XLOC_031327 (gene) - C. hemisphaerica

Overview
NameXLOC_031327
Unique NameXLOC_031327
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_155:39329..48087+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_031327 ID=XLOC_031327|Name=XLOC_031327|organism=Clytia hemisphaerica|type=gene|length=8759bp|location=Sequence derived from alignment at scaffold_155:39329..48087+ (Clytia hemisphaerica)
CTCTGcatgtcaaattttaaaagatctTTATTTCAAGACTGCGTGATAAT TAACAAAAAGTAATAAGCTTTATTGTATTAAATTCTCAGCAAGATTAAGT TCGTTTCGCTATCTATAATCATAGAAAATGagaaatgtttttaaacttaT AAAACTTGGTTGACACGAAACAGAGAGTCTGTTTTTATTAATAGACGAAA AGGAGAGAAGTGATTTGTTGTATATGAAACTTTATTTGTAGTTTAGGTTA GAAGTGCACAATTTACAATCTCTTGTGCTAGATATTTCTTTCagccaata aataaaaaacaatgatGACACAATGATTATTTGTCAAATATGGACAGTCT actgttaaaggttttgtttttaaataagagtgatatcgtttgcttactcg tcaaatTTTATTCACACGCTTTTGCACgctgaattgacacggatgtggag caagattggccagacggaggaaaagaaaaacatttttttgcttatatcag cataatataaaaataggcagacactgtcctggtatGAAATATGTGCCTGA TATAAAACGGatacacttatgtaaaaagaaaacctttaactAAAACCATA CCTTGGTCTAGATATGTTTTTCAGCTAATAAATACAAAACAACAATGACG ACAGTATATTTGTCTGACGAGTCATCATCCGACAGTGAGAATGCATCAAT CCAATGTTTCGTGGACAAAGACCCGTCCATACCAGAATTCGAACAGGACG AACCATTCGATTACATATTAGTAGCAAAGAAAACGCAACTCGAAGAAAGA CCTcagaaattacaaaaagaatacTTGCAAACATTACGAGGgatgttgaa agtttctgagctCATCTTTTCAAAGgtaaaatgggcttttccagaaaaaa atcgtgcaccccctgttgaggaggtccatttccgttccaagggggtaagg tttgaaatgcagtggaattccataagggtagaccaaaatctgtcaaaaat tagcggaattccaagggggtaatgattgaaaatttgtaaaaatttggaAT TCCAGAGgagtatgatcctaaaattgcctggaattccaaggggtaggtca caaaaggttggacctcctcaacagggggtgcacggtttttttctggaaaa gccaaaTTTTATAGCTTATTATATTCTAGATATTATTTTTGTTGGGCTAC ATTCTGAAAAAGTAACATACTTCAGATgacttaaatttcaaaataagcaT CCGCTTTGTTCTGTTTTTGAAATAActttgaaaatctcaaaaagatCAGC GTGTGGAATACACGAGGAAATACGAAGGAAACCATAATTTAGACTTTGTT TTTCAGCCCTATAGGGATAATAAAGTTTTACAAAACCTCTTTGTAACCAA ATATTCGAATCTAGACACTTTGCTCTTACAtgtaatttgaaaaatgtgct aAATATTCGAATAGACAAGAACACAAGTGCGGGAATCAGATATCGATTTT GCTTTCTTAGGATGGCCGAATGAAGTATTGGAAAGTCAAAGCATCAACAG ACATCTTGAAGTTCGTTGCTGAGAAATATTGTGTTAAATTACCGACCAAA GAAGATAAATATCATGATGACACATGGTGAGTTTGACCATTCTTTATCAT Gttgatagatagatagagtcgatatttaacgtggatagcccagtaatcta ggacatttaggcagtctttcgattgttttcacggggtccacggccaaccg gctcggctatctatgaactgaacggaacattggaaggagagGGGATTCGA ACTGCGAATCACTGGTTTGAAACGCTGACGGCTTTGACCACTTGGCTATC GCTCCTAATGCGATCATCATGTGATTCACTTTCCaactaaataaaatttt gaatcatgttttaacatttttgcctCTGACTACGAGTATAGTAAAGGGAT AAAAATACCGTTATGTTTGTATCTAAAAGGGCCATAACTTTTGAGACCAA