XLOC_032268 (gene) - C. hemisphaerica

Overview
NameXLOC_032268
Unique NameXLOC_032268
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_19:596396..606299-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_032268 ID=XLOC_032268|Name=XLOC_032268|organism=Clytia hemisphaerica|type=gene|length=9904bp|location=Sequence derived from alignment at scaffold_19:596396..606299- (Clytia hemisphaerica)
AAAAAAAGACATTGCTAAAATGTAACATAATCAAAACTGATCAAAACAAA
CTCTTTTAAATACAAACTAATACAGGTATGTTTTTCTCCGTTTCAATTTT
TGCACTTTTTTGACAGTTTTAAGGAGATAGATAATCATTATTGCTAGATT
TCAGTGACATTATTTCAAATATATACTTCTCATGGTCGCATTTTGAACCT
CCTTCGTCACACCCTGTGTCACAGACCCGCATGGAAACTTTGGCCAAAAT
GTCGTCCCCGTTTGGCAGAAATACCCTACAATTTCAGCCAGGCTTGAATA
CAAACTTTGAATTCGAACCCAATCAAAATTTAATGTAAAAAATTACACTC
CAAAACCTTCCCCACTGGATGTTTAACTTAGGAACGATCAAATTTTTATC
CCATTGGGATCTCGCTATGGGAAAAAGTTTTACCGGGGTTGTGAGACAGG
AGTGTTTTGTCCCTGCCAGGGGCTGGGCAGCTTTCTCCAGTCAAATGTTT
AGCAAAAATTACTGCCAGTAAGAAACATGCTCTGAGATCTCATTCTCAAG
GGGAAATTGCTTTGAGCTCTCATACCTATTAAGTAAAACTCTCGTTATTT
AAGGAACCCTTACTTGAATGTTATATTAAAATGACATATCATATTAATTA
TAGCAAAGAACTTTTAATCCAAATTCATTTATCCCCAACGGTTACTGAAA
CAGGGGTATTTCTGATATATATATTTTGCTACAAGGACAAATAACCCATG
ACACTTCTGGCTCTTAAATCTTTACATTGTATATTCCCCCTATATTCCTC
AATAACATTTTAAGGATAAAACTTCACAACGACACAAGAGTAGCTTTAAC
AGTGAGAATTCCAAGAAAGCTCGAGGCTTAAATCTGTTTTAAATCATTAG
GAAATTCCTTTCATGTTTCAATTTTATGATAATTTAGTTATTTTTATTGC
TTTGATCTCTTTAGCATCGGTTTGTTGTAACTCCGTGGACAATGAGATTT
TTGCAAGGCATCATCGCTCTCACTCTATTGACAGGTTGAGTTTATCATTT
CTTAATTTTTCTTTTGAACTGAAGTCTCTTTTTCCTCTCAATGACACGTT
GTTTCTTTATAAGAACATAAGATTGCCAAAACATTAAGAACAAGTTTCAT
CAAGATGTGCAGACTTCTTAGCATAAAAAATATGAACATTTTTAGGCTTA
AACCTCAAAAGTTTAACAGCATCCGAAGGCTTAAAAAAGGTTGGACTTCC
TTAGAGAGAGATTAGGGAAAATTCATTAAGTGGTGGAAATTTGTTTGGGA
TGTAAGAAAAGTGTTTACGCAGTGAAAATTCCAGGAAACCTCTTAGCCTA
AATCCCTTTTAAATCATTACAAAATTAAAGTCTGTCAAAATAATTTGCAG
CTGAGACAATCAAAAGGTATCACACTTTCATGTTTCAACTCTATTTTTGA
TACTTAAACACCCCCTTCTCACAGACCCACTGGGAACCCTTCCCATTGGA
AAAATCGGCCTAAATATCGTCCCCGGTCGAAAATTATCCTCCTTTAGCCC
CCACTAAAAATAATCAAATAAACCAATCCTCCCTGCAAAATATTATGCAA
TTCTTCCCAACCCTACTGAATTTACTGACTTGAAAACAAAAGAATTGGAA
TCCCCAGCCATAGAAATTACGGGATCCCCATCGAGTTTCTGTCTGTTTTT
TTTTATCTCCACTTGCTGAAAAAATCCTACCGGGTCCGTGAGAAGGGGAT
