XLOC_031374 (gene) - C. hemisphaerica

Overview
NameXLOC_031374
Unique NameXLOC_031374
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_159:46946..50549+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_031374 ID=XLOC_031374|Name=XLOC_031374|organism=Clytia hemisphaerica|type=gene|length=3604bp|location=Sequence derived from alignment at scaffold_159:46946..50549+ (Clytia hemisphaerica)
CTCCAATCTCATGCCGGCTATCCCAGGAAAAAAAGCGGAAATATTCCAGA
AAAGTGATGCCAATATAAGTGTGGAAATGGGAATGTTATACAAAACGACG
ATGGTGTGAGGTGGTGTGGGTTGGGTTGGTGTAAAGCTATACACAGACAG
AGACACAGATCAACACCAACACAGACCATGCATGGTCCATGCCATCATAC
ATAAACGCAAAAAAGCCAGCTTAGGTTAGCTGCAcacaactcaaccaaat
agaaatttgTGAAACCGAAAGTTACAAAAATGAATACAATGTATTCAAAA
CAGAAACAGAAATATCCTTACCAAAATGCAGGCGACCAAACTTTTAATGA
CTCTTCTAGGTCTTTTTGTTGTGGTTTTGGgcctggaatttttttttaaa
tttcaacacCGCCATCATGGTGTTTATGAAAATCGTCTGCCGTAGGATGA
GATACGTTTTCGGTACGCGAATTTCTGTCGTGCTGTAAGTTTTACAGAGT
TTATCAGAGTAAGCTACAACGCTTTTGATGGAGCCACGTAAGTACGTCGC
TTGTTTCTACCGTGTCCCGAACAAAATGGTGGAAAATGTCCTAAAAATTT
TAGTGGATACACAACAGATGTTTTACTATGGCgatttgaagatttttatg
TAGTCACAATTTAATCTTTTCTATCAAGTCATCAATAATTATTATCCTCT
ATATTTTGCTGTCATTTGTTTCAATATAAATTAAAATGGACTTTctgact
tttctttttttttaaagtgaaaatcaaaatttaaaatgtcagGATTATTT
CTTGGAAATCATGGTGGTCGTGCACATTGTTACCGATTTTTTGAAGACAT
GATGTTGTGTGTCAAAGAGGAAGGGATCCATAGACAGATATTCAAATGTA
GGGAGCCAAAAGATGACTATTATGAGTGTGTATTGCACAAGAAAAAGGTA
TCACTAATCTGATTCACGCACCATGATTCAAGAAATGTCAGACacagaat
gttttcaatgctATATAGCAAACTTTTGTTTAAATTTGTTCCAAAAGCTC
Cccagaatagaccttttttcaaagaggccaccctgttgaataattatgta
gtccagcaggaAAACAATGcaataaaaccatgcataattattacaataat
atgcatgatacagtgaTTATGCATGACTCTATcgttgtttttatggctgg
actacataattattcaacaggacgtcctctttgaaaaaaggtctatttaa
aaCAGCTAAATTGAAATTATGATCAGTGGCACAGTGTGAAATAATAAcag
aaaatttgattggctcTGTTTTCAACTGCTGTTTAGACCTGggaaaatag
accttttgctagacGTGATGTTATGTtggataattaaaaactccagctct
aAAACAATGACACATTCAATGAcactggtccttaaaatacaaagttaaat
caaaacaaaaatggtagtgtatagctgcgagcagagctgcatagttcatt
tgttttgaaattttgctgctttgattggtctgtcatttgagggctatgca
tgttagcctacactgatgcaagttacccgacttcacggtacttcagcaga
attttttttaatgataacgTCATCTTATTGTTTTCTCCTTTACAACACAG
CAAGTGATCTAgggacaaaataatttttcctgtTTGTACTGGATGAGGGA
AAGAAATGTATGTGgaataatttgttattcaatagatcATCCTGTTCTCC
TAAATGACTACACATGgttctatataagaacataaggctttgatggccaa
aatgttaagaacaagttaagaaagaacatttttttttaaggctttgcact
