XLOC_032241 (gene) - C. hemisphaerica

Overview
NameXLOC_032241
Unique NameXLOC_032241
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_19:156526..164922+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_032241 ID=XLOC_032241|Name=XLOC_032241|organism=Clytia hemisphaerica|type=gene|length=8397bp|location=Sequence derived from alignment at scaffold_19:156526..164922+ (Clytia hemisphaerica)
AAGCATTTCCAGGTATTTCACATAGAAATGAGAGGTATTTCATTgttata aacttcatttttttctcacttttcgCTTGTATATAATATTTGCTGTACTA ACTGTATTGTATAAGGGCTGTGAAGCAATCCAGACACCACCTGTACCTCA ATTTGCAAGTTGCTAGTATAAAAATCCCAAGCTTAGCTAAATGACTGTCT GTGTCATGTACAAACAACTAAACAAACATTTAAAAccaaacaatttgaaa aatttgcaccatttttttttaatcaaaatgtcAGACGTGCAACaaactgt aaatttttttgacttggcATAAAAAATATTGCCCTAGCAGTCAGGAGTTC TATCCTaattaagcatatttttttcgatcgcacggactttcttaattagg attatccctttgtttttcaatcctaattaagaatatgatttttaactcaa tttatgtttggatttctagaaagcttacccattcattgtcaacatatttt ttatttgaaagtaatctcttcatggaataaaaagatatagtcaaatcttg tagttgtagggtcatttttcaaaatatttttgccaaaatcgattttcgca tttcgccattttaccctacgcaaacacACGTGCTTTGTTTCACATTGGGC GCGCGagtcagtctaaacttaaactcctatatcaggattataagctaggc tagtcttacctcttttatcttttcctttacaacaatacaatgctaacaag ttgacacaacacatgtctacatgtacattgacaagtaatctctgagagaa gtttttatagaaatctgcaacaaaaacgaaagtggtctcttctactgatt gcttcccagcgctccttcgcagctgtttatcaaatttccatcaatgaggt tgccgcatttcaaatGGCCGCTTCTTTTTGGAACCcatggcctttcagtg ccttgcacgacgggtggctgtaaaatcccacccttcatatatttttttca atccatgatccgtggcttaggtttttttctcatcttcaatttactgaaga aagcgggaatttgatgcaagagttagattgtcaacaaatcAAAGTGcagt aaaaaatcattgaataaaagaagaacttaaaatcttaaatattttcattt tgaagaatagatgcaaaaaagtgaaacatagaaaagtttcatttttcatt gcattaatcgaaatgggggatttggaaaattttctatgtttagttttttg cacaaacccctgtaactatgggcgagcaccccattgctaagatgttggct tgaaatcaaaaatgaaaccactcaaaacgaaaataaaattggcccgtact cgaaatcccgtaatcttgatatacaagtttaagtctatactggcGAGTGG CGATGATACAAAGTGTGTGAATGAAATCAGTTGCGTGAAGGCTTCGGGAG ACAATGCGTACGCGGAGACGATAGAGCGTCACAAATTCATGCCGTTCAGA GCCATTGGTGAGTCATGTAttgatgtttttcataattggactgaaaaaaa tagaaataatgaaaatttttagaataatgaaattttttacgCGGAAGCTC AAACACACGCGGACAGGTAACGGTAAACTAATACCTGACTTCCCTCACCT AATAAGAAAATAGATTCACtattagctttccaaaaatttataaCTTTTGT TCAGGTGATGTCTCATTAAAAAGTTATTACCATTCTCATAAAAGGtccat ttttgaagaaatgCATGCATCCTACAGTGCGGGTTTATTTCACGGAATGA AAGCGGAGTCTAAGGGTTTGTAAAAATTGTTAAGGTCATAGCATTTGTCA ATATTGACATTTTAAAATGATGCTTTCGCTACTGAAAATACGGAGATGCA