XLOC_032325 (gene) - C. hemisphaerica

Overview


Name	XLOC_032325
Unique Name	XLOC_032325
Type	gene
Organism	Clytia hemisphaerica (Jellyfish)

Sequence

The following sequences are available for this feature:

gene from alignment at scaffold_190:34606..41240+

gene from alignment at scaffold_190:34606..41240+

Legend: gene

Hold the cursor over a type above to highlight its positions in the sequence below.

>XLOC_032325 ID=XLOC_032325|Name=XLOC_032325|organism=Clytia hemisphaerica|type=gene|length=6635bp|location=Sequence derived from alignment at scaffold_190:34606..41240+ (Clytia hemisphaerica)
AACCAATCTTATGGTATCCGTTCCCCATTAGTCACCACAGAAAATTCTAT
GCTTCAAATCTCATCTGCTGTCAACTCGAATCATGACCATAAATATCTGA
AATACGGGCTGGTCATCAACAAGCCGTACAACATCAAGATTAGCCAATAC
TATATTGCAAATGGTCAATATAAATACCGAATTGAATTAGATGGCGAAGA
AGTACATAACACACTCAACAATGATGCCAGACAATTTTATGATATGAAGT
TCTATCTTTTGCGAACGAATGGTGCAGATTGTGACGTCTctgatttcaaa
tttgtaaatttcttaTGAAAACTCTAAACCTTTAACTAGAGATTATTGCT
AAATAGCATACTTTATTGTTAAATAAGCATACAATTTATCTGGTAACCAC
ATGGTGAAACTTTCATCcgaccatagtataagaaagccgcggctggaatg
ataacatctgaatttctcttgttctatctctgtcgtatttgatgactatt
tgttgatcaagaaatcaNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNtaaactgacaggaaagttgtcatcttgaatatagtt
cttataatttcaattttggcgaaaaactattgtttccacaaataccccta
aaatatgtccaaaattagatcaagtgttctattgggtacagactcgaaga
tatctagcaacaaaaatctttttgtggaggaaaataagagaaaaatttca
aaaactatctaccaataataaactgagcatcttgatgttcttataaagct
cggagacagagatgaaacagcaattaactgaaaagacaatgctgtacata
ttccagccgcggctttcttatactatgatccgacacgctaaagctctgaa
gatcaggcaaattttcaacatctggaaggtttacgtTACGGAATTTCGTG
AGACCgcttcaagaattttgcagtgggaggtctggtaacccagccctcgt
tttcggggatcggcaggtccaaccgaaatatttataGGTTTACGCACAAG
Ggatgttgaacccgactggaggtgcggcacatcaaaggccgactatcatt
cctctccgttgggaaattggcccgctcctttagagctttagcgtgggtgg
ccgccaatccgccatcggaatatcagataatcaGATAAGCATATAATTGT
TATAtagcttttttgtttctttttcttcttttgtttgttcttttttgttc
gctattttttattttgttgtttaatacacactttttttataagaatatct
tctaccTTATCGGGAAAGAAACGtcagagttttatttagtcggagttttt
tttcgtcggggaaaagtttcgtcacctagaggcattttcgtcactctccc
tcgaccaaaatttcaattcgtcacttttccccgacgaaatttacaatttt
gtcACTTTCGCCCAACTAAATCGTCCAAATGAAATGTTTTCCTTCACtaa
ctcgaaaaaagatcttgtaattcgacgaaGGCGCAaattcggttaataaa
ggtgtgaaaaatttagattttaattttggttagCCTTTTGCTTATTTTAG
ACAGGCTATTGTTAAAAACCGTACTTAAATATTCAAATGTATcctggttt
gtttacaaatttcgtcaatacttttatgtccctacaaaatcaaaacatat
gtcacatgtcaaaatcaaaaatcaaaacaaatatggctgattttgattgt
ttcaattgttttacaagtttgttttgcttTAAATATTCAAATGGGGTAAA
ATCTTGGTTATCTTTTAGGAACTTGATTCAATCATTCAGGTAACATGTAG
AccgaaaatcaaataaaattgagAACGTGTaaaagaatacacgtttttat
aagagcaaactgtataagaacataaggcttccatggctaaaatcttaaaa
acaagttaagaacatttaaaggctttgcggactcttaaacacccgatttc
ttatgaaaataggcaaaaatggtgaaaataagaacatgttaagtacattt
taagcttaaaatccaaaaagttaagaaaatccgaaggcttcaaaaagttt
ggatgttcttataaaaaaaacacgtaagaacaaaaaatcatcaaagtata
ccgaaaaagaaaatgttaataAATTGCAATCGCATTTTTTTTCTCGCAAA
GACAGTACTAGTATATGAAAGATTATCGTTGAACGAGGAAGAATAAAGAT
GCATCAAAACAAATCATCatcaactttcttttttctGGCAATTTTAACGA
TCGttgatttgtcttttttagAGGCTAAAAATAAATGCATAGTAAGTaca
aatactcaaaaaataccGGACACAAGCCAATTCCTGGTAAAGCAGTATGG
TGTCCGCTAGCTTTTTTCATCTgctggtgtttttttataaaagagctgta
ctctcgggtacctataatagccgtccccccgctaaataatttttcgaaag
ttttgcacccaagacattcttattccagccCCTTCCCcacttattgattt
