTGACGTCAAGGTGAAAACATGTCTTAG
CGCTGACCACGGCACCGGAAAATTCTCGACCCACATTGAAACAAATGGCT
GCTATTGAGCTGGTTCATCTTGGGGTCTTCTGAAAAGCTTTTCAATCGCG
GTTTTTTTTAGTAAAAATATTTTACTAATATTTCAACATTTTAAACGGCA
AAAAAATGAGTAATATATCATTGTTTAGCGCCACGCTATTAAACAAAAGA
AAAAAAGAAACATCTTTAGCGGCTCTTTTAAGGAACACAATGATATATAT
TTCTGCTATCCCACAACTCGCAGTCGAAAAATTGAGCAAAATATTGAGAA
TATTTCTGTGGTGAAGTTTCTCAAATTTCCTTATAGAAATCCCATGTTTG
GCACTCCTACACATTGAGTTTTTAACTAAGGCGTAAGNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGGTTCA
GGGGGGCAAAGACCCCAAAAGCTTAGCATATTTTTGTCTTAACAGCACTT
TAAAACGGTTAAAGTTGAATGAATTTACAGAATTTATCAATGAACAAAAT
GAATGAATTCCTAAACTAAAAAATTATGTAAAGAACTGGATAAAAAACTC
CACCAGAATTTTTTCAAAATCATTCGAAAGACACTCAAAAGAGTGTGATT
TTTCAAAAGTCTGAGCAAATTTTGTCTCAACTAGCACTTTGAATCAGCTA
AAATCAGCTCAATTTCATCTTCAATATTAGGAGAAGGGTGATGATATATA
AAACTCAATTAAAAGAATCAACTGCAGCTATAATAACTGAGTTAACTCTA
ACTATGAGTTTCATTCATTTTAATCCTTTTAATGGGTTTAAAAAAGGGGA
AGAGAGACGTGTTTTTACTTTAGTCCATTTCTTCAGACTAGCACTCACTT
ATTATAAGCCTGTGCAGTTTTTATTTTTCTTTAAATTACCTATACATTAA
CTGAGGAAATTCCCTGACTGTCCAACATGGTCCAATCAATGCCATCATCA
TATCCTCCACATGCATGAAGATAAGAATCCCGTACTGTAAAAGTTGGTAT
CTGATAGACCAATTCCATGTGATGTCATTTTCACTCACGATCAGCTATTT
TTTCTAAGAGAATGGCATAAAGAATATGTACAGGATGATTTAGTAACGCC
TTGCTTAGCTCCCCAAGGCTTAATTAGTGTTCCTGTCGTTTGTTTTTATT
GTGTTGGTGAAAATTATGTCAGTTAGGAACAGACAGTTTGTTTGAGATTT
GGTTGACTATCATCAACCTAACTGGATTTCGCTGCGTCTGTCTATTATCA
ACATCTCTCATCTAATTCTGACACCCTTCTAGAGGGTTAAAAGGAAATAT
CTTTTTATCGCACAAATGAAACATATCATAGACTGATTGATAGATTTAAT
AGATCAGGATTCTTTTACTACTAGTTAGGATATCATGTTGAATAATTAAA
AAATTCAGTATCAAAACAACGATAAGAAAAAAATTNTAGGATATCATGTT
GAATAATTAAAAAATTCAGTATCAAAACAACGGTGAGTAAAATGCACAAT
TAAAATAATTATGCATTAATGGCACCGCATTAATGTGTCATGGTTTCGAT
GCTGGAAAATGTTTTAGTTATTTGGGAGAATGTGATGGTCTCCACAACAG
TTACCTAGAGACAAGATAATTTATCACGTTTTTACTGGCTGAGGGAAATT
AATATATGTGGAGTAATTTGTTATTCAATAGACCGTCGCATTCTCCTAAA
CAACTATTGGAATGTGTCCATTTGCTTTAAGTACAGTACTGAGCAAGGGG
GAGCTAAGATGAAAATCCTCAACTTTTATAGGCAAGGATTTTTTCGTATT
TTTGGGCAACTTACACAACCAGTTCCATCATAGAAATCATTTGCTGAAAT
