XLOC_032258 (gene) - C. hemisphaerica

Overview
NameXLOC_032258
Unique NameXLOC_032258
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_19:763212..767291+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_032258 ID=XLOC_032258|Name=XLOC_032258|organism=Clytia hemisphaerica|type=gene|length=4080bp|location=Sequence derived from alignment at scaffold_19:763212..767291+ (Clytia hemisphaerica)
TGTCCGAAATAGATCAAAGATTCACTGACGTTATTACTCATGGATCACCA
AAATCAAGACGATTTTCTGTACCAAGCAAATTGCTGAGTCAGCATGATGG
TAACCATCATCACCATGACAACCATGCAgtaaacaaaataaagaaaaacg
gTGTCCATCAGCTATCAAACGTAAGGTTGTTTCAAAGTCAAACAAGGccc
aatttctttggaaaatttatATCTGTTATCTATGCAGGGAGGACAGGGGT
ACCTGTAAAAAATGAATGCTGGCAACATGTGTTAAGGGTCCGGTCAGATG
GTCCGGCATGTACGTACCCAGCATCACTTTACCCTTAGAGAGGaatgaat
tttgctgaaaaggtgacccttgagtgtttctgaaaaaatcggcccttaga
gagactagtttaaaattttctgatttttgcaacccttagagagactcaac
cctagtaccccacCCCCAGGATATATACTATGCAAGAAGAAAGAGCCAAT
CCCAAAAGGGTTATAATACTgaaaatgtttacaaaaatgtttagCCTGAA
AGGGAACTGGTCCAGGTTGGAAAAATTTATCGCATTATTTATACTCCTTt
ctaaatttttgctaaatatgCGAAAAAGGGACCCGACTATTAAGGAGCCC
TCTGGGGAGGCGGGTGGCTGATAAAACTATTAGGTACAGCTAAATCGTGT
ATAACGATATTAAGCTAACATTTGCAAAATGATCATTCCTCTGTGGTTGC
ATATACATTGTCTGCATTCTAAAAGTTGTTAATCCAAAGGTCGATAATCT
TAGACTTAGACAACCTTTAGAGAATTTTAAAAAGGGTATTAGTGTAAACT
TGTCATATCTTGCGCTAGACACAATATTAACaaatatgtgttaaaaagaT
CCTGTCTCTTCCTAGGGTATTTTGGAAATGAAAACCTTCAGGACATTGAC
ATATGTGGTTCTTCAAACCATTAGAGAGACTCCCAAGGGGTCTTTTGCAA
GTTATTACTCAGTaacgtagacaggaggggcgcaaaatttgtgtaggggA
GCAGATTTTATGACacggtaattatctttttacattatgaatagataatt
accgTGTCAttaaatctgctctcctacataaattttgcgcccctcttgcc
TAAGCTACTGATTGTGACATCTAGCTTCCTTTTCGATTCGATCTCCTTGG
CTATTAGATTTTTGACGAAAGAAGTAATTCCATCCCGCTTTAGACTAGAG
TCGTTTATATTCCGTGTAATACATTAGGTTGtaatatgataatacgataa
ttgttacggggTGATATCGGTTTGTATCAactacaatacaccttttcgac
cgtagccgccaattgccgcgcggggaTTTTTTGTGCGTTTAACCACCATA
AAACCTTCGcagtcttttttcgcacctatagacaaggtgtaaaaaaagga
ttggatcgagtttatagtggtaaaacggacaaaaaatgcccgcccAGCAT
TTGGtggctacggttgaaaaggtgtatttgtcCATTGTTTTTTTGCCTAT
TTCTTAATACGTATGTCTGATTGTATAACATATGCTACAACTATTCCCAT
ACTATTTGGCACAAAAAGAAACCGCAAttaatttctaaatttcttaaatt
agaGTAGGAAAACAGAGTTATAACATGTGACTTAAGACTTGGGAGcttag
aatctgaggatccaaaagcttaTAAATAGTCCGACTAGGGTTAAAATATG
GCCTGGCAGCCATTTTATCCCTCCTGAAAGTTTCATTCTCGCCTGAACTT
CTGCAAAACGCTAAAATACCCAGAGATGCCAACATTATTCCAACCACCAT
TGTAGACTAACCCCGgtctattaggtacccgagagaaTACAGGCTATGAA
ATAGTTccaattatttcttttttcaggtCAGTGAAGTTTCTTCAACTGAG
GATTTACGTAGACAATCTTACCTGTTACAGAGCAAACTCCAAGATGTCAC
ACACAGCTCGTCCATGCCTAGTTCACCTCTTATGTCAAGGAACAGACGTA
AATCGCACATGTCACCCCACTCGTCTCCCATTGCAACTagaaaaacaaat