ttgagagttttccgatccccctgcttattccaatctccccggctattagg
tacccgagagtatataACAAGATTTTGCTGATTTCAAGCAAAGGCATACA
TCACtgtgaatttgattattttcaatccaaattttttttctagaaaggaA
TACCAGAAAATATCCATGGAGCTAAGCCACAAATATTGATCAAAGGTAAA
ATGGACCGTTCGAGAAAAATTTtggtacatgggggtggaggatatattgg
atattttgtacGGGGGGGTAGTGAAATATCGGCGAAATTTGCCTTATTTG
GgggcaaacttgctctgttttGATAGTTTTGAATCTCTGGGAGGTCAACT
GATGCTTACCCGGGGGATCATAATTCACAAAGTAAAGGGTAAAGGgagta
aatttcaaaaaaatttcatatccTCTAGCCCCCATATTAATTTTTTCTTG
GAGAGGCCAATAAATATTTTCTGAAAAGATGAAGGAGAGAGAAAAATCTT
AAACCCTTCCCATGCAAGCAAAGTGAAAGCTTCTTAGAACTtgctaccgt
gaaaagcacagctcaaaatcatatatttacgctgtgccgacgaatcgaga
ttctattcatcgcgcaatcagcgaagacaaaagtaaccatgacgNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNaaaca
taaagtctgtctattatttcgattcaattaaagtgacatttccataatta
aaagtttagtaattactgttatacatttggggatcatgtaaaagatttct
ttcgaaataaactcatttcaactacacttggaggtttctggggaattcgt
aaatagtaaactgcatactgatacagtctgttagacattaatatggtaNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNcagtgattagattgacacatgcgcgataaaatttct
attatttgtcttcagaggttactattttctttgaaaacttaacctctgat
actcagggtaagaaCTTGCTCTTGATCGTCAAATCCTAATATTCTTATAT
AGcttctatttaaaaaaatgtacatACTCTGAAAGCCATTTACTTAGCCG
GTCTATAGGATAAATTTTCCTGTCTTAGAAATGAAAGCCAGATCTGGTGG
ATTTATTACAAGCATTGCACGGCAGTCTACCGAATGGGAAATCTCTTTCA
CCGTCAATTTTCATAGCTTTGGAAAAAACGAATCTGACTGGCATAATATT
TTTATCATCACAAACCACGGTAGCAGGCAATCATATGGTATTCGTTCCCC
ATTAGTCACCACACAAAATTCAATGCTTCAAATCTCATCTGCTGTCAACT
CAAATTATGACCATAAATATCTGAAATACGGGCTGGTCATCAACAAGCCG
TACATGATCAAGATTAGCCAATACTATATTGCAAATGGTCAATATAAATA
CCGAATTGAATTAGATGGCGAAGAAGTACATAACACACTCAACAATGATG
CCAGACAATTTTATGATATGAAGTTCTATCTTTTGCGAACGAATGGTGCA
GATTGTGACGTCTctgatttcaaatttgtaaatttcttaTGAAAACTCTA
AACCTTTAACTAGAGATTATTGCTAAATAGCATACTTTATTGTTAAATAA
GCATACAATTNTATGAAGTTCTATCTTTTGCGAACGAATGGTGCAGATTG
TGACGTCTctgatttcaaatttgtaaatttcttaTGAAAACATTTAACAT
TTAACTGGAAAAGGACGCTGCTGGTTATGTGTAAACTATTATAAGTTTat
cattaaaattaaaattaatagTGTAAATTATTGTAACTTTTTGCCTTGGC
acttatttttgaattttgattcatTACAGGGAATGAGGAGTTTTGTAAAG
ATTTGGCTAGATAAATTTCAAACCTTTAATTTAACCGGTGAGATAATTTA
ATTAGTGATATTCAGTAAGTAAAGTTTTCAACGGAAACATctcggttttt
gccagtagtggcaattCAAGCTAGGGACAATTTGTTTAGAATTTGCAACT
AATGAGGAGAACCAGGGTGTTTCCaaagaaaacattacgtaatgaatatt
ATGAATTAAGTAATCTCACCGGCTGAATCGATAACCGTGTATCCAGTGTC
TACAGTAGaatctcgcttattcgaacttccatcattcgaatctttctata
tttCGATATAATTCCCAATCCccatcaaggagaaa

Gene-mRNA-Prot

The following transcript feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
TCONS_00050988	TCONS_00050988	Clytia hemisphaerica	transcript
TCONS_00050989	TCONS_00050989	Clytia hemisphaerica	transcript
TCONS_00050990	TCONS_00050990	Clytia hemisphaerica	transcript

The following polypeptide feature(s) derives from this gene:


Feature Name	Unique Name	Species	Type
TCONS_00050990-protein	TCONS_00050990-protein	Clytia hemisphaerica	polypeptide

Position

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold_190	supercontig	scaffold_190:34606..41240 +

Expression

Values :

    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.23	0.36	1.01	0.15	0.56	0.64	3.81	1.76	3.37	1.82	6.98	4.92	10.48	5.7	0.31	0.15	0.76	1.7	20.17	12.65	8.02	9	1.98	3.78	6.62	5.41	0.33	0.21	0.04	0.41

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XLOC_032325 (gene) - C. hemisphaerica