XLOC_031082 (gene) - C. hemisphaerica

Overview
NameXLOC_031082
Unique NameXLOC_031082
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_148:316035..319751-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_031082 ID=XLOC_031082|Name=XLOC_031082|organism=Clytia hemisphaerica|type=gene|length=3717bp|location=Sequence derived from alignment at scaffold_148:316035..319751- (Clytia hemisphaerica)
TTAAAGGAAGAACTTCTGAAGAAAATCAACAGGGGAGAAATTCTAATCGG
TGAATTGATTGAACCAAAATGTTACATCAGGATAAAGTTTAAAAAGGGGA
AAATTATTAAGGAAAAGGTTGAAATTCGTGGACGCAAACTTCCACTGGAG
GAAATTCGAAGGAGAATGTTTGAGGAACACAAATCTATGGGTAAATAGTT
AACCCCTCTCTTTAGTCAGGTCAACATACATATTCTTGTTAAGCGCACTT
ACAATGTGTAGAGGCTGCTGATTCATTTTTTGTCACGAAATAGCCTTAAG
CTTTATGATTGACTTTAAGCATTTTCGGTTGAGATTGAAGGTAAAAAATA
ATTATTTTCCACAGCTATATATACGGAATTTACAACTTCGTTATTGTTCA
GGCATCTTGAGACCAATGGCTGAATATGATCGTTTTCTTCTAACGTGGGG
TGACCACACTTCGATGTTGAGTTCCGGTTATTTCCTGTATACCGTCAAGG
TCATATATTCAGATGATATTTTTTACACTGACAAGGAGATGCGTGAACTG
TTTGGAAAGTCCATTAATGTGCAAAGTAAAGTGGAACAACTCGAAATTTT
CATCGTTGGCCAATGCAAAGAAAAGTTGACTTATGTTAAGTCACGTTTGG
ATGGTATGGAGGAAATGGCTGAGCCTTTCAAAGTCGGAGATGCTTTAGTG
AAAGACGTTATGAGGTTTTTTATTGGTAAAGAAATTTAATAGGTCTTATA
ATAGTATCAAAAAAAGCTGCGGCTGGAATGATAACATCTGAATTTATGTT
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNCATCTAGAATTTATTTTAAACATTAGAGGTTTTATCAAA
CGTTATTGTCATTCAATATTTCGACTTTGTCTAATGGTTGTAAATTATTA
TATTTAAGGTGACCATCCCGAACTCCAATTTGAATCTGGAAACTCGCAAG
GTGGCAATTATCCGTGTGTGTGTGGCTGTCATTCGGGCAAGTTCGGAAAC
ACCGCGTATGCTTTCAAAAACAACTTTGTAAAATCCCTTGATGAAAGAAG
AACAAAAGTAAGTTTTTTCCGTCATGCTGTGTAGTATCTTTGTGCCCTCC
CCCCCCCACTGTAGAAGAAATAATAACAAACAATTAACAGTCAGTAAATC
AAAGTCCATTTGTTTGTTTAACAATAACATTCTCTATTTTGTAGCTCATA
GAAGGTCCTGCTGGTAGGCAAAAAAATGCTATCAATCCATATGGGAAGTT
GAAAGTGAAAGAATTGGAAAAAGAAATTTTCGCGCGGGATCTTGTCAAAA
AAGTCAAAGGTATGAAAGATAAGTTTAATTTTTGAAGCCTAGAAATTTTG
ACACTTGGTTCTTGGATTCATAGTCTTTTTTGCTACCCCTTGACAATAAA
TCGTCCATACCCTCTCCTTCGTAAATTTTTTCTGAGAGCCCATTTTAACA
CGGAAGACTTCAATATTATCTTTTTTTTTATACTATAGGTAAATGGTTGA
AAGATGAGCTAGATGATGTGCTGAAAATGGATTTGGCTGGTTTGTGCCGT
ATCCCTGCTGTTTGCTTCCTCAATCCATCGCTTTCCCTAGAACGTATCAA
TCTCAAACACTATGAAATTTCTCTAATCGAGCCTTTGCACGATATTAAGG
GACACATAAAGAACATGTGGGAACTTCTACCAAAGCATCTCAGTAAAGAT
ATGGAAATCTTTTTTCAAAATGAGCTTATATCCATTCTAGGTAAAAATAA
