XLOC_030340 (gene) - C. hemisphaerica

Overview
NameXLOC_030340
Unique NameXLOC_030340
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_133:275633..280631+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_030340 ID=XLOC_030340|Name=XLOC_030340|organism=Clytia hemisphaerica|type=gene|length=4999bp|location=Sequence derived from alignment at scaffold_133:275633..280631+ (Clytia hemisphaerica)
GTAAAACTAAACTATCTAGTAACCCCCGTCTTTACACGAAGTAAGAAAAT AGAATTTGCAAAATGGTAGCAGAGTGGCGCGAAACTATTTTTTTCTGGTT GGTATCGAAGTACAAACTTTGCAATagttaaagctatttcaaagtAAATC TTAACCTAACATCATGATCCTTGCCACAAATCACTGATTAACTGTATGAA ACGCTTTTGCAGTTATTCTGGAAGAAACTGGGGAGGATATTTTTGTGGTT CTTTGAGCAAAAATGGACTAATCTTTTAACAACTCAACTCATCATGACAT TTTGGTGGATCACAACTGAATAAAATGAAACACTGTCAAGAAGAACACTG AAAACATCAAACTTCAAAACTGAAAAGCATGAGCAGGtatgtttttttaa cttttcagttCTATACCAGACTCTCCCACTCTATACAATCGATAACTTTT TCCCAACCATTGATGACCAATCAAtaactgattgattgattggatATCAA CTGATGGTGATGGGGAATCAAGCCTTTTCTATAAATAATttgctacacgc tttttttttataaaaatacactttataagaatgtccatgatgaaaatgac caaaaaattaaaaatatgctaagaatatcaccatcatggaattttgagac gtatgtactaaatgttaaatctagtctgaattaggatcctaacctaagaa tgNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNGTATATCTTTTTTTACCAATGTTTTGTTCAATGGA TAGGCAACCAAACCTCacttctcaaaaattaaaaaagattatCAAGTAAA GTTAATAAtcagggaaattttttttcgatttttcagatGACACCCGCACA AAAATAAGTCTGAATGGAAATCTGAAAAGGCGGCCGTCCACATAGAACGT ACGCACTAAGAGGGAGggggatcttctcaaaagctTGTGCTTTTGACAGG GGGAGGGGTCAAATGGAAATGTTACATACTCGGGTAACCTAATGCATGtc ccaatttcttcaaaaactaCTTATATTTATACatttctttttgtatttat ggCGTCATAATTAGGTTTTCTTAACCCCATTCAACCTATGCTTTTAgagg cggttcagaactaggggaaAACTACATACTTACTAGATagagggggtata gccatttgtgtacgcttgcgtacagggggagggggtacttgaTTTTCAAC ATCTTAGTGTGTACGTACTACGGGGACGGCCCCAANNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNATATTCCAAAAATCCTGTGTCAGACTTTCTGAAACACTGAGTT GAGCtatgaattgaaaatgttttcaaaaatatttttcagagggtctgaat cctaaaaaattgatttttgagattttaagtcAGGAAACCAGTTTTTAAAA AACCTAATTAATTCATTGCATGCCAAACAACaatttccctgaaaatttca agtcaaagtCTTTATCTGATCCTGAGATATTCCTGACAAGGTACATGCAA ACCTGAGAAAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNTGCAAACCTGAGAAAAATGTGGCTGCGTGTTAA AAGGCTGAACGGTGCGATACAACGCAAACGAAATACAAACTAAAAGGTCC TCTTCAGCCACagtacaaaaataaacaaaaacgtgTTGCGCTTAAGTCAG taaacaaagcaaatttttttgtgaccttGCGAAAACATAAAATTTGAGTA AAAACTGCCACAAAACTGTGACAAATTGTTCATTGATAGTCCGGAATGAC TCTGTAGCCATAAAAACCTTTCTGGTGCATATTTTCATTCATATatagac ttgaattgacaatgagcTGACTTGACCTAAGGTGGTTATGAGCAGGGGGG GTACaaaggcagggtactaacccatagccgggtggtggtgtctatttttg catttcaaaaaagttagtacccggtactactttacgggtgggggtgtgta tttttcactctttTAGCAAGTACAGGgtactatttgggtactttttcaca gagttttgctcctttttcaataaaaaaagtagtcttttgtaatattttga cttttttcaaatattattttcttgatttgaaattttttttaattgagaaa cttttttttactcttttgagaatttttttgatttttgtgaagacAAAACT TCCGAAATGGTCAAGAAATGTGTTAttaaaatcaaaggacaaaagccTCT GACTTAATCAATGATAGTTTGTTTGAATTATCTGTCCAtttcagtcagaa aaactaACACCCTCTCTTttggtctaatctgtaaaatataagattttagg gggtggtgtctctattttttacagcaaaaatgaagtagtacccggtacta aatatgggtgggtggNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNAACCAAAATCAATAATCAATGGATGATT GATGACAAATCGATAACAATTAATGAAAAATCAATTACCATCGATACACT GGAAGTTAATTGATAATGATCGATTCTTAATCGTCAGAACCAATTCCAAA AGGTAGTCGATAGTAATTGATACCTCATCAATAACAATTGATTTTGCATC AGTATCCTGTATTATTGATTCTGATATTTATGATCAATTAAATCATTCAT GACTTCCTCAAATTGTTTATCTGAGACTTATTCATTACTGGTTCATCTGA AACCCTTCACAAAGGGGTGAAATACTTTAAAAGATATATTaaataactaa aaataattGTTAACGTTAAATCACACATAGAATATAATTAAAATGCTGAT ACTGCTGTCTGGCTGTATTCGGAGACTTAAGGTATTTTATGTGTTTTTGG ATAACTTTGGGAAGGCTTGgtacttttttaaatcaaatgatCCAAAAGAT TCATATGTCTAAAAAACGAGGGGGTTTGGATACAAGATTNATCATTAAAT GAATCGATACGGCTACACATTTTAGCCACATTAAAAACTAAAGTTCCTTC CCAATAAAGTTAGCCGGTATCTTTTGACGTAGTGGTCACGATTGTCTTTT TGACATCAATAATAAGGTTTTAAATGAGTCAAGCAGAAAGTAACACTTTT GCATTGCACTTAACACTTCTTTGGAGATGAAACCTTTTTGTTCTAGTTAG GGGATGAAAAGAGTATGTCATACTTTTCATAAAGTAGTGATCTTTAGGTT TGTACATGTAATGAATACCTTTACTTTCAATCGAagttgttgaaaagata tgagGCACTGTTTGCAAAATATACTATTTAAGATGTACACACAGTAATAT ATCTTCATCTGatatatctttttatttcagCTATAAAGAATTGACCTGGA CATGAATTCAAAGCTCCAAGaattcaaaatgcagaaattggtatggtttt tattgaatatttgaaTTTGAGAGTTTAATTGAATTGACTGCACTAATTT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00047637TCONS_00047637Clytia hemisphaericatranscript
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_133supercontigscaffold_133:275633..280631 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.37 0.46 1.21 0 3.55 1.84 1.29 1.21 0.5 0.72 0.6 0.7 0.3 0.94 0.71 0.29 0.25 0.42 0 1.18 0.65 1.52 0.67 1.09 0.77 0.93 0.21 0.25 0.38 1.22