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Sequence
The following sequences are available for this feature:
gene from alignment at scaffold_16:98557..109675+ Legend: gene Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_031389 ID=XLOC_031389|Name=XLOC_031389|organism=Clytia hemisphaerica|type=gene|length=11119bp|location=Sequence derived from alignment at scaffold_16:98557..109675+ (Clytia hemisphaerica)
aaattcAAGAAGAgtagattttaataaaaatctgtaaaaattccaaagaa
aaattaatGGAAAGTATCTGTGTATGGTCAACACACTTAACAAAGTCCAT
GTAAAAATCNGATTCTAAAGAAAAATGTATGGAAAGTATCTGTGTATGGT
CAACACAgttaacaaagtccaaaaaaaataacTACTAATCATAATGATTT
AATATCTGCTAGAAAATTTCAAGCTAtctacaaaacaaacaaaaacataa
aaatatgcCAATAAAACATTTGGAATAGAAAAATTATTCGATTGTTATTC
GTTTGAATTCCTTGGAGGAGCAGGAGGTATTGGTGGTAACCCCTGGCGAC
GTCGTTCAGCTTTCAACTTATTGAATTCTTTCTTACAGTTGCGGTAAGCT
TCAAAATATTCCTCACATTTGTCTTTATCATAACCGTTATCTGAGAGACA
TTTGTAAGACGCATTAGCCTCATCCAAACAAAAATTAACACCACGGTCAG
TCCATTTACGCGGGGTACCTGGACGTTGTGGTGTCCTTGCCTCTCCAGAC
ATCTATTTGcacaaattatatatttttgttgtttttactttaatttgtgc
tgaaagtaaaagaaagagaagcataatataataaatataacaaaaaaaat
gGTCAACTGTTCAGGTTTTTAAAGACACTTaacataaaatattgaaatac
aaaaacaaacagaaaaggTAGAAAATTctcaacaaaaaaaagttttatgt
gataaaagtgacaaaaaaggtatttttttgaataaaacttTAGGGTATCC
ATGACTCgtaacaaaatcaatttttttatcaattaaaaAATGTTGTATCT
TCTTAAGTATAATCTAAAGTGTggttaaataaaataataataataaaaac
agCAATGACACCAATGGTGGATATGTCCCTTGTATATTCTGTATCTGAGA
ATACTGAATAAGCCTATTGCAAAATCAAAGTCACATTATAGTACATACTC
TATTGTTTATTCATATCCAAGCAATTTTGAATTGGGTTGAGTGAAAAAAG
TCCCACGTATATTGTAGATCTAAGAATATTGAATAAACGTATTGCAAAAT
CAAAGCCACAATAGCACTCTATTGTTTATTTAAATCCatgcaattttgat
ttttggtaaacTAAAAACAAGACATCAAATGGCTAAAACATCAGCTGCAA
TTTCATGACTGTGTTGTGTTTGCAAGTCACtcagtttctttttcaaaaca
gaaAGTCCAGACAAGATAATTCTTTCAGGTCTCAGTGACCCAGATGTTTC
GACATTGAAAAAGAACTTGTTTGGTTTAGCACCAACATCAAAATCACCTT
GTGTTTGATCCTCGTCAAGTTGTGAATATTCACTTTTAGGCCATTCCTCT
GGTCTTGGATATGTTGTATGTCTCATCACATTATCAGGATCGTACTCAAA
AGCCACTCCAGCTGTTGGATTCCATTTGGCATGCTCTTTACCAAACCCTT
TTTTTGCATAAGCACGTAATTTCAGTTCTTGACCTTTTCgaagtttcaaa
ataatgatATCGTTATTTTCCTGCATGTCACTATCATCATCTTTGTTTTG
AGAAGTAACTGGAACAATTTTTGGGTTAGCTGATATCAAATCACGGCTTG
TTATACGTCTTGTTGTATCTTCAGTGCATTTGACCTCAAGAGTGAATTCT
ACAGAACACTCAGGGCAAAAATCAATACATGTGCAATCTCTGGAGTAGCT
CATCCCTTCGACTGATTCATCACATGTTAAAGGAATCAAACCAACACGAT
GGGCTATAAATTCATCATGTAGTACTGaagtattattttcaatttgaacc
CAATCAATTGCAATAGTTGGGACTTCTNTGAATAAACGTATTGCAAAATC
AAAGCCACAATAGCACTCTATTGTTTATTTAAATCCatgcaattttgatt
tttggtaaacTAAAAACAAGACATCAAATGGCTAAAACATCAGCTGCAAT
TTCATGACTGTGTTGTGTTTGCAAGTCACtcagtttctttttcaaaacag
aaAGTCCAGACAAGATAATTCTTTCAGGTCTCAGTGACCCAGATGTTTCG
ACATTGAAAAAGAACTTGTTTGGTTTAGCACCAACATCAAAATCACCTTG
