XLOC_031263 (gene) - C. hemisphaerica

Overview
NameXLOC_031263
Unique NameXLOC_031263
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_154:748826..757467+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_031263 ID=XLOC_031263|Name=XLOC_031263|organism=Clytia hemisphaerica|type=gene|length=8642bp|location=Sequence derived from alignment at scaffold_154:748826..757467+ (Clytia hemisphaerica)
aaaaaatgaacttcatcGGGAGGGTTTAAAGTACCTCTGTAGCTGTACCA AAGTGAAGTTTCTAGCGCAAAAGggtaaaattcatttttcattcattgta ctttatttttaatttttaacaaatCAGAACATGaagtgaaattgaaaatg actaTTACCTGTTACTGCCGATAAAACGTTTTCAAAGACAATGCATGAAA AAGCAATGGTTAATATCATGTTCAACTTCATTCTGCTTTTGATTGGTGTT TGTTGCTCCGTGTATTTTctctttgattttcttctttattccACTGCTTC TTACTGCTACTGATCGATCTCTCAATTTGAATGATCAACTAGAAATTCAA CCGTCTATTCATACCAAAGTTTTAGGGGCGCAAAATCTTCCATTTTCCTT ATAGAAACTCtcatttttatcataaatttcaCACGGAAATGACGGGAAAT TTatgcaatttttttaattacacCAATTAAGTGGTCACTATAATGTCTTC AATTACCGTTTTGATAGTTTCGATGCTTTTCGATATGAAACAGATTTATG ATTCTCTGTGCAGCTTGGCTAACGTTGTAAGACAGAAGGACAACCCAGAA AATATCTGTTCCATGATCAAAGTGAAGAAACAACCACGAGGATACACTAA TACACCGTAAAATCAATAACATGTGCGCCAAATTCAAATCGCACTTTATT AGACTATTTCATTTGATTAGTACATGATTATTTTCTACGTCACCCCAGTC ATTATCTTTTTATGGTTGAGCACTCTTGCGAATTAAGATATTTTTGTCTG CGACCACAGTCGGAGGCGAGCCGAAAACTCCACTTACGATAGCTATCTGC CCGAAGTTAGAGGAGGACGCCACTCTTTCTTCctagattgctccacttac cgtTGATCATTCTCTTTATTGTTAAGAGTCAAGTACCATTTCTGTAAAAA AGTTTTGGGTATGACCCGCCCATGGATTGAAACAACGACCGAAGCAACTA CCTTTGTACCATACCTactttgataaaatcttttagACAGTTTGATACAT AAGTTTTACCAAAGAcaacaaaaaattcttgaattcTTACGTATGGCGAC CAAAATATCGTATCTTTCTTGTGAAGGGAGTTTTGCCACagatttgtgat tttttccCCTTGTGTAAATTGCGAAAATGGCATACAGCAGTACACGAGTT TATTAAATAAGCTGAAAATATAGCAAATTCGCTAATATCCCTAATACTCA CTTTGAAGCAAGGTAGATGATTTCTCTCGGGAAGAAAAATGTTTGGAGCC TATTTAGTCCTTCCATAAACTTAATGTGAATAAGTGAATGAAATGTCGAG AAAATTCGACTGACGTGGGGTTCCTGTCACCTCTTGTATACAAAGATTGA TTTCATGATAAAAGGGAGTTAAAATTTATTCAACTTTTCTCctgtattgg gctcttccagaaaaaatccgttcatggggggtgaaGGATGAattgtacag gggtattgaaaaaataccaaaaaattgcaatgcccaggggtaattttttg tgtccacagggttgatttgatgtttgtccaggggtataacccgtgtccag ggggttaaaaatcacaATGttcaggggtaattcatgaaaaaaataatata tcctccacccccccNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNCCAATGATTTGCAACGAAGgatacc atgatgaagtttcgctgtaggggtgttacctaattgtttacgcccttatt ttcgcgaaaaaccgcaaaaactaaaaatgctgacgtcagcaaaacttgtt ttttgaataactccagtttggccatagatagaaacatgaaatttggactg aaGTTAGACATCATTtaaaggatcattttgcaaaaaaaaatttttgaaat