XLOC_031078 (gene) - C. hemisphaerica

Overview
NameXLOC_031078
Unique NameXLOC_031078
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_148:207125..214623-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_031078 ID=XLOC_031078|Name=XLOC_031078|organism=Clytia hemisphaerica|type=gene|length=7499bp|location=Sequence derived from alignment at scaffold_148:207125..214623- (Clytia hemisphaerica)
AGTAGCACTGGAAAGTCGTGACAAGAAAGAACCCTCATTTTTTGTTTTAG GGCGTTTTTGCAGCCAACGTTGCGTAGGAGCGTATGCAAGCAAGCGGCGA ACACAATTGATTCAACAGCAACTGGAAAGCGGTGAACGTCCACCCACCAA ACAAACCAATAAAAAGAGTGGTGTCAAGAAAAAGAAGACGGAATCGAAGG TATTTTGTCGCATTTCTCCCTATGGGAAGTCAATGCCAATGGATCTACGA TACAGGAGATTATGCAACTGATTCAAACTTTTGTACCTCACTTACCTGTA TTTATATCGACCCTGCTGGTTTTATTTTTCTTGCGTCGACAGCGATATCT GCATATCTTACAGGTGCCAAGGTTGGAGGTTGCTTTCATTTTAACACTTA GATTTGATTTTATTCAGGATGGCACTCCATCGTCACCTTCCCTCAACAAA AACAAAAAACAAATCAAACAAGAGATAAAAGATGACTCCATATTATACTT TCAGACTGGTGAGTATGTTTTCCCTTATTCTTTTTTTTTGTCGATCGTTT TATTGAAAACTTGACCACTATAGTTAAAAGCGAAAGTTTTCCATGATTTC CCTCAAAATTCCTCAAATATTTTGGTGAGACTGCTATTGTATTTTCTATA AATTTTGAAGGACTTCAGAGAAAGTCGAGCTTCAAGATGACTCAAGAGGA TTGGATAGTATAATTTATGATAAAATGACACAGAAAGGATTTATTTGTTT TATCTTTAGTTGGTCATCATACAGGATTCTGTTGGGAAACTTATTTGCAA ATCACTGCAACAAAATCTGTTCCCGTTGAAGCCTTTTTCAAAGTAAGTGC ATACAGTCAGAATTGTGATTACCATGCTTTTGTATATTCAATATCAAGCC TCCCTAATTTAAATGATACTGATAAGTGTTTAATTTAAACTTCTGTTTGC CATCAAGGAGTAAACCTCACAAAATACTCTGTATAATAATTCAATAGATC GAATTCGCTCCGAAATTGCCAAACTTGACTTTTCTTTCCGCTTTCTGTAG GAATATGATGAACAAGAAATTCTACCACAAAGCACGACCAATCAATTTGA ACAAGGGATGAAATTAGAGTGCATTGACCCCAAACACCAATCGATCATAT GTTGTTGTACAGTGGTGGAGGTGCAGGGCGCACGGCTGCGCTTGAACTTC GATGGTTGGCCAGCCAATTACGATTTCTGGATCAACTCTAACTCTTTCTT TTTGCATCCTTGCGGATGGTGCAGTAAAAATCAACAAAAATTACAGCCTC CTAAAGGTAATGGTGAGCGGTATTAATATTGAAAATTTCTGGTGACATCT TTTTTTGTGAACTTCGAATGAGAAAGGCTTTTCTTGCTCGCTGGCTCCAA AAAATCTGATGTATCTCAGAAGTAAACTCTCAAAATTTCTTTTAGACATC GATCCCAAAGATTTTGAATGGAGCACCTACCTCATGAAAACACAGAGTAA AGCCGCCCCCGCGAACCTTTTTTTCGACACACCACCTGTATCTCGACATG CATTTCGCATCTCCATGAAACTAGAAGCTATCGATCGAAAGAACCCTGAC TTAGTGTGTGTCGCATCCGTAGCGAATACTATAGGAGATCAGATTCTGAT CCATTTTGATGAATGGGACGATTTATACGATTACTGGTGTCGTGAAGATA ACCCTTACATTCACCCCATGGGATGGTGTCAGAAAAATCAAATCGCCCTC GTCCCACCTACAGGTAAGACTCGTGGAGTAGTATCCATGGCAACTTTCAA