TGTTTGATCCTCGTCAAGTTGTGAATATTCACTTTTAGGCCATTCCTCTG
GTCTTGGATATGTTGTATGTCTCATCACATTATCAGGATCATACTCAAAA
GCCACTCCAGCTGTTGGATTCCATTTGGCATGCTCTTTACCAAACCCTTT
TTTGGCATAAGCACGTAATTTCAGTTCTTGACCTTTTCGAAGcttcaaaa
taataatatcgTTATTTTCCTGCATGTCACTATCATCATCTTTGTTTTGA
GAAGTAACTGGAACAATTTTTGGGTTAGCTGATATCAAATCACGGCTTGT
TATACGTCTTGTTGTATCTTCAGTGCATTTGACCTCAAGAGTGAATTCTA
CAGAACACTCAGGGCAAAAATCAATACATGTGCAATCTCTGGAGTAGCTC
ATCCCCTCGACTGATTCATCACATGTTAAAGGAATCAAACCAACACGATG
GGCTATAAATTCATCATGTAGTACTGaagtattattttcaatttgaaccC
AATCAATTGCAATAGTTGGGACTTCTGAAATGAAGATCCTTCTCAAACCA
TTTGCCATGGACAAATCAGTATCCTCAAGTgtgaatttgatattttcatc
acTCAGTTctgatattttgacttttggttGACTAGCGTAAGGCATCTTTC
TCAGGAGGGTTCAATGATAATTGTATATGGTAGTTTTAGCTGAAACATAA
TGTCAAAATGGTCAAGGTTCTAGGCTAAAAGAGTTTTTCCAGAAACCAAA
TTAAGATAAACCCAAAAACCCTCTGAGCTTCACAAAAGCAGAtagtttac
agaaatctaaattcaaaaaaattcaagaactgtttttgaaacatttgaaa
TGAATAGGGTTGGCAGTTTTGAATAGCTATTTTACCAAAAACCAGACTTA
CGTCCTGTAGTTGAATACTTTTGAAAACCTGTTCTCTGTTATTATCGTGT
GTACCTGGGTTGGTAAAATTGCAACATTCCCAATTAAGATTGATTGTTGC
AATGtaaaccaatttttttcaaaacacaagCAAAATCAGGTTGAAAAAAA
GCAGCCTTACtgtaggctgcacacatcccctctgatatgatagGGAATGC
ATATTGTCTACAATATTTCTGTCCCAACTTACCACTGTAAACCACCAAAA
CTTAACACTGTTGCAGAATTTGACAATGCAGAAATTGCAGAATTTTTCAG
CACTGCAATTCTTTACAATTTCCATCAGTTTTCAGAACTGACGACTGATG
TGGTGGTTGGTGGAAACATGCTGAATGTAATTGAATTTGNACTAACGACT
GATGTGGTGGTTGGTGTAAACAGGCTGAAAGTATTTGAATTTTATCTGAT
CAAAATCAGTCTAGGATTAGGAATCCTCTAAATTATACACTTAACTTCTG
AGATCTAAACTCTcaattaccgtcaactgctctaatttGAGACGATTGGT
CGAATTTGGGACTGGTTGAAATCTTGCCTGTATTTTCAACTACTGtgaaa
tctctttgacaactccatcaagtttatcaatcatactttctgtcataaca
ataacatgtcacgataactttcactgtgATAGCgagccctttttaacttt
tttgtttgaattcaaaaaatgaccggacgccgattggagaattacaGAAC
GCCTGCCGCCTAACCACCTATTGCtcaatgggattaacaaatagcgagtg
tgtaacttgccactaatttggtcttcttcgttccagacattcgcgtgtgt
tccactacaaatttttttcatatttctatttaaaagcctactcggtgcga
aagagaagtcgtgtattttttaatacgccgttcattaactcaaaatttca
tttttttttctttattgaaacaaagacaCATGTACACTACAAACATAAAT
tagaaaacattacttaaacataaaatatagtccctccccccgctaggaac
taacgttatatcgtcagaggtactagacttcttggagaaggaagctacaa
ttgttaggtaaaaaaagcctaaaataaagcaccactaaaccttccagttt
cgttaagaaattcaacaacagaacaaagaatagatttatttagatttgaa
tcaaactttcatccccatactgccccatataataaaagccgacagaaaaa
aggagggttaagtgTATGAAAAAcaatgcctagggtctgaagtttgtcga
acaaagattgtcttgcatgggaatatNAGGGTTAAGtggcggatgaaaaa
taatgcctagggtctgaagtttgtcgaacaaagattgtcttgcatgggaa
tatatagagcagtgcagaagaaagtgctgaatgttttcaacagagttagt
tcggcaaccacagaaagggttgtcattcttctagcaaagcgcctgtcagc
aagactttcaagaccaagttctgaatatagtttttcttgagacgttccac
gaaaacagcctgttatagctaaacaggcattatattgaatagacTCAAGC
TACTGCACAAAGGTAGCATTTCCTGGGCAGTCATATACAatatcaccata
atcaagatgaggcctaatgaaagatttataaatggttGGTAGAGATCTCC