GAATgggttaaagttctatttctaTTCTTTAATTGacataaactttacaa aaagcTATTCTCGGCAAAGTATGTTGGGTTGCCCATTTTTTCTCGGAGAA CAtacatagtttctaccccccctacatttaggggggggtcttgggttttg atgaaccaaaagcaagggaggggtgttaaaagtatgaAATAGNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNggtgtgaaattttaaatgaatttcctaag ggggggttagcacttaaggggggtcctcttacctaagggggggggtcttg acccctctagaaactatggaCATATTTTCTCCAATCCAATCTACACAATT GTTACAAATTTTAGGCTGGatattttttagaattattttataaacagaca gttaaaaaaatatattaaggcgaaaatataaaaatgtagtgtttccggaa tgcgggtgaaggaaaaaagctctcatgcagccggccggaaaaaacttttt ttttgcttttcttgataacttaagatcattaaaatagaactttaaaaata acttttatgtacaaaaagtataaagtaagccctgaatactaatgtatcaa ctattagcaaacaaaacttgatttacaagctggaatatctaaccaaacga cgtttgatagcttgaacggtcaaccTGATTTTCTTTATGACTAACCATAT AAATGAACCCATAGTTTGCAGCTGGgtcagaaaaaagtttttcttcacCC AGCTGGTTtctggaaacactacatttttttattttcgactAATAGTCAAT ATACAATAAAGTACAAGGATGAGTAGCAAAAGACCAGAGCTTAAGGCTCC CCCAGAGGTGGTAAGCAAATTTGTTCATTATGTGCCAAGCTTCTAATTTT ATGCCAATGTTATGGGCCACATTTACACTCATTGTTTCAAAAAGAAGCAC ACACTGTAAAGTTGtttttaaaatctaatacatcaatttctatttctatt tctttattagCATGAAACTTTTTAGTTTTATTTCGCTAAtggaacaaaaa aaataaataaatgaaaaaatattattaagtaATTTAAAGACTATAAAACA ACTATATCAAGAAATTTCTAATCAGTTtgctcttgatgaatttttttagt TCTACAATGATGTCGAAGCAAGGAAATATACATCAAAGTAGGTTTCAAAC TTTTTACAAAGATTTGATTAAACTTTTTGAGATCAATTCTCAATGTGTTG TTTTTTCATTAACAATAAAAGAGTTggtttttgtataaaagttCATAAAT TTTAAGCCTAACTCGCACTTTTGTTATAATTCTGTATGCATAGATTTTTa aacagaaaattttaaatattatattattatatgaaatatcttttgaatac AAGCTAGTTTTGAAATGCTTTTGAGGAATTGCTATaatattttcaatgat tttttaactTCAGTActcgaatgattgaaattcaaaatcagATGACTTTG AGAGCCTTGGAATTGTTGGCCCTACCAGAAGATGAACCTTGCTTCCTTTT GGATATTGGGTTTGTACtagttacacgcttttttttaataagaaacctTC ACTTGGCTCCAAGCCTGGAGTACCTTATtttccagagaatttcagcATCA AAGATCCTTATCAAGTTCCTtctttacatagctgctaacaTTGGATTTAC TAAGTATGTAGCATATGTATAAGTATAACAATGGACTAAAATACatcatt aactttttttcttgttctcAGCCtgggcagttccttaacaaCCCCTTAGT TTTCGAACTATTtgcagcctcaagttccttataaacataTTCCTCATAAA AAAATGNGTTAGTTTTCAAACTATTtgcagcctcaagttccttataaaca tattcctcataaaaaaatgtgtgaTTGATTTTATAAGGGTTGAACTATGA TCATTATAAAATAAAGTTGGATATCACATGAAGTACTCTAAATCAGCTTT TTAAAGCtgcaaagaaatttttttcctacaCATTTCTTGttcaaatcttt ctttattttcagtCACACAGCATCCAGTTTATCTGTTTTTGATTAAATTA ATGAacatgattttattatttttcaggtGTGGGTCAGGGTTGAGTGGTGA GGTATTGACAGAGCAAGGACATTATTGGGTTGGATTTGATATCAGTAGTT CCATGTTGGGTATATTATTTTCACTCTTATCTTTCATGTATTTACACATT