AAGGAACCTCTGCAAAGTCGAATTTCGAAGAAAAGGGCTCGGTCGTGAAC gttttaaaggttttcagaCAAATAactagccagtaccttcccacaaacca aattttttctttgttaaatcgcgataaaaaagcggttttcgtctaacagg ctaacAAATAACACGCGATTGATCTTTTATCTAACCATACGTTCTCTTGT TTTACCTAATCCTGGCATTGAGCTTGGCAAAGAAAGGGTTTTCTGTGTTG ATGATCTAGCAGCCTGTTGATGAATGAAGACCGTACAAGTATAGTTATTT TCCTCCAATCTCGAATGGAACCTTCAATTTGGttcaatttttcttccttt tcctttttaaaGGTATGATGTGTATTTAGACCCTATCATTGAGCGATGGA CAAACATAAATCCGTTTCGGAACCAATCATACGAAAATCGGTCGAAAAAT CGGAAACGGTATCATTACGATGCTTACACGAAGGCACGAGATAAACACTT TTTGAATCACGATAAAGCAGAGTTATTATTTCCACAAAAGTTGCGTTCGT ACTTGGTGTGGATCATATTGAATAATTCAACATTCGGTGAAGGAACATGT GGCAAAAGAAGACTTGAAGTGTtgatacaaaacaaaatattcacTGCTGC TTATCCGCTGCACGACGAGCTTACCCAATACAGAAGGGTGTTTTGTTCCG GCAAAAATCCGTCTCAAGATAAAGAAAGTAGCTTGCTAACCAGCCTGGAC ATTCAAACCAAAGATGAGAAGGGCTTTAACTTGCGTGAGAGGTTAGCTCA AAATTGGGCCTCCTTTCGTTGTATGTTTACCTATCAACCCATACATGATG TTTGCGATTATTTTGGATCGAAAATCGCATTCTATTTCCTATGGCTAGGT TTCTACACATCCTTTCTACTACCAGCTGCTATAGTTGGGCTTCTGGTTTT CTTTTATGGGTGTCTATCGAATCTCTGGTCTGTACCCATTCAGGAGATAT GTCAAGATGAGAAGCCCTTCCTAATGTGCCCACTTTGTGATAAAGTATGT TCTTATTATTATCTCCATAATACTTCGTGTATGTATTCACAAATGACTCG CTGTTTCGATAACGAAGCTACCCCCGTCTTTGCGATTTTCATGTCAATCT GGTCTGTGTTTTATTTGTCGTTTTGGAAAAGACGAGAAGCGAAATTCGCT TATAAATGGAACacgttaaattttcatgaaattaaaGTCGAAAGACCGGA ATGTACCCCCGAACCACAGATGCGACGTGTTTTCAAAGTGGCAAGCGCTT TTTCTGTTGTTATCTTTTTTGTTGCCTTGGTGATAATAACCGTCATTGGG ATTATCATATACCGAAGTATTctatttggtgtttttatttcaCAAGGAGG ACAATCTAAGGATCATTCGAAAATTTTCGTCACGGCCACTGCATCTTTCA TGAACCTTATCTTCATCAATATTCTGAAATACGTTTATTATTACATTGCT GTTAAATTAACGGACTGGGAAAATCCGCGTACTAAAAGTGGTTACGAAAA ATCGTTCACCATAAAACTATTCTGGTTTGGTATCTGTAATACGTATTCGT CTGTGTTTTACACGGCATTTTTCAAACATGAATATTTTGTTGGGACACCT GGTAAATACAAGCGTTTGGTTCCAGGCACTCATCGGATAGAAGGATGTTG GGAGCAAGGATGTTTCTTTGAGTTATGCATTCAACTATTAATTTTGATGG CTGGACAACAAGTGTTCTCAAAAACTGTCCAACTCTGCCAACCGTAAGTA AAGAGAATTTAAAACAACCCTGTATCACGTCAATTTTTTTAGCTAGAGGG CTCGGTCAAATAACGAACAAACACAGTTTATTTCATAAAGTCCATGGAAT AACTAAAGCATTTTCCTCATTCATACAATTACCGAGAAGACGACAGTTTT AAGAACAGTTCAGTTGAGCAATTAAGTCCTATCCATGTGTGAACAGTTGA CTCTCTAAATCGATCTGGACCAAGGATTTTTTCGCATTAGAGAAACATAG CGTCACCCCCCCTCCCCCACCTGCTGGTTGGGAGGGTTACAccctaaatt tttcccaaaaaaggatGGGGCTGGAAGTACATCACTTTTTTTGGGGGACC TATGCACTTGGGGgaagctaaaatctcatcacttaacgtgggggctaaaa taattcaactTAATACaagttggcttcaattactcaaattgaagctcatg aatgtgaaaaattttcccccttttgaaaaatattttatctgaATCTTAGA ACAGAACGCAATTTACATTGAAAAACCCTTTTATACtgggatcaattttt tgaaattgtctagggtcaaaagtcctgggggctaacaaaaaattcataaa