XLOC_032257 (gene) - C. hemisphaerica

Overview
NameXLOC_032257
Unique NameXLOC_032257
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_19:754837..762267+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_032257 ID=XLOC_032257|Name=XLOC_032257|organism=Clytia hemisphaerica|type=gene|length=7431bp|location=Sequence derived from alignment at scaffold_19:754837..762267+ (Clytia hemisphaerica)
ttttctttcaaactttTGTCAAGTTGGTGGTTGGAAGGAGGCGGCCGACc
taatttcgcgaaattaatcATATGCCCACGTATTTACGCCATTTTATTTC
TATACTATTTatccattttgaaaataatttgagcaaattatttttttcga
gcTGAAGAAAGGTTGAAATCACCGCATTATGGATTGGATCGTTGTGTTAG
AAAGGTGAGCGACTAATTCATACTCATACTCATCACTTAAAATTTCTTAT
AGATATGAATtaaacacacccctgtctcgagTACCTGTTTAGAATACTTT
CACACCgggaaaagattttaaaaagtttcacAGTGGTGATTACaggatac
actttttttttttattagaacctagtttataagaacatataggctgaaat
tcgtcgaaaaattaagaacatcttaagaacatgcccagcctcagtttgga
aaNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNaaaaaaaaaaacgtgtacacctTCTTATAAGAAGGTCAGAAATTTT
GGAAGACTTGAGATGTTCTTCAGCTTTTTGGGCTTAAAACCTAAAAATCT
TCTCAATGGTcatattttcaacatttcttGATTATTTTGGCGAAATTTCC
AAACAATTTAAATTAGggttagagtctgcaaagcaaagccttgaaatatt
aaacttttttgcctcgaagccttatgttcttataaaaaaagctcaCTCGA
ATTAAAGACGTGATtgtgtttaaccctttaagcatagaggtataaagaaa
acaggagttgaatgtgtcggtaattggtcgttaaagtcttttgatttctt
ttataaaatgtatcaaaagaaattctaagctcgcccgNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNat
atatgagattatgagcatgcatacatcgtaacttttttaatcgtagggcg
agcttggttacaatagcatacttctcctgtctttctttatacctccatgc
tttAAGTGTCAATGTcatatatatcagacatgggctatgtaggcctgtaa
tgcccagtttgagttagaaatcgtaatttttggtataactcgtaggaatt
gaattgggcttcatggccaagcgaaaaaaaatcaaaagtgagttttttca
gcgagattttaatataagctaaaaagtcaaaaaaatgctaaaatttgaca
aaaatccacatttttaagattttgaccagttttgactatttttggtcaac
gagtgacccaagaacctccaaatttggccctgatttACTTcattctgtcc
tccagcgaaataatttgaagttttaccactgggcacatttctatcattca
ggcaggttcGCGCAGCGGACATGACTCTAATCTATCCAAcggactataaa
cgagcttctaactccttctagatctgatctggagatataagcctttaaag
tttgaactagcgattttctttgaaaaacttagaaaaaaatgaccgtggca
cttttAGGGTTAAATATTCttacgcttttttataagaacgtccaaaatat
tttaggctACGGATGTTCTTAAACCTTTTGCGTCGAATTGAGTTTTACTC
ACCCATTTTAAGAGTGTTTTATTCGATTTCCAAAGAAACTGATTTGTTTT
AGAGcctccaaagccttaaaatgttcttaaattaaGGCCTAGTGTTTTCA
GTTATAAACCATGGCGCGGAAGCTTGCGtctgtaaaatttgcaaaaacct
GCTCCATTGAAGAGGGCGGGTAGGGCCAATCCCGGTGGCTATGGGGGTAC
TATATGTATTGTCGTCATTTTTCTAGCAAAGGGCCCATCGGGTGTAATTT
GAATGGACAATGAAACAGCCTTTAGAATTTAGAAATCAACGGTGCCTTTT
TTCGGCGTTCCGATTCAcggagaaaaaaaacatcataaacgaaaaaaaaa
tttagcatattgaaatttatgttttaaaatcaaAGTGCAAATTATATAAA