CATTAGCTTTGTTTAGTCCCTTTAATAATGTGTCTATATAAAGCATATTA ATTTAAACCTTGAATAAATTTATAATAGAaaacaagaattttcaaaaaag attacTCATCCTAATTTGTAGATATTGCAAAGGAAAGAGAAGTTGAAGGT GATTTATTGGAACTGGATGCTGGTATGGGAGTACCTTTCCGGCCAGGAAC ATTTGATGGTTGCATCAGGTTTTTTATTGTCTTATCTCTTTGTACTAGGG TGCAACTCCTCTCTTCAAAGTAAATTTTCTGGTGATCCTTGAATTTTTAA GAGATGGATCCTTTGCAATGGCAAAAATCTTGGAAACCCACTCTCACAGC ATTTGAAAAATAAGTATTgtgaaaacaaaattaaattcatgCTTGATGCA GAGGGGAGATTTTCTACATATGAAGCTTTAAAGTGAGCTCGATTGATTAA ACAACATTTTCTTCCGTTTTCAGTATTTCAGCCCTTCAGTGGCTTTGTAA TGTTGACAAAAAATGGCATAATCCTGTAAAGAGATTACACTCATTTTTCA CTACATTATACACAAGTCTTGTAAGTtatattgttttcaaattttttatc ataataCTACATTATGAAGATAAACTAACTTTCTCTCCTATTGCAAGTAG AATAACGAAAGCATTCAGTGAGGaccttttttaaacatttgtttcccagg catagccttcctggaaattattatctttttggaaacagatatctgtttcc caattcaTTATGTCATCTCCTAAAAATATTGacctgtttctctctgatga catcatcagctggagcggggaaacagatagttttaaaggaaaaagtTTTT CCTAGAAAAACGAATCAACAAAAAggtctctcctggaaaagggaaacaga tattttggGGAAATGGGCTTGTTGGCTGCTTCTGGAATAAGTTATTATCT GGTTATATTCTTCTTATCAACTCaactttattttatattataagtCTTCT TTTTGCTTTTAAGAAAAGAGGAGGCAAAGCCATTTTTCAGTTCTATCCAG ACAGTCCCAGTCAGGTAATATAATATTAAAATatataccaaaaaaataat gGTATAGCCAATTACAATTCTAAAGAGAATTGCTAAAAATGTCATAACAT TCattttgacatttcaaaataataacattTCCTATCAGCGTTTGTTACAT TGCTTTGCCACATTTGTTTTAATTCTACTTTTATTCTAAACTGCACGTGA TCCCTAATTCTACTCTTACTCTTAGGTAGAACTAATAACATCACAAGCAA TGCGTTCTGGTTTTTCTGGCGGTGTTGTTGTTGATTATCCCAACAGTACA agagcaaaaaagtaaataattcTTTATCAGAATACTCTAaggttcttttt tataagagcaaagtctttaatttttataaatatttatgATTGCTCTTTAC TTCTTGTTGAGTTGAGTTAAACTCTCATTCATCAGAAGAGTGCTTGACCA ATCGGAATCCGAAGCATATATATACTATTGTCGAATGAAGTTAATGTGTT TTATTTCTAATTTATTGAATGTTTGTTAATGATTGTTCTTTATAAATCAA TATAGAGagtactagacggttcccgtcgtcgccaacgccggttaacggtt ttgcttgcacatcaaaagcctttaaaatacgataatgtgggttaattcct gacatcgttttggcttaaaatgccgaatacaaTAATAAAAATTATACTTC TAAACTTTCTACATTAGTCAAAAttttcccgtttgttggcttcacatgag gacagcttaagaccggcgcatatgcaatgcaaccaacattgaaacctttt taaataatgttacacaaagtttaatcatcaaacaacaatgttggattttg ttgcgtgtgttgatataaaataattcgaaatcgtgcaacaaaaatgccac acctgacgtcgcagtactttttcatgaaattgatgtcagaacttttttcg tttacaaatagcagtgtagagtcttctctaatccgagttttctacgcttg tcaaacttagcgcgagactttttgtatcgaaggtggataggttttccagc cgcgacgttcaaattttagaaaccttaacatatgttactgggctagcgtt acagacatttttcataaactcatttagtatagtaagattaTTTCTGTCAA AGTAAAGCTTACCACTAGACCTAAATTTCCTTCAGTCTGATGATTGCCCT CACTAAGTGAATAATTTCTGAATGATTTGCGTTcaacttttaattctttt