GCTTTGCAGACTCTGACTCAGACatctgatttcttaggaaaatgaaaaat
taaatgctcaaaaaatgatgaaaataagaacatgttaagaacatttttag
gcttgtaaaactaaaaaagttaagaacatccatagGCTTCAAATattctg
gatgttcttattaaaaaaacgtgtattctttaCCATCAGTAGAAATCATA
GCATGATCTCCAAGTTATAGCATAGTGGGCagcacccctccaacccccac
ctgaataaagtcacccccacctgcatagggtaacccccacctgaaaaatg
ctaCCGACCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGGCTACTTC
ACAAGGATCTGATAGTCGTTTAGGAGAATGTGACAATCTATTGAATAATA
ACATTACTTAGCCAGTACAAACgaaataaattatcttgtccctAGGTAAC
Tgctgttaaaaaaaaatcaattatatgacattatcattaaaaaaatttat
gctggagtaattagttattaacAGTTAGGGGAAGTGGTTCAATttttaaa
ctgatttttgaaaacatgaaccAAAATTTATTCTTGttattttttgatga
tgtaATCCTTTTGAAGCAAGAAAGTTTGACCATGCTGATTCAACAAATGA
AATGACAACCAAAGACAATCCTTTTAACAGGATAGACCTACCATGATGCA
TCCTGTTTTCATGGACCAaccaaaactatggtcaaactTTGAAATATAGT
TTAGAAGCGTTTTATAAAGGTTTGCTTGTGAAAGTACATGACAATCCATG
GGAGAAGTCTTGAGATATTTGTAtgacaaacattttcttttgtctttttt
atagatttcttttttttgtgtCTGATAAAACCTGATTTTGATAAGATAAA
GAATTCAACTACTCCCACTAACTGATTAAAAAGACTGTTGCGTTATCTCA
AGCGACTATTGCGTGAatataaaaacacacaaaattcAATCAAACCGCCT
AATTGATCGCGACACAAAACGGATTGCAAGCTTTATGTTCATTCCAATAA
CAGGAAAAATACACGATCTTGGCATGAAAGCAAGGGAACCAACCAAATTG
GTTTGGATAGTTCCATCCAGCAAAAATAGCATAAAACCTTGGTCATGCCA
TCGCGTAAACCGCTCAGGGCCTCCTAGATATCTTTCGATGCTATACTGTA
GATGTGTATGTTATGTATAGCAATGTTATTTCTCTTACAGATTGGGAAGT
ACAATGCAATTAAAGAACAAAAGGCCAAATTAATCAAGGAAGGTAAATGG
CCACCAAAGGACAATTGAGAGTTGAGCATTTATTGTAATTTTAATAAAGT
TTGTCTTAAAAGAATGCCattattttatcaaatgaaTTTGACTTATGTCA
TGTCCAGTACTCATCCCGGAAACCAGGCAATAAATGCTGAAtcctttctt
tttataaatcttATAACTGTAATGGTACGGTGGTAACAAAGTAAACTAAT
TTTAGTGATATCtgccttaagtggataaattttggcgtggattaatttgg
cgaatgaccaaaatgcgatttttggcggggatttaatttggcgaatgctc
aatattgtaaaaattggcggggatttaatttggtgggTGGGAAGGTTTTA
GTCTCTGGTAAACTAAAAAATACGTGGGATTTGACTAAGAAATGCTTATT
CTCC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00049424TCONS_00049424Clytia hemisphaericatranscript
TCONS_00049425TCONS_00049425Clytia hemisphaericatranscript
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_159supercontigscaffold_159:46946..50549 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
62.33	54.97	81.92	105.19	65.06	48.97	80.9	87.79	86.55	59	61.35	80.36	53.65	56.14	71.68	68.49	106.24	110.28	38.53	35.64	118.13	113.15	68.82	63.92	93.26	88.36	91.21	80.55	72.98	54.73