XLOC_031860 (gene) - C. hemisphaerica

Overview
NameXLOC_031860
Unique NameXLOC_031860
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_169:415623..419444+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_031860 ID=XLOC_031860|Name=XLOC_031860|organism=Clytia hemisphaerica|type=gene|length=3822bp|location=Sequence derived from alignment at scaffold_169:415623..419444+ (Clytia hemisphaerica)
taatccacgcgaaatctttaaattctcgtctcgcgaaaatttatccacgt
aAGAGGAGCTACTACCAATAATTAGGGTTAAGGTAGTTAGTAATTTTAAA
AAACCCAGGGgtgtactacccttgtcgaccgacgggggtgctccgctgag
gttcgaaaaatggaccctacgtgggactcgaaatttgcgaaaaaagtgac
cctgaatgggactgaaattccaaaattttctacttttcccccaaattttc
caaaaaaagacaccctacgagggactaatttttctattttggtgtttttg
cgaccctacctgggactcgtggaggttagaaaaggtaccctgaccagcgg
agcatccccgtaacccatcttgccctagtaccccccggtttaaaaaatta
caattacacCTTAAAATTGAATCTTTGTTAAAGGACCCTTATATTCATCT
GATTAAAAGAGGGAAAGTTTGGGGGATCAAGTCAAagtaaaacaagcaac
atgctgaatggacctaccttgaTCAATATCAGATAAAAGTAGGTATTCTA
CATattttactattggtattgagcaaacacaataagttttagaacaatgc
aaaaacgtctgatttattttcttttatcattgtgtaacttggtcgtcttt
ttttgaaaattttatgacaaaaaaaattttccttagaagaattacttcag
ccacattttaaggtgcctagcactctatctttctgacaaaaatcaggaaa
aactaataaaGCAATTtcgcaccaagtccaaaaaaccttatttttaggta
gtttttggcccaaatttaccccaaatttttttttcaaaatcgggctccgt
cacttataggcattgctattttgtaNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNaaaaaattaa
aaaaaactaatgagccaatcccgagaaaagcttgtaacagacgaacggac
aacggtcaaattaaaggacctcccggtaggtccaaaaatcaaatgagaGA
GGCGATTTttctatttacaaaattttgattttctttttttacttctAAGT
CAATGTatatacaaaaaattaattttagggTGTTAGTTACCATTGATGTA
ATCCATAAAATCCCGTCAACTTGACACATCACTTGCCTGTTACTGAAATT
ACAAGAATAAATTTATAGTAACCATGAAAAGCTTGTATTTTGGGACAAAG
GAGGGATTTAGAAAAAAACTATGTATTACTTAAGTTTCTATCCattgaaa
atttctcatttGCCATcagcttaaaaatcaaaacacagtACAAAATGCTC
ATCAAGATTAAGAAAATGGGCAGAGGATAGGGTAATGTTGAAAGGTTAAG
TAAAAGGAATCTGTCTTTCAAAATTCCTTGAACTTAAAACCCTTTCATGA
AAAGTTACCACCTTTAAGGAAATGCTGTAGTGAGCAACTATTTGCTGCAA
GCTTTCCCCAATATGCGATCCTTAAGAAGAAACaaagtttttaattaaaa
atgatGCTGGTTTAAAATGTACTACAGCTGGCCCTAAAAACTTTCAAAGG
TTTGtaattttgcttgaaaagagACAGTAGATAAGATTTATGATTCACGT
ACAAAAGTTCTGAAAACAccataaaaactattttaaagGAAGCACGTTAA
ATACTAACCGATTCTCAAACTTTCTGAAACATTGATGTCTCATGTTCGAG
CAGTAGTGGCTTCCTGAAACAAAAAACAGAAGTTTTAGTAAAGCTATAAA
GAGAACTATTTACAACatatatacaaaaacaaacatctattGATTAATTT
CCAGTCTATCATTGATTCTTGTTGCAagtggagcaaaattcaagggAGAC
TTTATTGTTAGAAACATGAAGACAGACACCACCATTGTAATCAACTGCAT
CTTCATCATCGTCATGTGTGGGCATCCTTTTGCCTGGGAGCAGCCTCTCG
TAAAGTTTTGGACCTGGAGGTGTTTTTGCTCCTATTGAAACTCCTGGTAC
TGTAGAGACAGCTTTTAAAACTGAAGAGAGCATGGTCTGATTACGAATAA
CACTCATCAAATAAGCCACTTCATCTTCTAGAGTTTTGATCTTTTTCTCT
TGTTTGGTAGTTTTCAATGAGAGTTTGTTATTTTGGCTCCTAAGAGTTTT
GACTTCAGTTTCGAGGTTGGATAGGTGCTTCTTCTTTCTTTGCCTATTCA
ATCGTGCCATTTCAGCATTTTTCCTACTCCTATCAACAACAATTACTTTA
CCATTTTCATCCTTGTAAGAAAAGGTTTCATCATCACATTTAAGTACATC
AATATTATGGTCACTTTTAGAgtcaatttttgaagatttggaCAGGATCT
CAGCAGGCTCACAGTCACtaagatttctttttcttgtCACTACTGGCTTA
GCAATGCTTTGACGAGAAACTGGCTCGTTATTTACAACAGCATTATCAGG
AAGTTCATCTACATTTATCTCATCAGTATCAGACACAATTACAACTGGTT
CAATTGTTTGGTCTGGTAAAGAATAAGGATGATCATGAATATTGGAACTT
ACACTATCAGATCGACTGAAATCTTTGATGTTGGTAAATTCAACATCATT
TATGACTGGTGGCAAAACGTCATCCAACAATGTTTCAAGCGAGAAGTTTT
GACCACTAAATCCACTGTCATCGCTGTAAGCTGGTGAACTATACAAATCA
TTATCGTAGCCAAGGCCCTCGTAACATAATAATTCATCCTGGTCACAAAA
TATATCTTTAACATCCATTTTACAATCAGTTCTTAAAGATTTCCAAATTA
CGAAAACGAACACTTCCAACGTCCAAAGTCTTGGCGGGTGGAATGAATGA
AATTACATGAACTGAACGAAAGAGAAAGACAAAATCGTCGCGAAAACGTT
TTTGACAAATAATTATTATACAGACCATCTTATTAATtctaaagtttgaa
attttgaagcaaaCTAAATCGA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00050322TCONS_00050322Clytia hemisphaericatranscript
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_169supercontigscaffold_169:415623..419444 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.11	1.64	2.1	1.94	7.69	4.59	7.5	9.82	11.06	17.77	9.75	13.62	10.85	10.2	10.18	7.99	3.78	3.68	8.22	9.1	10.95	14.21	4.17	4.23	1.41	3.75	12.24	16.41	22.34	19.79