aaagatGTTAGCTCAgttaaatcaaatttcaatcagcAAATTTCTGGCGA
TTGGTCTCCCGACGGTTCTTTTGAATTAGACTCGCCCACCCAATGGAGTA
TAGGTAATGGTATCCAACGCTCGTCGCCCTTAGTTACAAAAAACACTAAT
GGTGAACAAATACCACGGCGCAGTCGCAAAACTAAAATGGGGGATATTTC
TCAAAACGAGTCTATTGAAGTGAGATCATTACCATCATCGCCATTAGCAA
TAAACCAAATAAATATGGCAGATGCTTGGCTATCGAGAGAAACCAATTCA
ACGAAATCTGACCAATCAGAAAGCTCGATTGAACGTGAGAGCCAATCAAA
TGAAGCAGCAAATCAAAACCGTTCTAAAACTACGTCAGCCGAAATACTTT
GCAATGCTGTCAAGAGACGCATGCGTAAAATATCAGCATCGGctgaaaat
ttgaatgaaatgaAAGAGTTAAAAGACAAACGTATAAAACAATTAAAAGA
TTCGAAAACAATGCCAAATTCTACATCATTAGATAATATACACTTCGTAT
CTTTGGCACCACACCCTAAATCGATTGCACAGCTACATCAACATTCTTCT
CAgagtaaaacaaaaagatttcatCGATCTTTGGAAAACCTGATTTCGAC
ATCACAAAATAATGGTACGTCGTCAAATGAATCAAACCTAGAAACAAATG
AGATTCTTGGACATAAAAAAACTTCGCCTAGGCGGACGCCTTCACCAGAG
GGCGGTGCCGTACCAAAAACACTTGCAAATGATGAAAATCTTGTTACCAC
CAACGACCACGTCAATGAAGTTCGTAAAAGACGTCAAGCAGCAcgtcaaa
aattaaaacaacgTCAAAATCTATTGAACGGTCTTAACAAAGATATCAAA
ATAGCGAATCGTGTTTTGCGTAATTTACGGACCAGATCGATGCCATTGCT
TGACAAGATGGACATTAATTTTGAAATCCCATACGAATTCATACAAGCTG
TATTAAATTCAAACAATCATGGTGGAATTGATGATATTCATGGACATATT
AATGATTTGATTGTCTAAAACATTTACCGTGACTTTTTTGTTGAATCCAA
GTTTGAAAGCTGCAATCAATTCAAAGTTTTGGTGAAGAAGTAATCAGCTA
TTTTTCACCATGTATTTGGTCACCCATAAAAAAAACACGCCGAATATTTT
TCTCTGTAAATCTCATAACTTTTAGATAGTGTGTCCGGAGAAAATGCAAA
TTTAAACCTACATATCTTGTGATCGAGCCATTGAAACCATTGACTTCGAA
GCCCAacctcctggatgggaaatgaagccacttatttccaatCCAGAACG
CCTAAGTGTGGTTTCTATACAAACGCCGGGTTAAAAGTAAAATCTGTCGc
tgaattaaaaagaaacagccctcaaaaacaaaggatcagcaagatacaat
ccgtcgtcatgattgcggtgTGTTCTAGGCGCTTCtcgatgggaaataag
tggcttcactttttcttgcctgaaaaAGGTtcgagattctactctagccc
ttcaggcttttaGATCTCAATGATCGAAACCCTATTTATCAATGGAGGTC
TAAATAAAAACAGTAGAtgtgctcgccctacgattgaAAACTTTATGAAG
TCATAATCTCATCTGGGTGTGTCAAAAAACGCCCCTATTTCTCGATTTTT
GACgttaaaatttctattgaactGAAATTTGtagttttgaaattgaattt
tttaccttttgtgaaaattatacatttgtgtgttcatttaaaatgacttt
aTGACAATTCCGCTGACTTACGACAATTTTTCACTGCTCACAGATTTTTT
CCTAGTGGTTTTAGGAGTAGGACCCATAagagaggcccccccagcggacc
ctcaattcacgcaatcacgcaattttttttcgaaattcacgcattcacgc
aaattttcctcaagtttcacgcaataaccc
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00050895TCONS_00050895Clytia hemisphaericatranscript
TCONS_00050896TCONS_00050896Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00050895-proteinTCONS_00050895-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_19supercontigscaffold_19:763212..767291 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.2	0.06	0.18	0	17.22	11.73	17.69	19.02	9.3	14.54	6.75	10.1	1.84	2.34	0.13	0.31	1.81	1.93	3.32	3.34	0.71	0.92	0.58	1.28	2.39	1.22	0.18	0.05	0.69	0.89