XLOC_031119 (gene) - C. hemisphaerica

Overview
NameXLOC_031119
Unique NameXLOC_031119
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_15:344512..351498+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_031119 ID=XLOC_031119|Name=XLOC_031119|organism=Clytia hemisphaerica|type=gene|length=6987bp|location=Sequence derived from alignment at scaffold_15:344512..351498+ (Clytia hemisphaerica)
tcagaattcacattttaataaaaagaaataataaataCACGACTTTGGTA ATTATCTGATTATAATTATTGATGGAGAGTTTCATTGGCAAGCAGCTACA GCTTGACTATGAAGAAGATGATGGATTCATTACTTACAAAGGCACAGTCA AAAATGTAGATACAAGACAAAAGAAACTTATCATCAAAAATGGTAAAAGT TACTAGTATAATAGGCTTCTTGTTAAAGTTTGCAGTataactttgtattt ttaaaacACTAATTTCAACAGTctcagaaaaatgaaattcagcTAGTTAA AAGTTTCTCTTTCAGTTAGGAACTAACAAAAGTTACAATTAATTAGGTTA GGAATAATAAAACTGTGTGAGAAAATCCTCGCAAAAACTTATTCAATAAT GTTTCTTTCCATCATTGATTTTCAGTTAAGTTTGCAATCTGTTGACCAAT ATGcttaaagaaaataaactttagACAGAGATGCAGACTGTAATAAACTT TCAAGCCagactttttcaatttcaatcaaatctAATAACTATCATAATTT TTTCAGTGTTTGACATCACCAATGATAAAAAGCTTCGAAACGAAAAACAT TGCTTTGGTGAAAAGATAAAAGATTGTAAGTATAGTAATAAATTATCAAA AGCTTCCATCCATGTTCACAAATTCACCGTTCATGTCTTGAACTTTGTTT GAACCCTTTTCTGTTGATTAATAGATTAACATTTGAATACGATTTTATTA TAAAATTGACTTCTAATACCAAAGGATATAGAGAAACCTTATTGTAAGTT CTAAATTTGCTATGGTTATCTAAGTATTTTTTTTGATGGTTTTACTTTTA TAGTAAAAATATTACAAGATGCTCCGCTAGATAAAGAATCAAGGtatatc aaaatttgataaatttttatttcattgacCATTTTGATGATATGTACATT ATGATTAGATGATATTGAGATAAGCAGTGATTAATATGGATAAAATGTGG AAAGTGTTTTTTTAAGTCTGGGTGCCTTTTAAAACCTTACGTCCTTGCTT GTATCAGGCTGactattattttctttttagacCTATTACCAGTGACGTCA AATATGAAAAGAAGAACCAGAATTCAACGCTTTATATGGACACAGCAGAT GAAGGGACGTCACTCTTTCAAATGGATCATCTTCAACCCTCAAACTGTAA GATCGGTTATATAGTTTTTGGAATTATGAATCTAATAAAGCTACTTTTTG ATCCCACACATATTCTCCCCTCTTAATGTTATCTCAAGCTTCAATGCCCC TAATATGATTGCTAATAATTctcgaaaacaaaattttatctgATTTTACC ACTCTTGATATTGATATGTTAACCATTTTAATTTGTTTCTGAAATATTCA GATATCAATGGGATTGACTCAAACTTTTCTGATTTGTCATTGAATGAACC TCCAAAAGTCATTCTGATTGATAAGATTGACTCTTCATTTTACCAAGCAG TAAGTAATGTATTGAGCTTAATCGATTTATTATAAAGGATTGTGTTTTGA GCCCTTTTTTAATCAGTGAAAATCTCCAACTAAGAGTGTGTAAGGAGCTG GGATTCTGGCCAGGATCCCAGGCATGGGTACTGGATCCAAGGAATCTTAT TGGGTCtgctttttcttgaaattgttttgtttgcagattttcatgttttg aatgaaaatttaactgtttgatatttttgtttttatttaattagcATACA ATGATATGCAACCAGAAGAACATATCTATGTTGGTGGACGGACCAAAAAT TAATCGATTTGGTGACATCTCCTTACTAACCATCGGAACAAGACACATGG TCTATCTGTTTGACATTGAATCCCTGGGAAATGATGCCTTCCAAAAAGGA TTATTATCAGTCATTGAAAATCCGAATATTTTAAAGGTAGGCTGGGTTAT GTAAGGCTATATCTTAATTTGCTATTAAAGTGAAGGGTTTGAAAAGTTTG CATCACCGTTCCTTATACAATTTTAGTGCAATATATTATAAACCCTCTTA ACCCGtcgagcatcttcctatttttttactaggagacccccccccccccc tttgaaATCTCAAGATAGACAAGTgctatgaccttgaaattttgtgaaag acCAGTGATAGATATGTCAACGGTTTCTGTTACTAATCTCTAACTGACAA ATCAGCCTTCAAGAAAATTGTTTAGTCAAATCGAAcgagtcaatcagtca