XLOC_030344 (gene) - C. hemisphaerica

Overview
NameXLOC_030344
Unique NameXLOC_030344
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_133:347997..355445+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_030344 ID=XLOC_030344|Name=XLOC_030344|organism=Clytia hemisphaerica|type=gene|length=7449bp|location=Sequence derived from alignment at scaffold_133:347997..355445+ (Clytia hemisphaerica)
gtCCTTACGAAGAGAAGGAGCTCTATgtgctcgaaacgaaggaagatata
tgacgtagcctacgcCCCACACGTACGGTGGGTACACGATAGACTAGATA
CACGGCAGAGATAATAAGGGCGTTATGGGCGGATGTAAAACAAAAAGGAA
GGCGGGTCTTGTTGTCCGATGTACCagcattgaaaatttaaaaattttgt
agaTGCACCGATATCCGGTACAGACAAGGAAACGAAACGAAAGGAGACGT
TCACCATTCACGTTGGCCAGAAAAAACTGTCAAATCCATACCAGTTTTTC
AAAGATCTTAAGTCAAAATGAGTTTTGTTAAGCCAAAAGGGGTGAGTAAA
GATTCATTTTTGCATATATTGGGCCATTcaagaatttgtctgtaacaggg
gggacggacgacacaggatttctgaGGGCAAataaaagttttcaccaaaa
ttcaaattttgaaattcagcTTATTGAAAGATAATGGAAGTATCGAAAGT
GCCaagtatttttctaaatttgaaaatttgaagcaaaatctttgatacTT
TCTTAAAGTTTAAATTTAGTAGTTTAAATTCTTCGCCACTGCATCAGGGT
TTTCAGTAAATTTTAGGAAGGTAGGAGACTGAAGGTCAGAGGTCGGCTAC
TATTTTAGTGATGCAGCTATGTGAGAGTCAACTgagggcccaccatggtt
ggtcCCGAAgtgcaagaaaattttgaaaaatcaggcAGTTTTAAGTACTG
AAAAAGCGTTTTTTAGCAATAAAACTATAGAAAAATCTAAGCACACTTAG
TACTTATAAAATGAATATGCTAGCAGACGTTAGGCATGtttaaaagtaaa
caaagagaGTGAATGAGAAAATATTACACTACTGTAAAAGATAGCAATAT
ACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNTGAAGAAACACTCAAGAGAATGATATA
AATGAAGTCTTTCATTAACAAGAAGATATGatcacaaaaaataaattttc
agaaacaaAATCATACATCAAGGATATCTTGAAAAGACTTTATGGCCGGC
GACTTTGAGCTAATATTGGGCTTTGAGGTCGGCGAAAATCGCCGGTCGCC
GGCCTCAAATAAAGCCCCTGCTGCATGACGTCAGAACTGCAAACTGGGGT
ACAAAACAGAACACTTTTAAAGATTAATTACGTGTGTTCAGTAAACATCA
GGGATCGAATTAACGATTTAAAAGTGCATCGCACTTTTGTGCGAACGAAG
CGAGCAAATTCTGCTCAAAATATTTTAGGTTTCACGATGCGTTTTTATCA
ATATACGATGCATTCTCCACTGTAAAGaccaatgggccattccagttttt
attcgttaccccccacaatggacgacatggaatttccgtagagcaaattg
ctttcaagaaagtccgtaatttccgtaacaaatttcagtatagacctaac
ttttcatacaaaaattacgggaaacgcgtgtttggactttgtaccctatg
ctgcactcaagcactaggaccaaaatcccgcaaaggcaggacaaaaatca
gttttttgaagtttgcaaaaaaacgccacatagaagatctttcaaattca
gtatgtgaatagagcagtaaaaNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
Ngtttgtaagtgcactttatagttttgattcccattgaagaatcatattc
tggttttcatgttattagatggtgttttagagctttaggtctacactgaa
tTTACAAAATACTTATCAAAACCTtggaattccgttactgtaacctaaaa
aaatcatagaattccaatactttaatgaaaaattaagtaaaattcatgga
attccgatactttctctttaaagtttgcctggaattccgtgccaaattta
tttaaaaaattgatgtcatccattaaggggtaatgtttttttctggaatg
gcccaatttaCAAGCCAAATAACCATCGTATTTGCTTGGAGGCTCAAAAT
GCTGTTAAATTCTTGATATGTTGTATCgcgattttgttgaatttctgaat