tttgctgacatcagtactttattgcaaaatttcgtattttgctgatttct gctgacgatAACAAAATTTCGNNgtttttcgcgaaaataagggcgtaaac aattaggtaacacccctacagcgaaacttcatcatggtatccttcgttgc aaatcattggtttcctcattttctgccggttaatggccttcaaaaattat gataattttcaggtttttgagacatgccataacttacctgagatTCTAAA TGACCTtacatacagtatatggcccccaaaacggagacggcccNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNggttttcatgcagcaaaaatt tttgtaaaatctcttttcctctagatttgagagaaattttaaatttgatc gccgttttgggggccacatactgtacgttaaaaactaaaattaaaaactc ATTAACAGGTTAAGAAGCGTGATTGAAGAAGGTGTCATATTTCCTATAaa tatctttttgaaaaattcttccactTTAGAAATTGCGAAAGATTTTAGCG TTGTGGTTTTTGAAGACTCAGACAAAAGATTGACATGCAATCGAAAACTA ATTAAAAAACGtcattaaagggacattaaagtagtaaaatgtaaacattg cgcgaaccacgtgtcattaaagagaacaatttaaatcacgtgtccaaaac aaacttgtaNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNTTGGtttgatgttttattttgacatgtgacatttgttt tgattttgtatccgctgcatacagtttgtttacaaatttcgcaagtactg ttatgtccctttaaagcaGCGATGTTATGTTCTGataaaaaaggaagaaa tttttaacgatttttgtaAATAGGCTAAAAATTTAATTCTACTAAGGAAA TTAAACCTCTCGTCGAAATGAATATTCCCACCTTATCCATACGTCTTTTT CCCTTGTTCCTATGTTCTAGTCTTCTTTACAAAATTTACAGCTTAAACAT CCCGACTCCTGTTACattattatctagcgctatcagtaagcataaaaaag ctgataatatgcagggaacgaggttggggcTGAAATTGTGGGTAGTCCCC CCCCTCATCCGGGGGGGGGACGAAGTCTGTAAAATCCAAGCCATAAACTG ATattgcttagcatatgcttaaccTTTTTTTGAGCCAAGAAGTGCAAtgg ttataaaaaacatgtatatcaGGGAGTAGAGGAACTTGCCAGGGGGTATT TCAAGAAGAATTTCCATGGGATCTAAGGAAAGTTTTGGTGTTTTACTGGG ggtgtaataaaaaaatattagaaacctactttactcttaggttccaaata gaCGGGGGAGGGGTTTAAATGGACGGAGGGGTAGGGGGTTggaaaagttt taaaactttgatAAATGGTGGGAACCTTATTGTCGGGAGGGGTTGGAAAT TCTAGTTCTGAAAACCAAAAAATAAGGTTAAATAAATAttggctaaaatc aggctatttaaaACAAACTATTTAGACCATTGTCGAAAgcttgaaaatat tctttaaaattaataaacagggggggggtcctaataaggtcagGGGGTAT TTTCGAAATACTAACAAGCAGGGCCCCGTTTATTTGGAGCCTAAAAGTCA AAGTAATGCTACAGGGGTGTTAAAATTAATCTAAAACTTTGAGAGGGTAA ATGACCTATTTTAGATCGTCCACCCTCATTTATTTGgcgaaattttccat ttttccaggCGGTTTCcacatattttcaagatttttgttttttactttga aaagttGGTCCACCTGTATGGATAttaaatggaacagcccaataaaCATT GAAATAACCTGACTACTGCATGCCCTTTTGTTAAAAAGGAAAGTTCTTCA TCATGTAAGGTCTTTATTTCTACTAATGCAGGGCAGTTAAAACAATGACC TACATCTCAGCTATTAAAAGACTTCAATGAAAAACTTTCGTATCAAATTA AATAGAAATTTGTCACGCAATGACGTTTGTAAAGCATAATTAACAactta atTATTGCATAATAATGCTTTAACTCAATAATGAagtcaaaattttactt tttctactTTCAAAGCAAAGTTTAATGTTAATGAGAGTTTCGCAAGGAAA AAGGAAGATTTTGTGCCCCTAAGATTTTGGTATAAATAGACGGTTAAATT TCTAGTTGATCATTCAAATTGAGAGACCAGTAGCAGTAAGAAGCAGTgga ataaagaagaaaatcaaagaaaaaacacACGGAGCAACAAACACTAATCA