XLOC_031282 (gene) - C. hemisphaerica

Overview
NameXLOC_031282
Unique NameXLOC_031282
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_154:660487..666267-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_031282 ID=XLOC_031282|Name=XLOC_031282|organism=Clytia hemisphaerica|type=gene|length=5781bp|location=Sequence derived from alignment at scaffold_154:660487..666267- (Clytia hemisphaerica)
GGAAAAGGGGGATTTGAAGGTAAAAACAGTGTAATGAGGAATTGAAACTA AACTTTTTTTAAAGTCAAGGAGAAAAAATCTTTTATTTTGTACTAGGACG CAATGGAATTTAAGTGAACAGAGAATCTTTTGTTAGCTATCGTGGTATAG AGCTGTGTCTTTATGATGAATTTAGGACCAATCTCAGCTCAGAGTTTTCG AAATTTTTAAGGAGAGCACACTTACAAAAATGCTCAAAAAGAATTTTCTT TATGATTGTTTTTGACTTAGAAGAAAAAATTCTATTTCAGTTTGGAGAGA AAGGTAGCCCGAGATAGATATGTGGATTTAAAGGCTATTTGGATGGATAT GTGTATTGATGAACCGTCGTTTGTGTAAATGAAGACTCTGGGAGATTATC ATTGATTTGAGAGTCATTTCATAGGATTTACTGATTCTTTTTACAATTGT TTTTTGTGTTTTTAGTATTTCAGATAAACTATAAAAATGAATCGAGCTCA ATTATCCTGGGTGAACCATGAGCATATAGGTAAGTTGCTGTTGAAATGTT TTTCCTATTTTAGTTGAATGCCGGGTATAAGTGTGGACTGGACCTCCGAA AAGCTACCCGTAGTGAGATTTTTTTTACTTTTTATGGTTTTCGAACCCAA AAGAACCCAAAAAGAAGGAATCCCGACCTTTAAAAAGACGAAAAGATCTT GATTTTCTGTTGTTATTGTAGTCTTTAGAGAGACTTATAGGAGGTAAAAA GNAAGGAATCCCGACCTTTAAAAAGACTATCTTGACTTTCTGTTGTTTTT GTAGTACTTAGAGAGACTTTAGGAGGTAAAAAACCAATCTTTACCATCCG CACATACCCAACACCTATTTTTGCTTAAGTACTTCCCCTTGTATGGATAG ATTTAATTTTGATATTGATTCGAGTCTTTAATAAGTCATAGTAAAAGCGT TAGAAAATTGATCGCATCAAGCATATCCGCCATCTCACCTCGCCTCGCCT CGGGCTTCTATATATTTCTGTTTATGACAGGAAAGGAAAAAGTCGAGAAA AATTCATTGTGATAAGCTTGAGGGGTAGATCATCTTCGCGTATTCACACC GAGACAAAAGTATCTATTATGAGGTGTTTTCTTCTTCCGAGGAAGAAGTT TTCTCAGTGTTTGTCGAAAATATTCCCGTGTTTCTTTCAGTTTTTTTTCA ATCATAAATCAAGAAAATTAGTGAAAACATCTGGATTTTTCTCTACAAAG TTCTCTCTTCCTTGAAAATTTGAATATTCTCAGTTTCACATGAAAATTTA GAGGGAATGATTTAAGCTAAGGTAATTGATACTGGTTATAAGAGAAAGCT GATGCTAGGCAAGTCACTTTGTTTAAAATTGCATACACACCCTTTGTTGG GCAGGAGGGGGTGGTGGGGCTGGGGTAGATATCTAGTTTAATTTTTTTAT AAGAACATCCAAAGTTGTGGACGCCTTCGGATGTTTTAGAAATTTTTCCA GTTTTAAGCCTAAAAATGTTCTCAAACCCTACCCTTAAGCTCGGGTCAAT CTATGGACCGTTAGCCTCTCTCTGCATGTTTGTGCTTTGGTTCTTTTGGC GAAAAAAGTTCTAGCCTAATTGCCATTCATCAATGATGACAATGATATCC AATATGATTAACAGTAACAGGAATCAACCCTAGAAATCAGCTATAAATTG CTTTTTCAGGAAGTCTCTCACAATATCATAAGAAACCTCAGTCTAGACGA CGCTTAAGATAATAAGAAATAGGATATAGAATTACTTCTCGGCTAAAAAG