GTACTTAAGTACAACCTTGTTTCACAGACCCGCTGTTGGGAAAAAGTTCG
ACCGATGCTGTAAGACACCCCTGTTTAAGTGACTTTTATCGTTTTGGTCA
TTTCAGCCTTGGTCAGCTGTAACACAGTGGAAAAAGATCAACAAGAAGCA
AAGGAAGCTTTGAATAAATTATTGAAACAAGGTATTTGCTTGGATATTGA
TGTTATAAAGAAAGATAGGCTTTTCTATGGGAATCATTTCACATGTATAT
TGCCAAATATTACTTTGGTTGATTTGATTTCGAGCTTTGTGAAATAATTA
TTAAGCTTCTGACCTGAAACGTTAAGTGAAATTTTCTTAAATGAAAACGT
TGACTTATATATTTTAGATTTTGAAATTGAATTTATATCGGATTTTGAAT
TTCAAAGTCTTTGAAATTAATTCATCGAGAACGTCACTTTGATTTAGGGG
TATCTACTGTAGAGGTGGTACCAATGTATTAAAGGGTTAAGATATATATT
AATACCTAGGAACATGGAGTCTAGCCTATTTCATGTGGTTATATCCCCTG
TACCCTGTTTCATTGAATGAGAATGATTAATTATGAATTAAGTATGAATT
GTTTGCATATTTAATTCTTTCAGGGCCATTAGGACACCTAATAGGCGACG
GGTCGCAAACTTGTTTGATATGCGAGTTCATTGTAGGAGAATTGATGTAC
CAACTAGAATCAAATACTGTCAAAGTGAGTACAATTTTACAAAAATGTAC
GGTAGAAACCTTTTTTTCTGTCTTGAAGGGCTTGAAAAATGTTACTTAAA
TTTAGCTAACTAGTGCTCAGCAATCGACCAGAATATTTATTTTCGCACTA
TTTTACTCACTTTTCCGCCGAGCCACTTGGCCTGTTAATCTTAAACATTT
TTTGATCGATCAGTGAAATGTCCATTTGGAGCTAAGCCCAATCGGGAAAA
CGCCTGGTCGGGGAAAACGTTCGGCAGCATATTTGAAACTTTATCAATAT
TAATTTTCTCCATTCATGCGAAAAGTATTACAAATAACGTAATCAGGAAT
CATCTTTCGAGTGATTATTTCGGTCACAGGCCTTTTTCAAAATTTATTCA
TATAGAAGTTTGTAAATGTTTCGATATATAGGGAGCCTCATTATATAACA
ATTAAGAAGAAAACAGTAGAATAATTTCATGTCTTCAGACGATCATCAAC
TGCAATATGTGAAAACTTGATTTATACGAATCTAATTTTTATCAAATTAT
AGACAGAAGTTCTACCAGCTATCGAAGAGAAGATTTGCCAACTGTTATTT
CCTTCAAATGGTCTAAAGAAACGGGTCGTGACTTCTGGGGTAAGTTTAAT
AAATCCGTCTGCTACTTAATTTAAGGCTAACCAAAACTTCTTCTTTGCTA
CAATGTGGAAACCATCCTCAAGGCCATTGGTCTAATAACCTAACATGGTT
TACAGATTGCAGCAAAAGAAAGTAAATTCGCTTTAAAGCGAATGGACTTG
AGCTTGTGAGAATTCCCTTTTGGAAAAAAGTGCAAGAACTAATGTTGCGG
AAAGGTATGCTATTCGGTAGCTTTGATTATTTTTTGCATAAAATAGATAA
GTAAATTAGGTTTAAATTTTAAATATAATTATTTTAGAATGTAATGAAAA
ATAATAAAAAAATGAAATTTATAGCTAACAGTAACCTGCAGTCGAATAAC
TGTAGTAGATTATCAAGGATAGGAGAACTTTATGTTATTTTTTAATGTAT
GTCATAAGATTAAAATTAATTTTTTTTCAATTAATTCTTCTTGGGCCAAT
CAAGAAGAGAATGCTCAACATTTAAAAAGACTCAAGATTTTAATGAAAAC
CATCATTTAGGAAATATATACCCTTACTGCTTAGAAATTTCTTTTATGGA
AGCTGTTAACAAAAGAAGAGAAAAGGGTCAATTAACCTCGTGACATACCT
TAATGTGAACTGCATTACAGCTTCTCACAAAAATAGAAAATCTTTACCAT
TGGAAACCCACCAGTATTTTGAAAACGTGGTTTTAGTGACTCTAACCAAC
TTTATAAACATTATGTTTTTTTTTAACTTTTTTGTGGCAATGTTAGCGGA
TTTCGAGAAATAAATTTTGAAATTAGATTAATATTCTCACAAGTCAGGAC
TATGAGAAAAATATTTTCTCTTTTAAAATAAACTTATAACCTGAGAACCT