ACTCTTACATCTTGTATCTTCTACGCAACGTTGAAACTTTCTGAGATATC AAACTAAACAGTTGTAGAGTGACCAGTTGTCCTATATAGGCCTGCTGAAC ATCAGTCAATGATGAGCTTTGCTGTTAAAAACTGAATGCTACTAAAGAGA TTGTTTTAAGTCTGTCAAAGTGCACCAGAATAAACATAATAGGGATCATC CTTCGCAAACCAAAAAGGAATTTACCGAATTTTCCCCATTATCAGCAGTT CATTGCATTACTGTTTCTTGTAGATGAAATGGTTGGCAAATTTGTATGGA AAGATTATCTGAATGACAGTGACTGTATCGCTGCCCCTGATGAGGTGTTT AAAGAGGTAACATTATACTCACAAAATCTAATTCCGATGCTTTGAACAAG TAACTTTTGTACTATTATTATTGTGACTTTGTGTTCACTTTTCATAAACT CNTAACTTTTGTACTAGTATTATTGTGACTTTGTGTTCACTTTTCATAAA CTCTCTTTTCTATCTTTCAACGTGTAGCCAAAAAAGCTATTATTCGTTAT TGGAGATAAAATGGAAGTCATCGATCCACGCAACCCTACACTTTGTCGCG TAGCAACTGTCAACCGGGCAGAGGATTTCAAAGTGCAAATTCATTTTGAT GGCTGGCCAAGCATGTATGATTGGTGGTTCGATTTTGATTCCATGGACTT GCATCCAGTGGGATGGTGTCAGAAGACTGGTCATGTGTTGGAACCACCTC CTTGTAAGTTCTTCCTTTTATCTATTTTCCGATCGGTTTGCTTTTTATTT TTGCCAAAAATATTATTTTCAAAAATTAGTCGAGTATGGCAGGCTTTTGG CATGGTATGGTTTAAACTTGATAGCAATATGAAAAGAGTTCTAGCCTCAA ATTTCATTCAATTTCACTTTTCCATCGGAAGAGAAAATTACTTTCAAAAT GGTTTACAAGACGAGATCAAAAGAATCAAGGATTTTTAAAGATTTCTAGN AGCCTCAAATTTCATTCAATTTCACTTTTCCATCGGAAGAGAAAATTACT TTCAAAATGGTTTACAAGACGAGATCAAAAGAATCAAGTACTTTTAAAGA TTTCTAGGGAATTATGAAACTTTTGAAATGTTACCACTCTTTTCTATGTT TTGTTGTGTATCTCAGCGGGGCAAGATGCGACATCGCCATGTGGTATCCA AGGATGTCGCGGTGTCGGGCACATCAAAGGCGCCAAATACACAACACATC ACACTTCTTTTGGCTGCCCATACACCTCACAAAACATCCACCGCACCACT TCTCCTGTCGTGGATCGCCTGGTGATGGATTCTGAAGAAGTATTCGCTGG CTCAACACCTTCCAATAAATCGAATGAAAATAGCCCTACTTCCACAGGTG AGTCATCCCTTTCAGGTTTACTGATTTAAAGTGGGTTGTGATATGGTTAT TTATTTCTTTACCCGTAATGTCAATATCATGTCCGAGTCTCAATGTCTCT TGATCTTGAACACTATGATTATTCCCCAACTAGAATCTCCAAATATTTGA ATCAAAGGAAAAATGATAGTCGTCGTGAGGAGAATCTTTAAAAAACATTT TCTTTTCTCTTTTTCAGTTTTCCCTGATTCAACAACAAATTACAAGTAAG TAAATCTCCTGCACCTCACCACTAGAAAGAAGTGATGATCCATCTCAGAT CTCGCATTATTTCCAACAAGAATCGAAAATGAAAAAAGCATGATCAGATG TTTCTATTAAGTTATTACTTCTATCAGTGAAGGTAGCGATGCGCAGTAGT TTAAAGGCCATGTTTCCCACTCGGCGCTATGATGGTGCTGGTAAATGAGT GTTAACTCACCTGGGCCAACCCATGTCATTTGAGGGGAATTTGGTACAAT ACTCTGATACACGAGTGTGGGTGGGGAAGTATGCCAGACATTGGGGTTGT TATAATGACCAACATAGACAAAAACTTGTAAGATACATCATGGCTCTTAT GTCACGAGCACAGGATCAACAATATCCGCTAAGGGAAATGATTTCTCTAC CCAACTGTTCCGTAACTGGTCCTTGCCGTTCGCGTTGGCGAAGTTATTAT TATAATGTTTAAGGCTTTTGAAATTTCCCTTATCTATTTCTTTTCCAGAA ACATGGTAAAATCTAAAAAGGCTAAAGACAAATCGAACAAGTAAGGATGT