TATTGAAGGAAGAAATATATCTCTTGATTAAACTTAAAAAATATTTTATG AATTAGAGGTACAGACATAGTCGAAGGACTTGATCAAGTATATTTTATTT TTCTTAGCCCCGAAGATTGAAAAAGATATTCCATCCTATGCTGAGGAAAA AACTGAAGAAACTAAACCGTCACCTCCTTCATATCTTGAGAGAATTTTAT CCATGACTGCTGACATTGAGGAGATAAAACAACCTGAAGATGACGGGCAA GAAACGACAAGCGTTGGTGTATCAACCGAGGAATATCATGGAGATAATAA AGATATGACACCACCTGATTTGAAAGTTATGGAGATCAATGAAGAGGGAA TTGAACCAGAGGATGAACACTCAGAGATTTTAAGACAAGCGAAATTTGAA TGGCTGATTCCAAAAGATTTCGGAACCTTTCAGGTATGTTTACAATTATC ACAGACGTTTTTTGGACGTTCATCTAACGTTGGACGTTATGGGCGTTAGG CTGACGATATTTTGACATTTTGTGACTTAAATAAAAAATGAATCAAGAGA ATGAATTTGAAATTCATCCCAAAACTGCATTTAAAACTTCAAAGCAGTTC TTCTAGCCAGGGTAGATCCTCTAAAGAGCTCGCCTAGTAATCATGAAGCG CAAAAACCGTTTTTTATCATATAAAGTTGATTCGCGACATTGTCATCGTT CATTACAGGGAAAATAATATGCAAATGGTGGTATACGGAATTTTCTTCGG CTTTTGGGTTTTTATTCAGTGATTTGTCTTGACTGTAGAATTGTCTAAGT TGACTCTCGCAAATTCGAATTCAAACGGGAAGTCTTCTTTGTTCGAATAA CAGAGAGGTTGAAATTATAGAAAGTAATTTTCCCTACGACGGGAACTGAT AAATAAAGTCTATTCACGATAAGTGTGCACTCTTTTTTCATTTACCTATA ACTTTTGAAGGAATTCTTCAATCTTTATAAATTTGGTATCATTGTAAAGA TATTACTGAGTGGAACAATTTAAAATAAAAAAGTTCTTGAAAAATCCTAA AAACGAAGATGAAAATGAAGAAGAAAAAAATGAAGATCTTGTAGAGAAGT GCTATAACTTTCATTTTTACTGTAGTGAATCTTTGATTATTGAACGTCAT CACTGTGAAAAAATTTCTCAAATATAATCATTCAATCAAAAGATATCAAA CAAAGTTATAAGCTGATTGACGTCTAAAAACCCTGTTTTCTGCTGTTTTC TGCTGTTTTTTGGGGTCAATCACTTATCNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAATATCTT TCCAATGATACCAAATTTATAAAGATTGAAGAATTCCTTCAAAAGTTATA GGTAAAAGAAAAAAGAGTGCACACTTATCGTGAATAGACTTTAGTTCGAA TTATAGAAAGCTTCGAATAATAGAAGTTACAATTAGCGAAAGTCCATTGT TGCCTCTTTACTTTTTTTAGGTTGTACATTACGATCGGCCAACCGTTCCC GACCCATTCAACGACATTATTCAAAGCGTCATGGAGGAAAACTCGTCAAA CAAAAACCGGCTTTCGGTTAACCAATCAAAACGAGCTACACCTAAATCTC CACGCACGCCTCGGACACCTTTATCCGCGCGTTCAACTACAAGCGGTCCA CCAGCACCGAAACCTTTAAAAGGAAAAGAGCGCGTTTTGCACGCGGATAA AGTCTACAATTTATTAATGGAGCTCGATCAAAACAATAGAAACATTAGCC AATCATATCGCACGAAAAGCCCCGTTCTGGCACCTAATTGGCTGATATCT TCGCGTCCGATCTCCTCAAACTCTTTTGCGCCATTACCTGAGATCAATGC AACAACGAAGAAACAGAAAAAGAAAAAGACACAAAAAGAAGTCAAATTTA CTGTAAGTATCTATGACGCTATGTTGGTTTGCTCTCTCAAAGGCCTCTGT AAAGCCATAACACATCTAGAAAAATTTGAACATGAAGAATATTCCTAATA TAGTCTCACGCATTTAGTTGTGAAGATTTCAGGACGCTCTTGTTTAGAGC ACTCGTTAACGGTGCATAAGGTTGTGATTTCAACCCAACTGGGATTTACT AAAAGAATTGTAAATAGTACATTAAGCCTTTAAGACTCAGTGTAGGGGTA ATGTAAGTAGAGGCGCTCAAGAAAAAAGAGTGGCCTCACCCCTTAGCATA