AGAGACTTCGATCTAAATTTGACAATGCATTAGACAAAAACACGGAAAAT
CGACTACGCAAAAATCACAACCTCTTTACTCAGCAGTAACTTTCCCCACT
TTTTCACCAATGAGTTTATTTATGTTGGCTTGTACCATCCCGTTTTGATT
CTGTTGAATATATCTATTAGAATATTTAATAGGATTCGTAGAAAGGGGGG
GGGACAAAATTTGTGTAGGAGAGCATATTTTATGACACTGTTATCATCTA
TTCATAATATAATTACAGTGTCATAGAATAAGTCTGCCCTCCTACACAGA
TTTTTCACCCCTCCTGTCTACGGTACTGGATTCGGGCATCTTTTTGCATC
TTTTTCGTAAAATGCACAGATCTGTGCAGATTTCCCGCGACAAGAATTTT
TGTCATTTGTTCAATTGACTTGGAAATTCATGAGCTCTTTTCTATTCCCA
TTTCCTTTGTAAATTTTAACCCAAATGCGCAAGAGAGTGTTCAACCATAA
ATAAGATGAACACATAGGAATCACACCCTTCAGAAATTCTGCACTTAGTG
AACATTATTTCTACACCTGTGTCGGGTTGAATCTGTAATTTGAGTGGTCA
ATAGAGCATCCCAAGTCAATAGAGCAATCCTACTGTACATAATTAATAAG
AAATCAATATTTTAGGGAATTTCCATCAGCCCCGCAAAAACCCCGCCCGA
TTCTTTTTTGATATTTTTAATCCTTTTAATGACCTCTGTCACCCGCTTTT
TATTTGAAATTGATATCTCATGCAATAATTTTTCATTGAAAAATTAAACA
AAAAGAGTTATTTTTTTCTATTAGTGCGAAGATGTTGCTGACTTACTATT
AAAAAACCATTACCAGCTGATAACTTCAAATAAAAGAGTACGAAAGAGAT
TCCGAATAGTGAATTCATTATCATAATCTTGATCAGAAAATTGACAACGA
ATTGNCCCCTATATTCCTCAATAACATTTTAAGGATAAAACTTCACAACG
ACACAAGAGTAGCTTTAACAGAATTCCAAGAAAGCTCTAGGCTTAAATCA
ATTTTAAAGGAAATTCCTTTCATGTTTCAATTTTATGATAATTTAGTTAT
TTTTATTGCTTTGATCTCTTTAGCATCGGTTAGTTGTAACTCCGTGGACA
ATGAGATTTTTACAAGGCATCATCGCTCTCACTCTATTGACAGGTTGAGT
TTATCATTTCTTAAATTTTTTTTTTGAACTGAAGCCTCTTTTTCCTCTCA
ATAACACGTTGTTTCTTTATAAGAACATAAGATTGACAAAACATTAAGAA
CAAGTTTCATCAAGATTTGTAGACTTCTTAGCATAAAAAATATGAACATT
TTTAGGCTTAAACCTCAAAAGTTTAACAGCACCCGAAGGCTTCAAAAAGG
TTGGACTTCCTTAGAGAGAGATTAGGGAAAACTCATTAAGTGGTGGATAT
TTGTTTGGGATGTAAGAAAAGTTAATACGCAGTGAAAATTCCAGGAAACC
TCTTCGCCTGAATCCCTTTTAAATCATTACAAAATTAAATTCTGTCTCAA
AATAATTTGCAGCTGAGACAATCAAAAGATATCACACTTTCATGTTTCAA
CAACTAGTTTTTGATACTTAAACACCCCCTTTTCACAGACCCACTGGGAA
CCTTTCCCATTGGAAAAATTGGCCTAAATATCGTCCCCGGTGGAAATTAT
CCTCCTCTAGCCCCCACCGAAAATAATCAGATAAACCATCCTCCCTGCAA
ATTATTATGCAATTCTTCCCAGCCCAACTGAATTTTCTGACTTAAAAACA
AAAGAATTTTAATCCCAGCCGTAGAAATTATGGAATCCCCATCGAGTTTC
TGTCTGTTTTTTTTTATCTCCACTGGCTGAAAAAATCTTACCGGGTCCGT
GAGAAGGGGGTGTACTTAAGTACAACCCTGTTTAACAGACCCGCTGTGGG
GAAAAAGTTCGACCGATGCTGTAAGACGGGTGTTTAAGTGATTTTTATCG
TTTTGATCTTTTTTAGCCTTAGTCAGTTGTAACACAGAGGAAAAAGATCA
AGAAAAAGCAAAAGAAGCTTTGAATAAATTATTGAAACAAGGTATTTGCT
TGGATATTGGATGTTATAAAGAACGATAGGCTTTTCTAGGGGAATAATTT