TAGGCACATACTTGCGAAGTCGGTTAATAAGACCAATTCCTTTATTGGCC
CAGATTGGCCTTTTGTATCTTCTCATTTAGATGGCGATCAAAAGAAAGAA
TCTAAGATTAGACCAAGATGTTTCTGGTACTCAATGGTCGCGATATTAGA
ATTATTAAAGGAGATTACTGGAGTGAGTCTACAGGTAAAATAGACGTCAA
CAGCTTGCTTAGATGGGTCAGggttaaaagacatcttccattgatgagcc
caaTCAGTTATCCTGGAGAGATCTCTGTTAAGTACATCAAGGCTCAAGAG
TTGATCAATCACAAGAGAGAATAAAGAGGTATCATCGGCAAAGATCTTGg
gttttgactcaaggttttttggaagatcattaatataaattaagaaGAAC
AATGGACCAAGAATCGTGCCTTGAGGTACCCCTGCATAGATTAGCTTCCA
CTCAGATGTTTTACCCAATCAACACAACTCTCTGATGCCTATCGTCAAGA
AAGCTGCGAATTAAGGAAAGCAACGGTCCAGTCACCCCATNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNATATCTAAAAACACCCCCCTGGTATCTAGAGAAGGATCTT
TGTCAAACCCTGTATAaatatcatgcgttatggataacaactgagaaatg
caggaatcccatgttttgtcagatagtcccaagttagagcagttgacggt
acatggCTATCAAAATTGTAGAATTTGTTAAGGGTGCAATTATATACACC
CTTATTACTATTTGAATAAACGGTAAATGTGTAATTGCATGCTTAGGCTG
CGGTCACAAATAAGTTGTGTTTGCGTTctccgaccgactcactttctatt
ttcaaaatctgacCCTTTTCTACTTGGAAAGTCGGAAAATTTGTCCAATT
TTTAGCGATattatttaaagaattttgtaGATTCAGCTTAGCCAGCGTTT
TGATCATTGAGTGTTTTTAGAGACACTCATCGAGcaattttttatagatt
ttttgctttaaaaagttNGAGACACTCATTTTTCACTcacttatttttta
aagattttttgctttaaaaagcgcTTTTTGTGCGGTCGTGATATGTAAAA
TAATCACATTGCAGCTTGTGCGCTCAATGATTCTTTGTCGCCTTAACAAA
CCTATGCTCAGAGCGCATTTTTCTGATGATATTTTAGCACCGCCGGACCG
CCTATATTCAGAgtgcatttttctgatgatTTAAGATGTCGACCAATCGA
CCGACTCATATTTTGgggctggaaaattttttttggaccgaTTTTTTCCA
CGCTTAGCGTCATTCCAACACTAATTAAAAAACCCACCCACCCCCTACCC
TTAGGGGTCAgtcacaaattgattttaagttagaagaacgtcaattgacg
tatatgggtgggtgggttaaaggttgttgacgtttttcagaaacatcaaa
catttcattctcgccatgtttctgtttgatcgcttcttttgttttgaaaa
ccaaaactaacggcccgatgtttatgtcttttctttgtttgacggcccga
acggcccttgaatttttgcagatcgccgttctttctgtcgctacatacta
cggagataattaattacgggaattttgtgaacaagtttagaaattatctc
cgagccgtagtgaaaatcaagatggctgacgaaacagcaaagaaggcagt
ttttatcaattttcgggatatcaaggtgtttgacgtttttgggtgtgggt
gggtgggtcagcttttaaaacgtcaattgacgttcttctaacctagaatc
gatttgtgactgacccctTAGCGTCATATTATAAAATATACCGAAAATCG
atgaaaaccttttttccattcTCACTTCTGGTATTGATGTTCCACTGCCA
GAGACGTTTCTTCTTCCTTCTGCCTTGtacattttgcttgtttttcgaGT
AGTGGTTTCTGACTTTTACACAGATTGGTTCCCAGACCCGCATAAGTTAT
GACACGGGAAAAAAAAGCCCCAAACTTTTTTAACATAATGAGTGTCTCCG
GTATTTTTTTACTATACCGGTTTATTCTTGATGCCGTGAAAAAAAGAGTT
AtagttttctggaaatttgatcATCTCTTGGGCCTCAAAAAACGATATCT
CTAGATTTTCTTAGCGTCACTCGATCTAACCCACCTACCCTAAAGCATTG
GAATGACGTTAAGCGTGGgaaaaatcgatatgtgagtggccccttcatgg
gatcatcccccccaggaagatgggggggaatcagattttggtgccagggg
ggaagtgaaaatttcaagcttgNtcgggtaacttgcatcagtggaggcta
acatgcatagccctcaaatgaatgacctggctggtcattaaaatacaact
acgcagctccgctcgcagctctacagtactctaccatttttgttttgatt
tatttttgtattttaatgaccagccaggtctttcatttgagggctatgca
tgttagcctccactgatgcaagttacccgatctcacggtatagacttaaa