AGGCTTTCAGAGTTAGCTCGGTACAGGATCTTTGACTCCCAATCAGGGTA
TTTTTATTTTGCCCAACTGTTTTAATTTTGTAAATCATAAATGATATTTC
ATCTCACTTATTTTGCCATTTTCCAATCTTATATTATTTCTGTTAAATCT
GAAAAAGCCTCATAGATTACTAAGGGAAAATATGTTCCCGTTTCTGTATA
TTTTCTATTTTCTACATTAACTCTGTTCTTTGATATTTTAGATATATAAC
TCGATCAAAATATTATCACGTATTTCCCTTCTTTTTTTCAGGCTGAATAC
AACATCGCTGTGAGATATTCAGTCAGTCAACAGCCAAGGTAAGAATCTGA
TAACAACGACCCGGTCCATAGTGGGCACCCCCCCCTGGATTCTGGGGGGG
GGGGTGGGGGTTTTCAGATTTTTAAAAATAGGGGGGGGTTGGGTTGATGA
GAAATTTCAGGTGGGGGTAACCCTATGTAGGCGGGGGGGACCTTTTTCAG
GTGGGGGTTCGAAGATTTTACAAATTTAGGTGGGGGTTGCTGAAAAAGGC
GGGGGGTGGGCTGATATGAGATTTCAGGGGGGGGTAACCCTATGTAGGCG
GGGGGGACCTTTTTCAGGTGGGGGTTCGAAGATTTTACAAATTTAGGTGG
GGGTTGCTGAAAAAGGCGGGGGGTGGGCTGATATGAGATTTCAGGGGGGG
GTAACCCTATGTAGGCGGGGGGGACCTTTTTCAGGTGGGGGTTCGAAGAT
TTTACAAATTTAGGTGGGGGTTGCTGAAAAAGGCGGGGGGTGGGCTGATA
TGAGATTTCAGGGGGGGGTAACCCTATGTAGGCGGGGGGGACCTTTTTCA
GGTGGGGGTTCGAAGATTTTACAAATTTAGGTGGGGGTTGCTGAAAAAGG
CGGGGGGTGGGCTGATATGAGATTTCAGGTGGGGGTAACCCTATGTAGGT
GGGGGTGACCTTTTTCAGGTGGGGGTTGGAGGGGTGTTGCCCACTATGGA
CCCTCTGTCACTATCTAGACCTTTCCACACCATTGCAAATAACAATTGCA
GAAAGATTTTCTCATTTACAGTATATTGAAAATAATAATTGATTCTGTCT
TGCTTGAGACTCTTACCTCGCTCTCAAAATGTTGCTATAGTGATTGATTC
CCAGAGTAATTCATAAGACATTTACTGAGTTATAACAGTTANATAATTGA
TTCCAAGAGTAATTAATAAGACATTTACTGAGTTAGAACAGTTGAACTTG
AAGACCCAAGGGATAGCTTCAAAACTGGACAGTTGTTGCACTCAAAATAA
TTTATGAAAAGGTCTATTTTCGCCCTAAAATGACGTTTTTTATCCCATTT
GATGCATTTGATGTGTTTTTTTTATTTCATTCCCACCGGGTCAAAATCAT
TCCCACCGGTTCAATTGATATGAAAATGTGTCCCTCTTGTGGATCCTACT
CCTTAAATGCAGTAGGATTTGTTTGTAAGTAATTAAGCAAAGTGCTATGG
AAGCGCAGTCTGGATTTTCATTAACATAATGTTTTTATAGCGTAGCTCTG
TACACCCCTTTCTCACAACCCCGTTGGAACTTTTTTCCCAGTGGGGATAA
AAATTCTTATGAAATCCCAATGGGATAGGAATTCTATGTCTTCTATTGCT
CTACGGTTTCAATTCATCCAGTGGGGATGGTTTTGGAGTACAATTTTTAA
ACATTGAATTTCGAATGAGGATGAAATCAAAGTCAATTTCCCAGTCGGGC
TGAAATTCCATGGTATTTTCCAACCGGTGACGGAATTTTTGCTAAATTGG
GGCTAGGGTTCCAGTGGGTCTGTGACACAGGGATATCTCCATGCATCTAA
AAAAATTCCCCGTTGATCCATTTTCTTCATTATCAAATATAAACAGAAAA
TTCAACTTATAGATCTAGTTTCTAGTTTGTCTGGCTTTTTTAAAATCACC