CATTCTTCACTGTTCAACTCTCTAGGACCTGGTGACCATATATTACTTTG
GTTGATTTCGAACTTTGTGAAAAAATAAATAAGCTTCTGACCTGAAACTT
TAAGCAAAAGCTTCTTAAACAAAAACGCTGACTTTAACCTTTCAAAAGCG
GGCGTCAGTATTTAAGATTTTGGGATTGAATATATCGAATTTTGAATTTT
AAAGTCTTTGAAATTAGGGATATCCGAAATTAGTTTATCGATGCCTAAGG
GCATTGATTAAAAAGGAATTTTGTTTGACATCAAAGAGCATCGATCAAGG
TGAATCAGTCCAGGAGTCCTCAGCGAACTGTTTTTTCAAACATAAAAGAC
GATTAAAATGGGAGTGACCTTAATACTCTAAGATCTTGAATATCTCATGG
CGTGTACCTAGGGCTCGGCTAACTCGAAAAATCCATCTTCCTAATAATGG
GGTCACAATTAGCCCTAAACATAGCCTATTTCATGTAAATATATCCGCTT
ACCCTGTTTCATTGAATGAGAATGATTGATTATGAATTAAGGTATGAATT
GGTTGCATATTTAATTCTTTCAGGGCCATTAGGACACCTAATAGGCGACG
GTTCACAAACTTGTTTGATATGCGAGTTCATTGTAGGAGAGTTGATGTAC
CAACTAGAATCAAATACTGTCAAAGTGAGTACAGTTTTACAAAAATGTAC
GATAGAAACCTTATTTTCTGTTTTGAATGGTCTTGAAAAATGTTACTTAA
ATTTAGCTGCTTAGTGCTCGGCAATAGACAATTTATTTTCACCCCATTTT
ACTCCTTTTTCCAGAGGGCCACTTGGTCTGTTGATCTTAAATATCTTTTG
ATCGATCAGGGAAATATCCCTTTGAAGCAAAGCCCGATCGGGAAAACGCC
TGGTCGGGGAAAACGTCCGGTAGCATATTTATAACTCTATCCATATCAAT
TTTCTCCGTTCATGCGAAAAGTATTCCAAATAACGTAATCAGGAATCATC
TTTCGAGTGATTATTTAGGTCACAGGCCTTTTTCAAACTTTATTCATATC
GAAGTTTGTAAATGTTTCGATATATAGGGAGCCTCATTGGACATAACAGT
TATGAAGAAAACAGTAGAACGGTTTCATGCCTTTAGACAATCATCAGCTA
CAATATGTGAAAACTTGTTTTAAACAATTCTAATTTTTATCAAATTTTAG
ACAGAAGTTCTACCAGCTCTTGAGGAGAAGATTTGCCAACTGTTATTTCC
TTCAAATGGTCTAAAGAAACGAGTTGTGACCTCTGGGGTAAGTATAGTAA
TTCCGTCTTCTACTTAATTTAAGGTTAATCAAAACTTCTTTGCTACCACG
AGGAAACCATCCTCAAGACGTTGGCCGATAAGGTATGAGAAAAATTCTCT
TAACACAACTTATAACCTAAGAACCTAGAGACTTCGATCTAAATTTGACA
ATGCATAAGGCAAAAACGCTTTAAAATCGACTACGTAAAAATCACACCCT
CTTTACTCAGCAACTTTACCCACTTATAATACACCCTGTGTCACAGACCC
ATTGGGACCCCAGCCCTACTAGAAATTTCGTCCCTGGTGAAAAAGTGCCC
AGGAATTTCAGCCCCACTAGGAAATTGACTTTCATTTCATCCCACCCGAA
AATTCGATTTCTAAAAAGTGCACTCAAAAACTATTCCCACTGGATTTTTT
AACCTTGGAACAATAGAATTTCTATCCTATTGGGATTTTAGTAGGAATAT
TTATCGGCTTGCATACGTAATTTGAGTCGATTCTCAAGTCTACAAAGCAA
TCAAAATCAATATTTTACACCAGCCCCGCAAAAAAACACGCCTTTTTCGA
ATTTTTCTCGATATTTTTAATCGTACTAATGACCTCTGTCACCCAGTTTT
TATTTGAAATTGAAATCTTCTGCAATGATTTTTCATTGATTACGTTAAAA
AAAAGAAAAATTAAACAAAAAAGAGTTATTTTTTTCTTTTAGTGCGAAGA
TGTTGCTGACTTACTATTAAAAGCTTTGCTAAAAGTGTTAGATGACGACA
TCAAACCGACACAAGTTTGCCAGAAACTCACCATATGTAAAAAGTAAGTC
TTTATCATCCATGACACTCGATTTAGACATTTTCCTCCGACATGCCCTAT
