XLOC_032178 (gene) - C. hemisphaerica

Overview
NameXLOC_032178
Unique NameXLOC_032178
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_189:59643..64038+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_032178 ID=XLOC_032178|Name=XLOC_032178|organism=Clytia hemisphaerica|type=gene|length=4396bp|location=Sequence derived from alignment at scaffold_189:59643..64038+ (Clytia hemisphaerica)
CGTAAAGTCTTCCTTGATATCAACAACCACTGGAGGCGGGTTGACAAAGC
TGCTGTCAAAGAAACAACAGGCCTATATTGTCAATTCAGAGATTTCCGAT
TATTTCATGCGATTTGCGAAAAACGACGAGAACAGTAACGGTAATTTTTT
CACATTACTTACATTACTCTTTCTAAAATTCTCTTCACATAGTTACATAT
CACTTTTTTAGCTCCCTTTAGATTTGATGATATCTGAATTTTACAAACCT
GATtctaaaagatttaaaaagGAGGCTAAAGGTGTTTATCTTTATGTATC
TAATTCACAGGCGAAATCGAAAATTTGTGCAAGCTCTATAGTGGCGAGTC
AATAACAATAAATTACGCCACCGAAGATCAATGAAGTATCAAAAGTGACA
TACCATTTTGCATTTTGGGTAATTACTTgttacattttaaattttatacg
AACGTCCGAACTAttagtttttgtatttttcctaTAATGTAATCTCAACA
TCGTTTTTATCCCTTATATTTGGTTTCTCCTTCTCCATTTTTTGTGCAAT
TTATAGGTGCCTAATTCAAAATTTCACTCTGACCTTTTCCACCCATAATC
AAAATGCTTTCACTGTTTATAATCACAACAGGGAAAAACTGTGAGCNTCA
CTTTGACTATTTCCACCCAAAATGCTTTCACTGTTTAGAATCACAACAGG
GCAAAACTGTGAGTAATTAACAATGAAACATTAATTTTATACCATAGTGG
GGAATGCCGATTACTTCATATATAAATAAAGTCTTCTCTATTTCAGGGTC
TACGCAGTTAAAGAATGCATCCATGATGTTGGCTACAATTGACCGTAGCG
ATGGGTTCTGGGATAGGTTTTTATTCAGCGTTCCACCTCCGTTCAGACCA
TGTCCTGATGATCAATTAAAAGCGACCCAAACATTCAATCAAGAATTTCC
ATTCACGATGAAAGATATATATGAAAAACTGGACAGTTTACTTGACNCCC
AAACATTCAATCAAGAATTTCCATACACAATGAAAGATATATATGAAAAA
CTGGACAGTTTACTTGACGAAGAAAATCCCCCGATGTTTTATTTGGCACA
TAATGCTGCAGAGTAAGTTCGGTTTCATATATTTTAACTATCAACCATAT
CTGTTTTTCTATAGCGTTTTGAAGCTTTAAGTACGGACTTTATTTTTAAA
AGGGGAAATTTTCTTTCTGAATTAAGCTTGTGGACCATCTCAAGTCAAAA
CCCCCAAAAATCgcctaactttttcaaaagaacttttttgactttaacaa
aggataaataaatgaggttaacttatttttatttgNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNATACATTATAGAGGTTAAGTGTTGAATTTAAAGAGATATTC
TTGGTCAAAGTAGGGTTAAAAATTTGAGGTTAACTTGCACTGAGGTTAAC
CTAATGATCCTTAAAGATGGACCAAAATTAGTATGAAATGTGAGGTTAAA
GTAAAAATAAGTGATTGGGTTTTACTATTTAATGATTGGGCAACAAGGTA
GGCTAGAAAAATGAGGTTAATATTTCAagtagggtgtaaaatttgaggtt
ATTTCACAAAAACACCCTAATTGTAAGGTTAACAATGATATTTCAGTCTA
ATTTTGGATATCAGACAAACAGTAGCCTATTATCAAAAACAACTaaacat
gaaaaattatattttggtatAAAAAGTGAGGTTAACTGGTATATTAACTT
GAGAGACACAAGTACCTGAGAAAGGGGTTGATTTTAGGCTTTCAGATAAC
CTACATAGAAAGGGAAAATTGTGTGATAAAAATAGTGGGATTCATTATTC
AATGGTTGAGGAACAAGGTAAGGTAGAAAAAATGAGGTTAATATCTTAGT
TTGGGTACCAAAAGTGATGTTATTTGTGAATTGAGCTTATAgggtttttt
aattctttgttgTATACTTTAATGACTTATAAATCCGTTTTTGATATCAA
TACTGAGCTTAAAAGTAAAGCTTAAGTCTTAATTAAGTCTGAATTAAAAA
TCTTTGAGGTTAACTTTTTATCGTAGTATACCTTAAACGTTTTTCGTTCA
GTTGTTTAAGTTTGAAGGTATATAAGCTAAAACATCCTACTTTTTCAGGT