TTTTCATCAACTTCTATTACCTAGCATGTAGTTGTGAAAAGAAAACATca
cataaaataaaaattagaaaacacAAACAAGAATTTCTGTTGTTAAAAGT
TCAAATGTGAGGGAGGGTTCAAGATGTTTGGAAGTCTTTTAGCAGTGTTT
GGTAAGCAAAGTAACACTTCTCCGTAGGAGATGCAACAATCCTTGACGTA
ACTTGTATTAAGAAGTGAATTTCATCGTTATTAAGTTAAGATGAGaagtt
tttggttgttttctggtttttatgatttttgaattattccAAAGAAGATT
TAGCAGAACAGTGATCCAACAGGAAAGCCAATCGAAACAGGTATTATGTT
ATTCCAGGggctttgctttgtttttgataggCTGGCGAAATAAGAATTAG
CTCCGGCGAATTCTAAATTCTAGGCCAGCGAATTTTTAGTAAGCTCAGTG
TTTCGATTAGCGTGAGTACGTATTTGAGGCGGCGATCCGAAGTTTTAGAA
CggcgaattgtaattttttcctGCCTTGGACCGACGAATTGTTATTTTTT
CCTGTCTTGGACGGGCgaattgttattttttcgtgccttggaccggcgaa
ttgttatttttttaggTACCTTGAACCGGCGAAAATTTGCCGTTTGCTTG
GCCTAAGTATGGACCTANAGTTATTCTGGGATCATAGTAGCGTGACGGAC
ATGCAACCGAAGTTTTAGACCGGTGAATTGTATTATTTTGTGCCTTGGAC
CGAAATTTGCCATTCACCGGATTAAATAGGACCCCTATCTCTCCTTCTCT
GTTACGCCTATGCCCTTAAAGGCGTCAGGGGCGTCTTTTCGCCCAATAGC
CTGACAAAGACCGGTTAAGATTCGGTCAAAAGtaaaccatagatttataa
agcccgaagggctagattgtctagatggagtgctttaagctcttccaagc
aaaaagaaatattgctgctattgttttcgaaaacccgcgaagcttatgat
tggtcaagcgctgaagttctattgtaatgtcacgtgacttaggtagaaTT
TCTTACCTAACCACatcacacttttcagcaaaagcacgatatctagccct
tcgggctctACAAATCTATGAAGTAAACACATTTTAGACAGAAACGGATT
CTCTTATCTTGGGTAAGCTAAGATGTACCACATCGTCAAAGTCTTGTTGA
AATAAGCTTTACTTCAGTGACTAGTTAGTTACTGTAGCTCTCGCAAAATT
GATCTAGAACAAGAATTCTAaaattgttcgaattacagagtaATTCGGAT
TATTCGAATTATAAAGAGTATTTTACGTGGTTTTCCCACTTCACTCTGGA
ACTAAGagttagttcgaattataaaataaatcagaataatagaggtttgA
ATTAGCGAAAGTTTACTTTGTCCTAACAAAATTAAGGTATTTTAGTCTTT
ATATTCATTATATTTAGTCTATagattttattactttgactGCTTGACTA
attgcacccctgtctcagtgccccggtagaactttttccctcagtgggga
tgaaaatttctatcaaaatgccaatgaggatagaaaatctattgtttcca
gctcgaaaactCCAGTGGGATGGTTCGCAGTGGGGTttaaattgtaggat
attttttccaccggggacgattttttggcctttttttccaccggggtggg
ggtccaccgggtctgtgacacaggggtgtctaatTGCTTAAAAATTACGC
AGAAAGGGTTACAAAAAccgttaaaaagcaaaaaaggcCCTGGGTTtcga
aaattaccaaaatcaaaaatcgactCCCTCAAAGGGTAATGAATCTTTGC
AACCTGgactaaaatcaaattttggcTAAAATGTAACTATGGGTCTATTT
TCGAGCTTTtactcggacatacccgtcatctcgcaaTGCTAGTTACCCCC
CCCCGGTTTTCGGCAAATGAATAGTGCATTATTCGATAGTGCATAAAAGA
GGTTAAACTAGAtgtaaaaacaaattcaaaattcgaATAAGAGTGTGtga
cctttttttattttaattaaaaaagcaTAAGCATTTGGAGGCTTTCGAcc
tatgacttaagtttgacgTAATACCCCGACTATAAAAGGTCGTCACGCAT
TTTTTGTTTAATGATGACCTCTAATTAAACTGTTTTGGCACTAACTTCAT
TAATAAGAGGGCGAAAAAGATTGGATGTGCTATACGCGATAAGATTATGA
TATGATATCGTTTAACTTGTATGTTAAAAACAGAGAGAGAAGATAATATA
TAATGAAAACAAATTTAGATATGGGATGATTGTATTAGTAAGGATGACAC
AATTtcgcaaagaaagattttctaaaCAAACCATAAAATTGTGCAGTCAG
ACTTATAATACAGTATACTAAAGAGCGGTTTGGATGATAAATTTCCGGTA