TTTTTTATTTACTTTTCAACTTCCTCTTCGTGCTTCAATATCACAAATTT
TCGAATGATTTGCTTTTTTTGTAAAATGATTTTGTTATTGATTTTGGAAT
TGCTAAGTTCCGTTTTTCTGAGTTTAAATAATGTCTAATTTAAAAAGACT
TTTTGCACTTCCATCTAGGTGAAAAAGACACATATCGAGGCAGTGACTAC
AGACTGTCCGCTCTCTTCATGTGCTGGGTTATGGAGAACCATTCAAGCTG
TCCTCGTGAAATCAAGGTAAACGTAAAGTGAGGTTGATACTGATATTTTT
TATTTTCAAACTTTCAACTGTTGATAACTGTAGATGAGAGTCGACTTTTT
TACATTTTGGACGCTGTTACTTACAATTTCATTATTTTGTCTCTAGGAGC
TGCTCTATACACTCACAGAAATTAGTCGCCTTGCGTATCTCCCAGCCCAG
AAGCGTTCACCAAGATTTATTCTACGCGCATACAATATCACCTACAAGCA
TACACTTCTCTGTAAACAGATATTCGGAAGCAGGCCATCGCTAAACAAAT
TTTATGGAACGTACTATCATTCGCTAAGCGTCCATCTTCCTGAAGTATTT
CGTATCATTGCTCCCTCGTCCCTCTTCTCCGAGAGTGAAGAACGCTTGTT
TAGCCAAATACGAGGTATCTTAAAAGCCACGTCTGATCGTAAGAAAGAAT
CAATCCGGGATGTTGGTTTGATAAGGCATGATTTCATTTTATTCATTTGC
AAATTCCAATTTTTGTTTATCAATAATTCAAGGATTTTGATTAGTGTTGG
ATATTCTGCGAAACGTTCACGCTATGTTTTTGTGACATTTGATTACCTTT
AAATTAATGCGGTTAATCTCCCTTCTTCCAACAGATATCAATCTGAAAAG
ATTTTTCAGAAGATTTATGGTTGTCGCGATACCACGGACTCAAGAGTTCA
AGTATATCAACAGTTGATAGGTATGTTCTTTATTATTGCTCCTCTTTGTC
GCATTTAACAGACACACGTGTAGACTCACGGCTGGGGCTGCTTGGCATTT
TATCTCAATTTCTGACTTTCTATGACCCGGCCCCTAATATTATACCATGA
AACAGCACGTTGCATCACTTTTTCCTAAAAACTTAAAAAAATAGATGGCA
AATTCTGGATTTTTCTATTCGGGTGTTCCGATAGAAAAAGTGTCATAATA
TTGAGTTAGCGATCAAGAACATAACTTAAAAAGATACTTGTAATTTATTG
ATTTTAGACAAACACGAAAACTCAACATTCCATCTTGGTGAAACGGACGA
CTCGTGGTCAGAGCATCTGAATAGAATTGTCGACTACATTCTGCCTCAGA
ATGATCCTTGGTGGGTCAAGAAATGTAATATGATCGAATTTTTTGATGGC
GATGACCAGCCAGAGGAGAGATCAGAAGGGCCTCGAATGTTTGACTTCAA
ATCAACAAGTGTTGCAGAGGTTCGTCTTTAATGTACTTTAATGTACTGTC
GTTCTTTAGAATGACCCCCCCCCAAGACAATTCATAGTCAGACCCGCATA
TATTCATTTTATATTTTCATTTTTAGGTACAACACCAATTGAAAGAGACG
CTCAAAAGAAATTGGCAATATATTAGTAAAGACCTGGCAAGCGAACCTTT
AATTGACGATGAAGGTCAGAATCTTTTTTTAATTTATCTGTTTTCTGAAC
AATCATCTGACTTCAAA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00048934TCONS_00048934Clytia hemisphaericatranscript
TCONS_00048933TCONS_00048933Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00048933-proteinTCONS_00048933-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_148supercontigscaffold_148:316035..319751 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.07	0.35	0.07	0.12	2.47	1.77	0.42	0.74	0.67	0.9	0.91	0.52	0.84	0.66	0.76	0.94	0.79	0.92	0.74	0.63	0.45	0.48	0.51	0.68	1.52	1.13	0.46	0.16	0.19	0.12