AAATATCAAAATTAAGTAAGAAAGCTAATTAAAAAGTAAGACTAGGTTCA CCCTCAAATGCGGTCACAAAGCTTTGGAACACACAATCTTTAACAAGTAA AAATAGACAATTTGAAGCATTTTTAGAGTGCTTTAAAGTGGTTTAACATA TTTCATAGGGTTAGACGTCTAAGTACTTTCGTAGCCTTTTTTATAAGAAC ATGCTCGAAAAAAACTTTCCCTGGTTAAATTAAATTAAGTTAAATTAAAT CTTTCGCTAAGTGATTACATTTTTGCCACGGTAAACAAAGTGCCAATTTG AGCCTGACCAATTTTACACCGCTTCTCAAGGTTGTACAAGTGGAGTCAAC TCTCACAAATTCCAACTTCTATATTTCGAAATAATCCCCTCAGTTTGGCT ACTAGTATAAAATGCTTTTTCTTTAATTCAAAATAAATTATTTGTTTCTG GAGGATCGAATTAGAAAGAGACAACTGTACCTTAATGGCCCAAATCTTGA GCATACGCAAATTTGGACTGGAAGTAACTACAAGATTAGGCATAACTTTA TCTAGAACATATAACGAAAAAAACAACATAAAGTTTTATTACAGTTGAGC CTTTATAACTCGAAAACATAGGGGCCACAAATTTGTTCGAGCTATGGAAA ATTTGAATTATGAAACTTCGTCTATGTTTGTTATCTGTGACAGAACCAGA AAAAATTTTCGAGTTGAGGAGATATTCGAATCATAGAGGTCCTACATATT TTAGAAAGGCAGGGCAGCGTCCGTTGATGGCCAGAAAGGGCACTTTTTCT TATGGTTTTCTGCTAAAAAGGCTGTTTTTACCAAAATTTTAGAGATTTCA GGAGGGGCGGCAGCGTCCGATAACCGGACGCTAAAAGGGCATGAAAAATT GCCTGTTCTAGATTTGAAGGCCTTCATTTTTTCTTATAACATAACATTTT TGCATTTATTTTTGTTTAGACTGAAAGTGTTCGGCGTACGATATCAAAGG TATTAGAAGAAAACTTGATAGACAAAANTTATAACTCGAAAACGCTAGGG GCCACAAATTTGTTCGAGTTATGGAAAATTTGAATTATGAAACTTCGTCT TGTTCGAGTTAAGAGGAGGTTCGAGATTTGAAGGCTTTCATTTTTTCTTA TAACATAAATATTTGTATTTATTTTTGTTTAGACTGAAAGTGTTCGGCGT ACGATATCAAAGGTATTAGAAGAGAACTTGAGAGACAAAGCGTACGACGC CGAATATTTCAAAACACATTTATGTATACTGACAGACATTATCAAGAGTA AAATCAAACGATTTTATGGTCCTCGGTACCGTGTCATTTGTAATATGAAC GTTTTCGAGATCAAAGGACAATCAGTGAGAACGGCAAGTCGCTGTTGTTG GGACACGGAAAGAGATAATTTTACGGAATGTATTTTTGAAGGGAATGGTT TTTCTATTACTTTTGTGGCCTATGGTGTTTACCTGGAATGACCACTGATT GGCTGAAATTGTAATCAAAGCAAAATTTTCC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00049307TCONS_00049307Clytia hemisphaericatranscript
TCONS_00049306TCONS_00049306Clytia hemisphaericatranscript
TCONS_00049305TCONS_00049305Clytia hemisphaericatranscript
TCONS_00049304TCONS_00049304Clytia hemisphaericatranscript
TCONS_00049303TCONS_00049303Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00049307-proteinTCONS_00049307-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_154supercontigscaffold_154:660487..666267 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.04 0.07 0.12 0.04 0.05 0.04 17.34 18.43 20.47 15.14 23.94 13.12 19.74 21.79 0.17 0.13 6.39 7.66 66.28 48.15 10.81 12.33 5.23 6.58 6.81 7.44 0 0.27 0 0.08