TTGCTTTGCATATTGACGCGTCGGCTCTTATGAAAAATGCAAATACTAAA
ATTAATCAAATTGGTTGATCCTCCTGAATGATTTCAATAAAAATTTCAAA
CACAGAAGCGACTTCATTTTATTTTTCATAAAATCTAAAATTTATTAAAG
ACGTTTCTGTGTCATCCGACCACCATCATCAGTTTAAAAACATTGAAATG
AAAATTTCTCTACTAAATACTAAGATTATATCGTCGCATCAAAATAAGAA
AGCCTTAAGTCCATTTTTGTAGTTTTGAGAAAATCAAGTTTAAAGGTTTG
AAATGGCTGCCATTTTTGACCATGTTGGGNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAG
GTCCTAAAGTCCAACTAAAATGACAATGGACTTAAGACTTTCTTAACTTG
AGAAAATTTCAAAAATAAAAATTCTTATTTTTCAAAAAACTTAAAATTAG
GTCACTTTAGGTTGGTTTTTGATGGATTTAAGCCAAAAATTCGATAAAAA
ATGGGGTGTAAAGCATCGGTATGGTCATAATTCAATTTTTGAAAAAATGG
ACTTAAGGCTTTCTTATTTTGATGCGACGATATTATTAAAGACAAGTCAT
ATATTTATTTTCATTTTTTCAGAACACAACCACCAGCCAACCTTCCGTTC
GGTGTAAATCACGAATTGAGTGACAACTATTACGTGCAAAGAGACGGGCG
TAGGGCGCATGCACCACCTACTGTTGTCAAGCCTACAGTGAAACAGATTG
GGGCTGGTGGAGCTGTAGCCGCTGGAGAGTAAGTAAATACTTTTTTTAAA
AAGATTAACTTCCATAAAATACAAGATTTTAGGTTCGAGATTGTACCAGA
GTTTTTTAAGTTGACAAAGTTTCCGCCATTAGGGAAATACACGTTTGATT
TATGTAAGGAGTTGGGGGGGGGGTNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCCTTACCGTCC
GCACATACCCATCATCCATTTTTGCCTAAGTCCCCCCCCCCCCGGGAGTT
GCCTCTACAAATTCGAACGTTTTCTTTCATAATGGTGGATTTATCTTGAG
TTATGCAAGTTTGGAACCTCAAAACCCCTATTTTTTACATAAATGAAAGG
TTAGGAACAGTCAATCTTCTACACGGCAACTGTCGCAAAAATATTAAATG
GCTTTCTACATTTTGGAATAGTAAAGTTTGAGATTGTTTTCAAATAAATT
TCTAATATTAAAGATATGTAATATAATTATCTTTCCTCAATTGTTTCTTT
CTAGATTTAAACCCTTGACTCCAGGAGATGTTTGCGATTGCTCGTGAAGA
ATAACCTTTGTAATTATTTTATCCCTATTTTTTGAGAATTGTAAGAAAGA
TTGATATAATTTGACATAATTTGTTATCGCATTTTTTTTTTCAATCTCGG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00047576TCONS_00047576Clytia hemisphaericatranscript
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_132supercontigscaffold_132:88008..96007 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
131.6	131.86	157.34	191.01	107.96	89.59	102.93	103.61	105.03	94.61	91.69	102	62.68	86.36	82.25	82.72	173.67	166.67	56.5	56.74	161.15	165.17	92.41	86.11	122.03	116.48	81.69	59.56	66.27	62.37