GACTTCATCACCGATGATTTTTCATTTAGTTGCAATTTCTGTACATTTTT GTCCAGTCAACTCTCTCTATCTTATGTTTTCAAAGATGAAATATCCCCAG ATTAACTAATTGTTGTCGATTTTCAACGTGGAGCATAAATGTTCACCGTA AATGAAAGCATTTCATTGGACAAGAGTTTCATTTTTTTAGGGGAATGAAT CGCAAACGGAAAAGAAGGGGAAGTGATGAAGTTTCATCTTGTAAGTATTC CCTTTCGTGGGCTGTTGAAAACATCAATGTGATTGCATTTATTTAGAATT TTTCAAAGTGAATTTTGATTTCAAAACCTCTATCTTGAGAACAACCAGGA AGGCAAGATTGTTGGCTGACATTCCTCAGGGCTAGGTGCTTCGGGCTTTC AAAAGTGTACTTTAGGATTGTTGAAATAAAACGCTCTAAAGTGGAAAGAT TTTTTGTGTGGACTTTATTTTGCTAAATTTTCGCTTCGAGAATACAGTTG TTTCAAGATTTGTTTATGCTCCTTTTTTGGCTATACCCGATACTTTTAAC AGACTGCTGTCTCTTTGACCGGGAAATATTTTTCCAGGAATCAATTCTCA AGAGCTACCACGTGAAAAGGATAAACTGAAATAACACAGCCCGTCAACAC TGACGCAGTAACACTTTTATTCAGTCACATTCTCAATGTGGGAAGGGGAT CTGATCGCTGTACAAGATTGCTGAAATTCTAATCTTTTTAAACTGATGAA AACTANTCTATCAGTGAAGGTAGCGATGCGCAGTAGTTTAAAGGCCAGGT TTCCCACTCGGCGCTATGATGGTGCTGGTAAATGAATGTTAACTCACCTG GGCCAACCCATGTCATTTGAGGGGAATTTGGTACAATACTCTGATACACG AGTGTGGGTGGGGAAGTATGCCAGACATTGGGGTTGTTATAATGACCAAC ATAGACAAAAACTTGTAAGATACATCATGGCTCTTATGTCACGAGCACAG GATCAACAATATCCGCTAAGGGAAATGATTTCTCTACCCAACTGTTCCGT AACTGGTCCTTGCCGTTCGCGTTGGCGAAGTTATTATTATAATGTTTAAG GCTTTTGAAATTTCCCTTATCTATTTCTTTTCCAGAAACATGGTAAAATC TAAAAAGGCTAAAGACAAATCGAACAAGTAAGGATGTGACTTCATCACCG ATGATTTTTCATTTAGTTGCAATTTCTGTACATTTTTGTCCAGTCAACTC TCTCTATCTTATGTTTTCAAAGATGAAATATCCCCAGATTAACTAATTGT TGTCGATTTTCAACGTGGAGCATAAATGTTCACGGTAAATGAAAGCATTT CATTGGACAAGAGTTTCATTATTTTAGGGGGATGAATCGCAAACGGAAAA GAAGGGGAAGTGATGAAGTTTCATCTTGTAAGTATTCCCTTTCGTGGGCT GTTGAAAACATCAATGTGATTGCATTTATTTAGAATTTTTCAAAGTGAAT TTTGATTTCAAAACCTCTATCTTGAGAACAACCAGGAAGGCAAGATTGTT GGCTGACATTCCTCAGGGCTAGGTGCTTCGGGCTTTCAAAAGTGTACTTT AGGATTGTTGAAATAAAACGCTCTAAAGTGGAAAGATTTTTTGTGTGGAC TTTATTTTGCTAAATTTTCGCTTCGAGAATACAGTTGTTTCAAGATTTGT TTATGCTCCTTTTTTGGCTATACCCGATACTTTTAACAGACTGCTGTCTC TTTGACCGGGAAATATTTTTCCAGGAATCAATTCTCAAGAGCTACCACGT GAAAAGGATAAACTGAAATAACACAGCCCGTCAACACTGACGCAGTAACA CTTTTATTCAGTCACATTCTCAATGTGGGAAGGGGATCTGATCGCTGTAC AAGATTGCTGAAATTCTAATCTTTTTAAACTGATGAAAACTACAATGGAA TTTTATTTATTCTTTTTAGCCACCAATTTTCTGCACGAAGAACGAATAAC AAAACATGAATACTCTCCTATGGACATCCCCAAAAAGATACGATCTACAC ATATCCCTGCTGGTCTTTATGGCAGAAATACCTACTTTGAAAGGAAAAGC CAAGCGATTCCGTGGAATACACAAGAAGTTGGTGAATTTTTATCTCGTAT CGGTTATGCAGAATACGTACCCATCTTTAAAGATAATGTAAGTTTTTCCT