tctttggggggacttaaaactcaggggggacctaatttttgcctagGACC TAAACCCAGGATGACGCTATGTATATAAGGTAATGGAAACGCGTTCCCTT ANagggttagggttagggttagggtttatgagaaagattaaaaattacat AGAGTATTTTTTAAACACATTTGCACCTTAGGGAACAATAACATagctcg aattacagaaagatccCTTTTGGTATTAGAGGTATAAATGAATGAGAGGG AGAGGGTTGACCGTAATAAAATTATATCCACATATCCGTCACCCTGGTTC TTCTTTCGACAGGTACTTAAAGCGTCGCGTTTGCAATTGGTGGTACGGTG CAAAGAACGTTACGTCCAAACCACAATGGGAAAAAGATAATTCAAAAGAA TGTGAATCCAATTCGGTTTTCCTTCTTTTCACTGAATACCAAGATACAGG TGAGATATTATTCAGTGTTTAAAGTTCTTCTGTCTTAGAAGCATTTCCGT CTCAGTGAGATACAAGAAGAGGTTTCNCTCAAAGTTCTTCCGTGTTAGGc ggatttccgtctcagtgAGATACAAAAAGAGGTTTCTCCGTCTCTAAATT CAACAAAAAGACtggttttagttcgtccaccgtcaCTTAAAAGTACGAag acaattttttccaaggttttctTTGCAAAGTTTGCTATTTTCCatggggt atccacacatttccaataattttttctgacttgaaaagatTTGGAATTTt gatggaacagcccattttgCAAAAAGAATTCAACGATTtctaaaaatgag tctttcTGATTTTGGAATTCATTTTTTGGGCAATGCCTACTTTTAGCATT CCAGTTTGATTCTTTATGACATGCCTAAACATATGATATTAAAAAGTTCT GAAAGCTCTAGaagataaattatttttcccCACATTTGGACCTTGTATTG CTTGAACGGAACCAAAATGCAACGTCTGCAATATTTACTCTTTAATTTCA GCATTACAGTATGGTTTTGTGACCATGTTCGTTGCAGCTTTTCCACTGGC TCCTTTCATTGCCCTCATTACAAACGTGATCGAGTTGAGAATCAGTGCTA TACAACTTGTGTTCCATTATAAGAGACCTGTAGCTTTGGATGCTTCTGGA ATCGGTGTGTGGTATGATATCCTCAACATCTTGACCACTGTGAGTTCCTT ATTATTTGAGTACCCTTCATGacgccaaatttttttttccgatcACGAAA ACTCCCAAAATTGACTTGTCACCTAGCCCAAATCATACATCACACCAAAA ACGCCATCAtgccaaaaaaagtaaaatgagCCATCAAATCAAGCCATCGC GTAAAATGTCTTAATCCACAAGCCACTGGAGGCCTCGTATACGAAAGAGT CTGAAAATCCAGCGAATTTTTGCAAAACTTGAACAATCAAGGCAGATTCG CTGTATTAATATCAAGTTTCGTAAGTAAGGTTTATTTTGACCACTGACTC TCATTTCCAATAGCTATTCCAACCTCATGTCCCAGGACGCCAGAGCAATT TACATCACTTTTTGGTTTTCTTGATAACCATTAAAAAAGTGTACTTAGGC ACTGGGTACAAGTTTGATAAAATCAGCAAAATGGAGGACAAGGAGCTAAG GATATCTTCTTGATTTCTTTGCAGTGTGGCGTTCTGATCAACGGATTTGT TTTATCGCTGACTTCGGAAATGATCCCTAGGAGCATCTACAAATATTACT ACAACGAAGCGACCACGTTACAAGGATACATTGATTGGAGTCTCTCAGTA TTCAACGTGTCTGATTTCACAGAACAAGAAAGACCTCAATCTTCTGGAAT GAACTTCAACGTCACGCAATGTCGGTAAGaacttcaaattcaaatttaaa gatAGTTTATTTACCCaaacataaaattaaaaagttacaaAACCTGAAAG TTacagtatttttttataagcgaGTATCTGCCCCTATATCAGGCATTATG CTTGCTATTTttttgttctcaaacaatagagccattgtttaggtacccaa aactgagcctgcatatgcttataaaagaaaaaaaacatatttataaAAAG GTTGCTGGAGCATCTTTCGAGAACTaatcgccgtgtcaattcaagacaga cctaagtccattttttcgaaaattgacctaagtccattttttcgaaaatt gacctaagtccattttttcgaaaattgacctaagtccattttttcgaaaa ttgacctaagtccattttttcgaaaattgacctaagtccattttttcgcC TATTTCAGCATGCTGGAAAGaggtgtattttgcaattcaaaaaataagaa tttagaatgttccataatatatcaaccataaacagccttaaATCCTAAAT