cttgtatatcaggattacgggatttcgagtacgggccgattttactttcg
ttttgagtggtttcattttcaatttcaagccaacatcttagcaacggggt
gctcgcccatagttgtACAgggatttgtgcaaaaaattaaacatagaaaa
ttttccaaatcccccattttgattaatgcaatgaaaaatgaaacttttct
atgtttcacttttttggcacctattcttcaaaatgaaaatatttaagatt
ttaagttcttcttttattcaatgattttttacggcacttttttgacaatc
taactctcgcatcaaattctcgctttcttcagtaaattgaagatgagaaa
aaacctaaacCATGGATtacagattgaaacaaatatatgaagggtggaaT
TTTTCAGCCGTCCaacgtgcaaggcactgaagggccatgggtgccaaaaa
gaagagGGCCGTTTGATTCATTGGtcgaaatttgataaacagctgcaaag
gagcgctgggaagcaatctgttgaagagaccacttttgtttttgttgcag
atttctatgaaaacttctctcagggattacttgtcaatgtacgtACACAT
GTGGTGTGtaaacttgtcagcattgtactgtcaactgctctaacttggga
ctatctgacaaaacatgggacggcaattcggccaccatttcaccgaacct
ccaaagtcatttaatttgagttaaggaacggcgtatttaaaaatacacga
tttctctttcgattttacagtaagtgaaaatacagaccagaccagatatg
caacagtcccatgtttcgaccaatcgtccgataagttagagcagttgacg
gtatgttgtaaaggaaaagataaaagaggtaagacgtagcttcagccagg
tttctagcagttagtcacactaggaaattaagctttcagaaaaaacaacc
tcagtcatctacaggatacatttcaacaacaaggatgagagttacctgaa
tcaagttcgcaagacaatatcaattaaaacttgaaagttggaaacaaaNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
TGTTTATACGCTAaattaaaaacaattccgcacatgtaaatgggtcattg
tttgaggtccggcaaaatttccgggagatagcctatccggcggtgcgcaN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNattattgaaagtttgtctcggcctttttataatgagcg
agacatacgttctctgattacgcaattttcatattgacattttcgaggca
ttttgatgtaactggtaagcgatatagcgttttcgcagcattaatctttg
atactcaTTTTGGCGGGatggacgctagtgtgactaactgtctagctccc
cccaacaaagtaaagtccccccaacaatttagcttccccaaaaaaattgc
cttgtgctaggtcccctaacacttggggaaaaaacaaaaacattttcctc
CCGCCCCCGTAGaaagaagtcaataaaaaatatatgcgagtacggtactg
ataaatgaaaacttaaattttacttgtatattaatatttatgttaaccaa
tcttttgctttttatattcgATTTAATAGTATGATAAGCCATCTTTTAGa
attagctgaacagccccagagtctcagtcagatTATCTAGGTTTccccca
acaatctaggtccccccaaatattttggtaattttagcccccaggctctt
taaaggccaaaatatttcttagccccccccccaaagtaAGGGGGCTGAAG
CTATGTAAGATTAGCCTAGTTTATAATCccgatataggagtttaagttta
gactgtctATGCTATATCATCTAAAAGAACCTAAAAGAAAACTTCAtgga
tgaaaaaataatttgtttttgaCTTTCCCCGGCGCACAACTAGATTCTCG
TTGTAAAATTTCCTACAGGAGGACATTTTTTCTtagatggttaattttca
agggcCTTTCAGAGGTTTACCTCTCGTAAAAAAATTCAGCGATTAAACAC
ggctttataaaaaaatgcgcAAGAGAATCCCTTTGAGGTATTTTGAAGCT
AAAAGCCTAAGAGCACGTTCTAAAAGAAGCAGAAAACACACACTTGGTAC
TTACTGCTTACATGAAACAGTTTGAACAGAAAGTGTTTCTATTCCATGCA
GTAGCCAGGTAGCAGAGTCTGAgctaatgaaatgaaatttcacTTGAAAC
ATTTGCTCACATTTCAGCC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_16 | supercontig | scaffold_16:98557..109675 + |
Orthologs
The following orthologs are found for this feature:
| Ortholog Name | Description | Organism |
|---|
| POLR2C | DNA-directed RNA polymerase II subunit RPB3 | Homo Sapiens |
|