AACTCTGAAGGTCGGAAAAATTACTTGTGTTTCTAAAGGGTCCCGAAACA
TAGAAAATATCGAACCTAATTCATTATATAAATTACGTAACGTTTTCTAC
AGAAACCTCTGTTTTTTTTGTTAGTAGTTGCAGATTTCACACAACATTTA
TATTTCGCTTAAATTTGCCACTTCTGGTTAAAACCACGGTGCCTCTGTAG
AATACTTAACGTCATGAATAAAGACATCATCGTGCCCGATTCTATTATCG
TCATGGTAGAATAAAGAGTCCCCCTAACTCAAACCAAGGTTATATCTACC
TTTACATTCCAATTCAAAGCTCTCTCTATAGAGCCCAGGGAAGGGGTACT
TAGGTGAAATAGGTGTCAGGTATGTATAAGCCATAAGGGTCCCATTTTCA
CAACCTCGAAAGTCTCACAGAGGGGTACAAAAACCATTTAAAAGAAAATT
GAGTCTCTGTAAAGGTCCAAAATTCATGAAAATTTCCTCTTTCTTTGCTC
GGATATACCCGTCAACTCGCAAACCTAGTAGCCCCCCCCCCCCCGNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGGGGGGGGGGTACTAGG
GTTGGCGAATGAGGGGTATGTACGGACGGGACCTCCGAAAGCCGACCCTA
AGAGAGACTAATTTTTGCTGAAAAGGTGACCCTTAGAGAGACTGATTTTT
GCTGAAGAGGTGACCCTTAGAGAGACTGATTTTTGTTGAAAAGGTGACCC
TTAGAGAGACTTTTTGAATTCTATTTTCGATTTTTGAAAAAAGTCATACC
CTTAGAGAGACTTTATTACAATTTTTCTATGGAAATCAAAAAATTTCCTA
AAAATCCTGAATTTTCCGACCCTTAGAGAGACTAATTTAAAACTTTCTGA
TTTTTCCGACCCTTAAAGAGACTTTGAAAGGTGAAAAAAACCGACCCTTA
TCGTCCGCACATACCCATCATCCATTTTTGCCTAAGTACCCCGGGCTTTT
GGTGATCCGTGAATAAACTACGTTCTTTTTTTTGTTCTCTTTCAGAGATG
AACTTGTCTTTGCAAAGAAACGTCATTGAAAGGGTAAAACACCGACTTTG
GATTGAAAATCTTCTGACAAACGAGATCTCATGACAGCTTGTGATATGAT
ATCGATCTATTTTTGGTCATTTTTTGGAAAAATTTTCCCTTCCAAAAATT
TATGACTGGATGATTATTCTTTGTAAGAATTATAAATTTATTTAGATTAA
GATTTTAATTTTTATTTGAAAATTTAGGTTACAATGTTCACGAAATAATT
TTTCAACAATTTTATAACTATATTTAGATAACGGATTTCATAGATTTTAA
TTTTTAAATCTCCTTAATATTTTTGTAGACAAACGGAATTTCCTACCAAA
TTTG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00050923TCONS_00050923Clytia hemisphaericatranscript
TCONS_00050922TCONS_00050922Clytia hemisphaericatranscript
TCONS_00050921TCONS_00050921Clytia hemisphaericatranscript
TCONS_00050920TCONS_00050920Clytia hemisphaericatranscript
TCONS_00050919TCONS_00050919Clytia hemisphaericatranscript
TCONS_00050918TCONS_00050918Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00050922-proteinTCONS_00050922-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_19supercontigscaffold_19:596396..606299 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.13	0.37	1.69	0.17	0.97	0	0.5	2.28	17.21	8.76	22.49	13.52	37.49	33.42	66.19	69.4	49.97	52.42	47.77	40.39	108.51	101.56	128.3	123	82.57	72.9	68.25	86.84	623.41	501.33