TCCAGTCATCCTAAAGTCCAACACATGTcaacctttaaagtcaattatct caaaatggaaaaaatggacttaaggctgtcttgaattgacatgGCGTAAT ACTTCTAATCCATCAGTTATGTGCTGCAAGATAAGTGCCCTTCAAGAGTG CTCTGTGGGAGGAGAACATTTCATTTTGTAGACCTCAAATTAGCCCTTTC ATAATCTGCGAACAAACTTGACATTGAGATATTTGAATACTGTATCAAAT CAATTTTGCCGGGTGCAATCAATTAAAAGTCAATGAAAATGACCTCTCTT GTCACATTTTTTCGAatataattttccaaaaatctggAAACCTCTGCTTT GGTATCTCATACTCACTACACACATATGTCCCCAAGAAAATTTTCAGATG AAAAATTGCTTCAAATGGGATTCTCATTTCTTCATTTCTAGGTACACAGG TTTCCATAAACCAGAAAGCCCTTACCAATACAATACAAATCACTGGTTCG TCTTAGCTGTACGTTTCGCATTTGCTTTGTTCTTTCAATGGACAGTTTTC ATTATCGGCAGAGTTTTGGCAAGTTGTATTCCCACAACACCGGCTACCGT GAAAGCGAAAATGAGTCGTGATCGGAACCGCAAATTTAGAGCTTTGAACC GGTACCGAGAACGTATCAATCAAATGCATGACGCAATCAGTAAACagaaa aagaaagtgaagaaaatgaagaaattatcAGTAGCACCCGTTCAACAGCC GGTCTACCCGGATCCGGAACAAGTTCTACTTTCAATCCAGTTGGGTGACG AAGTTAAAAAACGAGTGCTTCAGAAATTGAAACGAATGGCTAAGAAACCA TGGGATACGTTTGTTGAGCAGCGGTCTCGATCAGCTACAAATGTATCTCA GGGTTCAATGCTTTCTGAATCTGGACAATCAAGGAAATCTCGATCTCCTA CAAATGCAACACAGCTTTCAATGCTTTNAAATCGAGGAAATCTCGATCTC CTACAAATGCGACACAGCTTTCAATGCTTTCTGAATCTGGTCAATCGAGA AAAACTGGAGGGCTTGAGGTTATAGAAGAACCAACGGAAGTTGAACGTGA AGACCTTTTTGAACATGAAAGCGTGGCCTCACCAAAAAGCCGCCGTTCCA AGAAACGAAAATCACAAGACAGTTATAAAGAGGAAGAGGATAAAAGGCGC AGGAGTAGATCGAGAAGTACTTCAATCTTTGATGTTTTGAGACGAAGTTA CTCTAAACAATTTTCTAATGATGGTTCCATTCATCCATCAGAGCATGGGA GCGAGAATTGGCcttcagaaaaaatgaaaagaaaattgttgaagaaaaat cgaaaaatgaaatCTTCAGAGAATATTTTATGTGACTGTGGTGATCACGG TATGAAAGAAACAAGCAGTTTGATACAGGATGGGCGAAGTGATCATGATG ACCGTATTGAAGAGGCGAGCAGTTTGATACAGGATAGTGGGCGAAATGAT GATGATGACCGTATTGAAGAGGCGAGCAGTTTGATACAGGATGGAGAGAA AGATGAAGAAGATAAAACTCAGCATGTCGATGACTTTAAAGATATCTCAT TCTCGTGGGTTTGATGGTAATCAGGTTATCCAAGTAAACATTAAAATCAC ATAAATACCATGTttcattgtgtgatgacagtttcgttgataaaataaaa acttcttttaaaacttatAAAGGAATTGTTACtcgaaaaaaatagatttt gatAAATTAATTATTTAAATGTCACATTCGCGTCgtcgaatatcatcaag ctcgactgaataattttcgatatccgatttttcttgtcgaatatctgctt aatatgTTATGTTAGTACAACCTAAAGAGTCGTATTTATTTGTAAACATT TTTAGTTATTATAGGTATTAATTAcatgaattcaaaaaaaatatatcgtT AGTTACCCG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00049356TCONS_00049356Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00049356-proteinTCONS_00049356-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_155supercontigscaffold_155:39329..48087 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.19 0.11 0.1 0.11 0.32 0.29 0.32 0.35 0.13 0.17 0.09 0.38 1.64 1.18 0.08 0.09 5.81 6.88 1.94 1.61 9.4 8.31 2.9 5.14 5.28 6.63 0.78 0.42 0.05 0.06