AATTTCTATTGAGGCtgatctaaaaatattcttattttgtttAGCTTTTA
GATTGAACCTCggcatgttcttaacttgttctcaatgTCGGGacaatttg
tttgtttttgttggttgTTGTATATCGAAAGTTTAAAATCTTGAGATTGT
TCATAAATTGTTCTTGtatttatagcaattttttagtCTGCtaactttca
ttaaaaaaataagaacttttGCGACCACAATCTAAGACTCTTCTTTCGAT
GGCTCTCGAAGATAGGAGTAGAGCTTCTCTCTTTCTCCCGGAATTGCTTT
CCCAGctggcatacaacgttgttttaacgttactccaacgttatatggac
gttgtgaacgttagataaacgttgacacaacgttgtgtgccattgCTTTA
CTTACGCCTTGATCCTGAACCTTCCCTTTAACTGCTAAGCACAaaacaga
gaggcatcaagtaccattttggggaTCTTGATGTAGCCCAGCTTTAGAGG
TTACACCCACAACCTTGGGCGATCTAGTCTAATGACCTACCTTTTGGCTA
CTCCCAATTCTAAGGCTAAGCATTGATGAGAATTTTAGCCTGTGATCTTT
GTCTATTTTCTTCTTTAGCCGTGATAACAACAATACCAATAGTAGCATGC
TTGGTTATCATTTCCATGACGACACCAATGGCAACGCAGTCAAATGCATG
GATGAAAAATGTGAAATCACTAAAAAGAGAATCGAAAAGTATTCAGAGTT
AGTTCACAAGGTAAGTGCAAGtcttaaatcttgaaaatacaccttttcga
ccttaGCCACCAATTGCTGCACgggcattttttaccaccctagACTCAAT
CCAATCctctttttacacttttttctattgtctttaggcgcgaaaaaaga
ctgggacggttgtagggtggtaaaaaatgcccGCACAGCAATTAGCGGCt
atggtcaaaaaggtgttttaAGCAGTgaattttgctttttattttctctt
attttcttATACACCCTAGGTCTTAGAAAGGGGCGTTAGGATAATTTTAA
TCTGTGACactaaaattatatttaaattttccgcttttcttttttgaagg
aaGAAGAAATCATGGAAAAATATGTAAGTTCACAACATTGTCGACTTGTT
TTCCATACTCAAAATTTAATGGGATAACGTCACCCTAACATTCTCTACCC
TTTTTATATATATGAATGCgtaaatgggctttttcacttgcgtgaatgct
tgaaaatatttaaaaaattgcatgatTGTGTGAATTGCAGGTCTGCATGC
GCCGCTTTTATTgggttttccagaaaaaaaccgtacaccACCTGTTAAGG
AGCTCCAACATTTTGTGAATCACCCcattggaattccaggcaattttagg
atcatacccctctggaattccgaatttttacagattttcattcattaccc
ccatggaattccactaacttttgacggatttttgtcAACTGCTATGGagt
tccactgcatttcaaatcatacccccttggaatggaaatggactcctcaa
caggaggtgcacggttttttttctagaaaagcccaTTGCTGAGGAGCCCT
CGACGTCTCTAATATTTTATCGCTTATATCAGACGATTTTCTAGAAGGAT
GCTTAAAAACCATTACATATTTACACGCAGAGaaacaaaattaatttgat
aTCTGTTTTGAAGTATTTGGAGAAACGGAGATAAGAGAGATATCGAAAAT
AGGCTCCCGGGCCTAATGTTACTTAGATAGATAAAGTGTACTTAAGTGAC
AATAAAAAACCTGTCGAGATTAAGCtaccttttcaaaaaaaaggatAAGA
CCAGGGCTAAAACTAATcaaataaaatccaaataaaaacGAGGATGGTGC
TTGTCTTATGGACACTGGGGTCTAGGGTGAGTTGCAAAGGGTTCAGAAAG
CCTAGTAAATAGAACATCTTGTTTAGGATTTCGAAGTATTAAAACTTTTC
TGTAAACATGTTTGAAATGCTGAGATCAATGACCCGCTTATGCAAAGCTT
GATTTTAAGAGACGTTTTAGTATTTAGATCACGAATAAATCaatcatttt
tctatttttaggaAAAGACAGTAGAATTGAG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00050894TCONS_00050894Clytia hemisphaericatranscript
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_19supercontigscaffold_19:754837..762267 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0	8.19	10.23	10.33	12.74	6.77	7.77	3.77	5.09	0.39	0	0	0.12	0.15	0.75	0	0.65	0.38	0	0	0	0.42	0.38	0	0	0	0