TGTTTAACCTCATTTTAAGAACCTTTTTGgtctatttcatatttttttag
cTTACAAGttactttatgaaaacttttaaaaagtaattttgttcATGTAG
CTTTAATAGAATAGAACTATTTAGATCAATTAGAGAAGCAAATTTCTCAC
ATTCCTTAACATAGAGTTCTAATTTTAACCTCAATTTTTAACCCTACGTT
AGAGCAAAGATTGTCAATTTCTTAAAAACCCTTTTGATCTCAGCTTCTAG
TATCATTTTACTTTTGTCCCATAACTTAATACACTGGCTAGCAGAAGATA
TGGTTAAGAATGTGAGGTTACTTGTTACCATTTTTTTAACCTCATGAATT
GAACCTTTCTTGTGGGAAATCTCTAACCTTTTTCAAACAAGCTTGATATT
TGAAGCCTTTTTGATGACTCCCTAATAATTTTTTCCCCAATAGTTCAATA
AGCATCTCTATATTTTGAGGTTAACAAAAGTCTATAAATTGTCATTATTA
ACCTCAAATAACAaacctttttcaagtttttttttcatttttgggtaTAA
GCCATCAATTATGACCAAccctcaaaatttcaacctttttagataaaaaa
tgaagattatatGGCCAATAATgtaaattttccactttttcctcaaaaaa
attaactttttcttaggCGACATTGATTTGAGATTGTCcttgttttaaaa
ttatagTGCGTCTTCCAGTacaaattgagaattttttaaatgtaaattca
aattttttggaaccTACTTTACCTTAACCTAAACCTTCTTTACCTACATT
TAAATATCTAATTTTAATTTGAATATTACTGCCATGTCCTTTATATGCGA
GTGATTGAAATACTCGGAATAATACACAAAGGTATCTAACCTCTTTGACC
TACGTTTACAATTTGAGAATAATTGCaatatcattttgaaaatataataa
cAACACAAACTCTTTTCCGTGCGTATGCAAATCACGAACCTTCGAAACCT
TCATTACCtacatttaaaataaaattacgTCACAATTACTTTTTCTTCCA
ACAGGTATGTCAAAAAGATGAATACAGATGTAATATTAGGAGCCAACAGA
AAAATGAGAACAGCAATTCcagtgaaaaattcaaaatttactgaCCAGAT
TCCGAAAATTGCCGTTGCGCTGCAAGTTTTGGATACATTATTCTCTATCA
TGGATAACAACAATCAAACATTGACAGAGGAAATAACTCTTGACAAAATC
ATCCATGCAAGGAATATAATCCACCATATAGCTGATCAAACATCAGTTCT
CAAAGAGGTACAATTTTGATATTGACTTATTATGGCATTAATTCTAACCT
TGAAATCAAAGGTTCGAAGTACCTAGTCACTTTCCAAGTGCTAATGTCAT
ACATGATTTGTTTTGACCCTGGTTTGGCGCGAATTAAACACTGATAACTA
ATATAAttaataaaatcaatcaatcaattgcTTTATAAAACCACGGATGA
GGGTTGCTTAGAAATTAGTTTTATTGGAAGAGACTGTACCTTCTTTTTCA
TATTATTATCAATGATTGTTTTCTTTTATTAATTTCAGTTCGTGAAATCT
TCAATTCCAATCCGACAAATCGGCAATAGTTTTGTTCCAACCAAGGAAAA
TCTTTGCAGAGTGATTCTGGCTTCTCCGGGTCCAATCGTTACCCAAAGGT
CAGTACGAATCTGCACCACCAAAACTATCCGCCAACATATAATGACGGCT
GAATTCATTAATTGCTGCAAGTATTTGATGTCGGAGGGTTATGGAACGTA
TTCCAGTATAAAAAATGGCCACCGATATTCGtacattttcctcaaaaagt
CGCCTGAAATGATCAACAACTTTTCATTGATTGAACAAGAGTTATATGTG
AGAAAATTCGAGCAAAAGATAAATGACAGTATCAACAATGTAATTATTGA
ACATTGTTCTACTTTAATCtaataataatttgattgaaatattgcagCAA
TGGCCGTATACTGAGTAATGTGGGAGTTCTTTCTTTTAAATACTTTTGGA
CCAATTCTTTTGACATTTTGTAATTTGTGTTTCCAACCAAATGCAC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00050797TCONS_00050797Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00050797-proteinTCONS_00050797-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_189supercontigscaffold_189:59643..64038 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.05	0.18	0.04	0.04	1.73	0.94	2.94	2.58	3.06	1.96	2.52	2.83	1.62	1.98	0.52	1.24	0.97	0.58	1.13	0.52	0.39	0.48	0.34	0.44	2.73	3.02	0.35	0.38	0.45	0