ttttgcttcgtacatttcCAAAAACGCATCACGAATCGCGAAACACGATA
CGTTAGTTCGATCGAACCCTGAAACATACTCtcttagtgagttaaaccat
agtgtttattttaccctcaaaattattaaatcttatttGTTGAAAAAAAT
GTCAAGGCTCTGCTTTTGACTAAAacattaccgtcaactgctccaacttg
ggacgagtgtacgcaacatgggacttgttgatatctggcctgtattttca
cttactgttaaatctctttgacaacaaatttgttttgataactccaccaa
gtttatctatcaatcatactttctgtcataacatgtcacgataactttca
ctaaTAGCtcaccctttttaacttttgttttcatttaaaatgactgGACG
CCGAATGGAGGATTAGAGAACGCCcaccgcctaaccgcctacccCCGATG
AGATTAACAAATAGTGAGTGTGTAGCTTGCCAcacgagtgacgtcaaacg
ctcacaTTCGCGTATGttttccactacagatttttttcatatttcgattt
aaaagcctactcggtgcgaaagagaaatcgtgtattttttaatacgcagT
TCAttgaactcaaatcaaatgactttggaggttcggtgaaatggtggtgg
aatggccgtccaatgttgcgtaagatagtcccaagttggagcagttgacg
gtatctattaaattattttaagcAAATTGTGATAAGGATGCAACTTTTAT
AGGACAGTTTAGTTGAGGATAATCAATCATACCGTTAACTCTGCTTGTAG
TTACAAGAACAAAGCGGGAACTCCCCCTAACATCCAGATACTTAATTAAA
TTCAAACNAAGGGGATTACTACAAGAACAAAGCGGGAACTCCCCCTAACA
TCCAGATACTTAATTAAATTCAAacatttgattttctaattttgatacaA
TGAAAAAAAGCATAAAAACTAAAGTTTGAAATCATCAATAATTGCTTTGG
CACTTTTGATACAAGGACTTGTCGTCAAATTTGACAGAATTGCAAATTTA
GGTgatctttcaattttcaaattttgaaattcatgaaatttcttattttt
ttaatttcaaaatttagaaaaatacttGGCACTTTCGATACTTCCATTAA
AAGATAGATACTGAGAGATAGATAGATaccaaattgaaaaattttgtgct
AGTAAAAActcccttaattaaaaccagtcGCTGTTTCCTTGTGTAGATTA
GAGTAATTAGTTCTGCAATAATAGACTGCAACATTCGCTTAAAGAGTATT
TTCCCTTGTCATCCAAAACATTTCCAGTCATGTTGGAGCCAAAACAGCAA
AACATTCTTTAGACCTGAACATTAATGTTTGAGGTAAAATTCCTCCAAAA
ACCTGACCCTAATACACCCTTGAACATGTGCCGCCGGGCCAAGTTTGGGT
CATACTCATGTTTGAGACTTTTTCAACTTCAAAATTATCAATTGGCCGGA
AAATCCCAAGCCATACCATGTAATAGAAGACAACCAATACACTGTGTCAT
AGATGACAACTCACAGCAGGGCCCAACTGAACAATCCTCGAACATGTTCT
ggtcaaaatagcaaaaaattatatttgccTGATCATTGATCATTGACGTT
CAGGCCAAGTTCGGgcaacaaaattttgaatttcaccCCCAAAAACCTTG
CCCAAACATGCCCCAAGCATGTGTGGGCCAGTTCTGGTTATGTTCAGGGC
TTTTTTAAGCTCAAAATCTCTAAGTGGCCTGATAAAACTTCACCAGGCCA
AACCCTAGGTATATACAGTAATTATAGACAGTGAGACAGTTTTTAACACA
AGCACCgcattgaaagcaaaattttaaatatctCATAAAAACAGCTTGTG
TGGATacaactcaaaattttaaaagcctCACCTTTTCGTATGGGAAAGAT
TGAAGGTGCTAAACAAACACTTTCTAGATGTTTTCCTCTCAAAAATAGTG
AGATTTCGGCTAATTATTGTGAGATTAGATTATTTTATGATGATATCATT
CTGTATTATATATATGCCAGATAGGCAATTGAGATTTTTATCATACAACT
TACTGTAAGTAAGCTGTCTGACAGTCAAAAGCATTTTGACTTTGCTTGAT
TTCACCATCACCTTTGATCATTTTATTACGAGATAAAAATAGATTCAAAA
CAAGttatataatttctttttttcctgatttttaaaaattgatcttcatt
tttgatcaaataaACGAACCAACAGAAATTCTGCTGTGAAGAGGCTAAGG
GCCCTTGAACAACAATTTGCCCTTATCAGGAAATTTATATTGTCCAATTT
TGAAGTTCCAATAACAAGACAAGATGTGAGAAACATGTGTCATTAAGATT
TTGGGAGGGGATGAGGGAATATTgactaaagatttttgaaaattccaaaa