atacatgattttgGTCAATCTTACATTCTGGTCTGTTAAATACCAACCAG ATAAGTGGccgaaccaaaattttgtcaattatCTTCAACTATACATATCC TATCACTGgtctttcacaaaatttcaaggCCTATAGCACTTGTCTATCTT GAGATTTCAAGGGgggatcaaaaagtatgcagaCCGCTCCCTTTTTACCT AAAAAGCTCAATTTGAGTATAACCACTCGTCCGATTTGCTCGAAATTTCG ACTGCAAGCTTTTATGATCAATACCTAACACTTgtcaaaattttaagtca aaagcATTTTCCGATCATTACATATAGAATTCTAGGGCTGTTTAGGCAAA AAGGGCAATTTTgggccggtctgtaaaatacacgataccAACAGGTAGTG AAAAAATTACCATCTGCACCAATAAGTACATGTCACATGATGTGGCCTAa caaatttgagcaaaaaaaattaaagtgaaaaaaaattaaaaggggGTCCT ATTTTCTTAAAGCATCACCAATGATgctgaaattttcaacaaagatgCCA ATTCATATTTGGGGCACActtacaaaatttcaagtcaattggataaaata attcaaaagtgataaaaaaaattcgtttTGGGGTGGGGGCCTCATGCCCT CCCccaagatgctcgaagggtcAACACTTGATTGGAAAGAAAGTAGAAAC TGTAATACAATAACTCGCCTGTATATATTCTCTTTTCCCCAAGATTTGTC ACGATGTTCGAATGGTAAGCGATTGTCTTCAAGGCAGATACCATATTCAT CCAGTGAACATATTTGACACACAGGTAAGAAtttatgaaacatttttaat ctTCAAAGTCAATAGGAAGAACATGATTTAGAAAAGCCCTGGAAAACATG CTACGGAAAACCAAGAACATCCTACAGAAAACCAGACAGAAACTCAGGGA TTTTCCTTTCAAATTGTCTTTAACTTGATTTCGATATCCTAAGTTCTCTG TATAACAGAAAGGCTTGTATGGATCTGTTTTACTTGATTTATAAAAGTTT CTTCCTTTGGGGCCAACCATGTGACTCCTCAGATCCATTTAAAGTCATTT GTATTGTAATCTCTATAATGTTTTGTAAACATGGTGTTGAAAAGTTTCAA CAATTTCGAAATCAGTTATGGATTTCATTcagggaaaatattttgtttta aaactcgGGGAAACTCGGGGAGAAGCTGCATTTCTTAATTTCTGCCTGAA CCATAAAGAAGTACGAATTGTTATTTGTAGGGCTCGTAAAACgtaaattt tctttctatcGTTCTTGTATTTTTAGGTTGCTGATGCTTTTgtacataaa aatgaaaatggtaCTTTCCCTGAGTATGTCATTATTGATAAGTCTAAATT CTACGAAATAAATTTATTCTCTGCAATTTTCTTTCTACAATAGAATGAAA GACTGTTTTTCATGCAAACGTGAAATCAAATACACGCCTTACCATCgtta cgtcatttttcaaacGTGTCAAAATAATTAAGCTGACAAGGGTGTGATTG GTCAGGATTGGCTCTTCGGAAAGGCTCGACTATCAACTATCATTAATGTC TTTTTATTGAGGtatttggctcaaattttactTCGGGTTTCTCCTACCTT TCAGGAAAGTATCATCATTATCAGAGTGTGTCAAAAAACATTTGCCAATT GAAGATTTAGGATTTGACAACAAATCATTAAACTTAAGGGACAGACCAAT AAGCATGGAAACCCAGAGACACATTGCTTTGGTAAGTATAatgagctttt ccagaaaagaattttacccccactgttgaggatattattcttcgaagtat cgaaccccctggatatcctactttattattacccctggatatcgtatttt ttacttgaaaagacactttacctcctggatatccgctcccttgtagatat ttaaccccctgcctggatatccacttttgaacaaaaatcgtttaaccccc tggatatccgatattctcaacagggggcacggactatttttTTAAAGGCC AATGTTGGTTTACCGACTTTGACAGAattttttgatacttgataAGTATA AATTAAACCCACGACCTATTGCACTGTAATCGGATGCCCTATCATTGCAC TATGTGGTGCTACACGACTGCGATCTTACATTAGCCAGCCTTCATACGTT GAACCTCTTAAATCTCGAATGTTTCTGTAACTCGCAAGTTTTTATGGTCC ACGGAGATTTTTGATTTAACTAATTGActaaatttgtccaaaaaagccAT CCCTGTCTTCTTCTCCAAGTCTCTGTCACTTtgcttaaaaataaaaccaa aattcaTACTATTTATCTTTCAGAGAGCAATGTATCTTCGTGAATTGAGA ACAATCATGATGGAGAAATTACTAGCAGATTACTTGTATGGCGTTGACAT TTACTTGAAAACAATTCGACAAGAACCTGACCATGGCTTGAAGTTTGTAA GATTAAATTCTCTTTCTAATTAACAGCCCGGCATTCTGCTCTCACAGGGT TTTAGTGAGTTCATTTGACAAGTCTTGGCTTTTGATCACTGAAGATGAAG