AAAGCAGAATGAAGTTGAACATGATATTAACCATTGCTTTTTCATGCATT GTCTTTGAAAACGTTTTATCGACAGTAGCAGGTaataattcaattttaat tttgcttTATTATTGAATTCTGCAACATCAGAATACTTTGATTTCAAACA ttgcttcttcatttttaaagcaaaaatagtcCCTGACAAGGTTTATGGTT GATTCTTGGTTGGTACNTTGTGATTGAATTCTGCAACATCAGAATACTTT GATTTCAAACAttgcttcttcatttttaaagcaaaaatagtcCCTGACAA GGTTTATGGTTGATTCTTGGTTGGTACTTCTTAACAACCATTCATTCGCT ACTTTTATTCGCTTATTTATATCCattcgtttttattttcacagtTGCAA ACCCTGCTTACATCGGTACATTTGAAAACCTCCAATACGTCAAAGGAGCT GGAAAGAATGATTGGCATTACGTCACAATTACATACAATGCTGCTTCAAA AAGCTACACATGGTCCAATCGAGCAGGTATCTCATGGTCATTGTATCCTA CAAGCAAGTCTGGTGAATTGAGAGTTGGACAAGATTGTCCCTATTACTCA ACGGGACATACAATTGCAAATTTTACTACTGATGGAGTTTATGGACCATG GAACGAACTGTATTCACGAAAAGGTAATGATTTTAGATTGAATGGTAAAA ACAAAGTTCACCTGAAAAGATTATCTTTATATTTTCACCAATTCCAACTT AAGGCCTCTAATCATAATTAAAGAATGATGAGTTGGTAGTTATTTTTGCT TTCTTAATGATGAAATTGTCATCTTAAGGGATTTTAAACTTAACTGGTAA AGTCAAAGTTTTACATCGATCATAGTTTGTTTTTCACTTTATAGTTGGAA ATCCATTGTTATGTGGAGACTTTGAGAATCACAAATACGACCTCAAAGGC AAAAACGATTGGCATTACGTTCACATTGATTACGATGAATCCACTCAAAA ATACACATGGTCCAACAGAGCCGGAGTAAAATGGTCCATGTATCAGACTA ATGTTTTCAACAAGTTGAGAGTTGGAAAAGATTGTCCTTATCTCAAAAAC GGATACACAGAAgctattttaaatgaaaatggCATCTATGGACCTCATAA GGAATTCTATGACAAGAAATagattttttctgcaaaattcATCGAACATA CACGTTAAATCAAAGTCGTTGGGAGCTGGAAAAAAGGTATTCCAATAATA TCtgaatttagatttttcttttacTAACTTAAAACCGagttgataaaaat aaatattatttcttaaaaattaactATTCTATAAACAATATTGTGTTTCT AAACGCTAGAATTAATGGATAAgttattgaaagaaaatatcGAATCTTAT CATTACTGTTTCGAACTCTTTTTTCGGCTTTTAGGCTATCAAATTCAACT CTTCATCGGCTCGCAGTTTATCGGCTGTATTTCGCTACACTGATTATTAA AAAACGTGATATagtttattcaaaatttgcatCGATGGAGAGTATTCCCT TTTCCTCAATTTTATAACGCGGTTTAGAATGTAAAANGTGCATCGATTGA GAGTATTCCCTTATCCTCAATTTTAAAACACGGTTTATAATTTAAAATAG TTTTCTTTTAGTAAAGGTTAACTTAACTGCATTTGTTCAAATGACACGAT TTACTATTTCTTATGCTTCCGCAACGGTCTTTGAAACTTTTAATCTTATT CGTAACAGTGATGTTCTGATTAAGGGTTCCTCATCTTTATACAATCATTG ACTTGTGACTTCAACACCAACAACAGACAACAGCACAGTTCT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00049233TCONS_00049233Clytia hemisphaericatranscript
TCONS_00049234TCONS_00049234Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00049234-proteinTCONS_00049234-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_154supercontigscaffold_154:748826..757467 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.32 0.2 0.14 0.06 0.67 0.3 0.85 0.87 0.49 0.44 0.27 0.65 11.95 11.69 1.07 2.51 1.1 1.28 0.29 0.54 0.49 0.79 0.34 0.5 0.96 0.64 0.31 0.19 0.2 0