aattcaTGACATGGAATGTTTCTCTTTATTTGTTGCAGCTTGAAACATTT
CAGTGGGCTAACtgaaaaaattgcaatgaaatatttttgaggGGGATTAT
CTCATCTCAGTTTCTATATATTTTCAATACACTTTAAACTATACATGATG
TGGGAGAAATTATATATTTGACAAAATTATGAAGCTCAAATTGATAAATC
TGGAAAATCTCTTAATAAAAGCCaaggaaaatcagaaaatacttaaacct
tgaaaaatcattttgataTCTCTGTATTGCTTTGAGTTTGAACAGAGCGG
TACTTAAATCTCGGACATTATATGAGTACCAAAAAAGGgttttcaagaaa
ctttttgcaTGTCACCAAACTCGTATCCAGTCCCTTAgcttgctttttga
tgattctgatagcgctcacaaAAGGCACTGGTAAACACCTATGAAAAAAC
aggagattttttgttttttaatttatggtgttcaatatttttttcacatG
TCCAAAGCTATTTTCACGTCATATATTGACATAATAGTTGTTTAGGAGAA
TAATTGACCGTCGTGTTCTCCTAAAGGTCTATTAGTAACAAGTGTCAAAT
CAAATTGGGAAGAGTTACTTTATGTTTGCGTGATGTTTTGTCAATTGTCA
ATCAAATGCGAATGTCCTAATTAGATTATAGAAGATTTTAGTACTGAGAT
TCGAATGATACTTTAGTtccaataaattttaaaaattaaaaaaaatgtat
gaCCAGCTTTTATCTCTATCTATGTTAGGGTCTATCATCAACACCAAAAG
AAGGCTTGACCATCGAATACAAAGGAGGTGTCACAAATGCTGACGGCAGC
AAAGGAAACTTGCTCAATCAACAAAACCTCGTCAAATCCTTTCAAAAAGT
ATACCAGGTAGGAAAATGGAGTTTTTTTGTGTTATTTGCTAAAAACCTTT
AGAGTCTTATCTAATTTAATGCTACCCTAGTGGGTTACTTAAATTTATGA
ATTATTTGGGTGGTACTTTGAGGATAATCTCCCCAGGTTACTAATATAAG
GGGTATGCGGAATCTTAAAACGCTGGTTAGGCAGATCTAAAAGTCGACTC
agtcagatacacatcttgaaaatgagttaatttgggaccctgtcagatat
tcTCAGAGCccaaaaaagggaccctgaccagcggcacgtccctgtACCCG
ATTTTGCCTACTTAAGTACCTTCTCCCCCATTCCATCCGCACGTAGCAGG
ATGGATTGaatatttgttcaaaaaaaCTGATAGACTGGGATGTTCATAGT
GTGGCGAGGGGTCTGACCCCCCATTAatatttgatccccccctatATATG
CATCCCccctatttcaaaaaattttcgaacccGCACTAAGTTGTGAACCA
CTTTAATTGTACAATACTACATATTTTTACCAAAAGGTTGTTATCCCcct
atttttatttaatacCCCCTAAAAACTCAAATCCCCCATTTTACTCGGAA
AATCTCTtatccccccctataaagcctttCTTGAAAAGGGACCCCACTAT
GGTGTTGAGTAAGAATGTTCTGTTTTAAAATGGAATGAATTTTCACAAGG
AGACATTTCTACTgtgatatctttatttttcatacaGTCTGGTGCAGAAT
TCGTCCATGTCAAGACTTCACGTGATCGAATGGTGGTCAATGGCGTGATG
GTCGGTTCGTTAGTGAGTATTGCAATTAGTATGGCTGGTCTCTATAAGAT
GTCCCAACcgaagaaaaactaaaataatttatttgtttacacacaacaac
aacaatgaaaaaaaaaacacaaaaaaatagtaaaatgaCTATACAAAACA
AAATGCAGCATATGAAACGTGAAATTGTacagaatttgttttttttttat
tttgactttccTGTTTAATAAAAAGTTTCAACAAAATTGAAtttatgttt
atattttttctctaccagtggataccccttaaaatctacaacaaaaaaag
gtaccctctatatcctgatagagaaaacagtaagggctgaaactttttc
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00047649TCONS_00047649Clytia hemisphaericatranscript
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_133supercontigscaffold_133:347997..355445 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
225.94	218.43	250.45	285.2	101.66	79.15	143.95	147.97	331.88	224.88	282.58	391.49	218.6	216.09	220.94	226.63	280.62	316.06	158.08	191.93	238.43	226.88	182.72	165.35	194.19	172.65	225.09	203.35	159.56	134.25