CTAGCAGATTAGATGAATCTTTTGAGATATTTATTccattttaaggtttt tgtcTTGCTTTAGTAACCCGTTATGGCCATCTAAGTAGCCGAAGTAGAGT TTTATATACATTCACTGCTGTCAAAAACTTTACTCTTTTTAGGTAAATAC AAATAAGTTGCCTCGTgaaatgataaaacagttttcgAATAAAACAACAG ACAATCACCACCgagggaaatttcaaacttccaGAAGGAAAAACAACAAC AGGAACATTGAAGATGAATTAGAAGACGAGACATTTAATGACTTTGTAGT ACAACAATCGAATCGAAGCGCTTGGGACGCGGGTGAAACTTTCTCACAAC AATACCAAGAAAAACATGGTGAAATCGTAGAAAGCATGGGTGATAAGTTT ACACTCTTGAACCATGATAAACCAATATTACGTCAATCTAACAGTCCAAA CCTTTCAGATTCCCAGAGATCTGATAAAGAATCAACTCCACTCGACATCA AAGGAAAGCCTCATTCGAAATCATCTAACAAAGGATCAGACTCGGATACA AGTGTCGGCTCAAAGCGTCAAAAATCACATGTTCGCCAGTTTAAGACACG CGAACAGAATTTTGACGATTACCAGTTCTCAACGACTTCAGATTCAGATT GCGATCCATTTTTGGTGACGTCTGGTGATCGTGAGGAATATGATATGGCA CAGATCGAAGAACTCATGAAAATGGAAATGAACAAAGTCAATAATAAGCC TCATACTagcaagaaacaaaaaaatcaaacatttaatTCGAACAAAGAAC AACCTTCCAAAGGAGCTCCACATATATCAAATGCTGGTAAACGAATGATC ATGAGGGGTCTTGGTGCCGAGAAAACTACCAATAATAAATCATTAAAACC TCCGAATCAGCAATTAACAAGAGATTCTTACTATTCTTCTTCGCCGGCAT CTTCAGTTGATCCAAACGAGTATCCATCTCTACAAGAAGCTGCCAAAACA TCATCCAAGACTTCACCAGGCGATagacaatcaaaatcaaaattcaacaa tGATCAGTCTGGTCATCATTCTCCTTATACCAATGGAGTAGTTTCTCCTA GTTTCAATGGATCTGGTAATTCACAAAATGACTCTTTTTCTAGTCCAATT AAGCCTAGAGGGCGTGGTCAAATTCTGAGATCTTTGACAGAGAATCAAAC GAACAAGAATCGACCACCACCTGGATTTGTTGAAATTGGTGCTCCACGAC AGATCCGAGAAATGAAGACTTCCTATGACTTTCCTTCCGATGACGAACTT TTAGATACTCCTCATGTTTTGAAAGCTGTTGAAGGAACTGTCATTACTGG AGAGAATGTAAGcgtcttgaaaaagaaatatacaAGTCATTGATCTGATG TTGGTGGCGACTTTGAAATGTATGATTCTACTTGTTGATTGATGTCGGAG TCTTTTCAAGATTCGCAAGTACATCTGGAAAGGTTTATCTGGAAGGTCCT tgctttcttttgttgaaaattatGGAAATACTGGGACGGTTAAAAGAAAT CATTGACAATGTTTCTTGATCTTCATGAGCAGTATTTGTTTGGAAACACT TGCTCAGCTTCCAAGAAGTTCCCtcttttataaacaaaacaaaatgttgc ataaacttttgaaatttgttgcTGTTTGGTGTGTTGTGTTTACTGCAATT CCGCCATAAAAACAAAGGTCAAAAAAGGTTGATTGATATTTTGGGCTAAA AAGTgtttgaaaaatggcaaaagtgGTTTGGATTTACCATTAATTTCTTC GTAAGCTTATTTCTAGATAGCTTTTGTTTTCTGATCCTGTGTCATGCTTC TATTTTCTCTTTCTATCTACATTTAGTTCCCAGTCTTTTGGCTTTAGAAG GACACAGTAGCTGGTTTCACATGACAtagttatttttctttgaaaaacgg AACTCACCCTTTCTTCTTTTCTATTCTTAAaaaccaaatttaatttttca tattttagttcatgattttaaaattgtttgttttcattttaaccTAAAAA AGTTGTGTTTGTTAAGTATATGTTGCACTAATCTTTGTAAGAGGTTTTAT GATGCAGTATTTTTATGGTCGATATTTTAAACATGTC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00048993TCONS_00048993Clytia hemisphaericatranscript
TCONS_00048994TCONS_00048994Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00048994-proteinTCONS_00048994-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_15supercontigscaffold_15:344512..351498 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.12 1.13 0.73 0.82 15.25 11.62 10.91 11.92 6.08 9.53 8.32 5.7 6.45 4.97 3.66 6.34 4.67 5.03 4.75 5.93 3.18 3.87 2.22 3.54 7.36 10.99 7.22 5.77 3.16 2.19