GTTTCCCGTTTCCTTGGCGCATGTTTTATAGCTCCCATAGGTCTCTTACA TTGCCTCTGTCCGAAAATGACATGTGGTATGTTTTGGCTATAGTGAGTTC CATTGGAAGAAGATAGGGACTATGGTTGGCAAGTTTACGTCATCTCCTAC GATTCTACAAAACCGCCCGTGCTATAATAAGTTGCACGAATCCTTTAGAG GAAGCCAGCGGCCTACGCACATGTAAGATTCGTTGACCCCGAGCCGTTTT ACACGACTCAGCATATTGAGCTTGCTACCTCTCTTTTTTTAGCAAATTGA TGGTCAAGCATTGCTCTTGTTAAGTCAAGCTGATCTTGTCCATCACCTCA ATCTCAAACTTGGTCCAGCTCTCAAAATCTATAGTGAAATATCNCGGGAA GGGGATCTGATCGCTGTACAAGATTGCTGAAATTCTAATCTTTTTAAACT GATGAAAACTAATGGCATTTTGTTTATTCTTTTTAGCCACCAATTTTCTG CACGAAGAACAAATAACAAAACATGAATACTCTCCTATGGACATCCCCAA AAAGATACGATCTACACATATCCCTGCTGGTCTTTATGGCAGAAATACCT ACTTTGAAAGGAAAAGCCAAGCGATTCCGTGGAATACACAAGAAGTTGGT GAATTTTTATCTCGTATCGGTTATGCAGAATACGTACCCATCTTTAAAGA TAATGTAAGTTTTTCCTGTTTCCCGTTTCCTTGGCGCATGTTTTATAGCT CCCATAGGTCTCTTACATTGCCTCTGTCCGAAAATGACATGTGGTATGTT TTGGCTATAGTGAGTTCCATTGGAAGAAGATAGGGACTATGGTTGGCAAG TTTACGTCATCTCCTACGATTCTACAAAACCGCCCGTGCTATAATAAGTT GCACGAATCCTTTAGAGGAAGCCAGCGGCCTACGCACATGTAAGATTCGT TGACCCCGAGCCGTTTTACACGACTCAGCATATTGAGCTTGCTACCTCTC TTTTTTTAGCAAATTGATGGTCAAGCATTGCTCTTGTTAAGTCAAGCTGA TCTTGTCCATCACCTCAATCTCAAACTTGGTCCAGCTCTCAAAATCTATA GTGAAATATCCAAATTATAATATTATTCGTCAGCTTGACAGAGTTAAAAT TTACTAATTATTTTTTGTACATATGTTTTATTTATATCAACAAATTAAAT ATGGATACTTTATTGAAACTATCAAATGGGACTTCAATGTATTTTGGACG GTTTCAAACATTCGTAATTAAAACCTGGGCTTTATTTTCATAGTTAGTA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00048928TCONS_00048928Clytia hemisphaericatranscript
TCONS_00048927TCONS_00048927Clytia hemisphaericatranscript
TCONS_00048926TCONS_00048926Clytia hemisphaericatranscript
TCONS_00048925TCONS_00048925Clytia hemisphaericatranscript
TCONS_00048924TCONS_00048924Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00048927-proteinTCONS_00048927-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_148supercontigscaffold_148:207125..214623 -
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
L3MBTL4PREDICTED: lethal(3)malignant brain tumor-like protein 4 isoform X2 Homo Sapiens
L3MBTL3PREDICTED: lethal(3)malignant brain tumor-like protein 3 isoform X2 Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
20.76 20.13 4.32 2.68 4.86 4.26 18.54 20.73 10.51 15.14 12.88 7.57 7.67 9.06 4.8 7.02 12.26 11.75 4.56 6.34 7.42 6.69 20.41 17.78 10.77 10.25 2.84 3.11 11.75 14.78