ttaatagTACTTTTACCTATGTGAGATGATGACAGTTTTTGTCTTCCTTT TATTCCTTAGAATGTTTCTGGTTTTGTTTGCCGGAGTCAGTAATGCTGTC TTACCTCAGGTATGCAATTATGCTTTTGtttatcaaacatttttttactG GCTGCTTGATAATGGGCTGTAACTATGAgttaaattcaaaacattttaat aATTTCTTGCCGTTCTTGcatattgattattttttgtgtttaGGCCTTGG GAACAGAAGGAGCTGGAAATACTGTATCTTATACAACAAATAGGTATGTA AGTCTTTCTatgatattttaaaatttattgtttttagaATATCGCCAAGT TTTGTACTAGGTATGTACCAATGTTCTACTTCTTTTATTTAGAGAGAGAA ATAATAACAGAAATGGTAGAGGGAAACCAtcaaagaaaagtaaagaatgg attcaaaagaagaaagatcGGAAACGTAGACAAGGGAAAGAGTAAGAGAT CACACTTTATTTGCTTATTGCTTTTTACCACACTCCCTTNAAAAGAGTAA GAGATCACACTCTATTTGCTTATTGCTTTTTACCACACTCCCTTGAACCA TTTGCTAGTCTTTTGATAAGATGATATTCCTTGCATTGTGACCAGAAATA TCTGTCAATTGGAGATTTCTACCTTTAAGGTCCTGCCCTGTATTTATTAT TGAATTCAGAATGAAGAAataatattcttaaaattttccatttcagTGTT CGAGCTGATTCTAAGTATTCTggaagaaaaaggaaagttgCTTTTTGAGA TTGGCTTACTTACAGTTGTCATATTGGGGCTTTGATCAACTGGTTTGAGT GGTGTATAGTTTCCAATCGATTGAGTTGGTGATGTGGTAGAAATGCTCAG TGTGTACCTTTACACAATACCAACAATACTTATCAATAAATTCTTTGATA ATTTAGGATTTCATTAGATTTggcaaaaactgattttttactaaaaatga aatttcttacCATCATTATTTTATTGGAAActctatttttattcaaaatt ttgtttttatacaatGCCAAAGAAATTCATATCATCTTATACAAGATAAT AtacaatttttgtaaacatgaCCAACACCTTGTGGGTGTATTTTGGTTTG TTCTGCTATTATAAGCCATGAAATTATCAAACATGTTCATTAATATCATC ATAATATCACTAGCATAATAAACACTTTGTGGAGTAGAACAAggatagaa aattttttttcatagagtCTAGAGGTGCTGATGGATTCTCCTTGGAAGAC TGAAAATTTCTCCCTTTCAATTTCGACTGAAAATTCCTTTTTGTGTACAG ATAGTTTAACAAATTTCCATGACAACACATCACCAGGTGTTGTACTTACC TGGTACAATAGTTTCTCttgaattttgtatttttttgagaGGAAAAGATC TTTATAATACTGTTTATTGTGTCTCTCTCTGGCTCTACAAATATTCCAAT TTTTATTAAGATTGTCGTCTGTAGCTTGAAACCTGCCATTAGAGTTT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00050873TCONS_00050873Clytia hemisphaericatranscript
TCONS_00050874TCONS_00050874Clytia hemisphaericatranscript
TCONS_00050875TCONS_00050875Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00050874-proteinTCONS_00050874-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_19supercontigscaffold_19:156526..164922 +
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
WBSCR22probable 18S rRNA (guanine-N(7))-methyltransferase isoform 1 Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
113.63 114.1 56.92 44.97 55.1 45.41 54.28 56.16 51.64 54.24 49.6 43.59 67.1 80.52 62.24 62.58 67.24 73.07 43.36 40.74 58.86 58.97 69.69 68.77 41.02 48.3 50.27 62.65 47.77 46.02