XLOC_032337 (gene) - C. hemisphaerica

Overview
NameXLOC_032337
Unique NameXLOC_032337
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_192:16093..26666+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_032337 ID=XLOC_032337|Name=XLOC_032337|organism=Clytia hemisphaerica|type=gene|length=10574bp|location=Sequence derived from alignment at scaffold_192:16093..26666+ (Clytia hemisphaerica)
CACCAGAATAAATTCAGTAGCCGAACTAGACAGTATTCCAATCAAGTAAC CAACATCATATTATAGCTTAAAATCTGGAGAATTGTAAGGTGCTGGCTAG TAACATCTTATTAATATCTCTTCTTTTTACATGTCAGAATGCtgacaaaa aaaggcactttcttgcaaaaatatttacaaaatattgaaatataataatc GTAAGTAAAATTCCTCCAAAAAGATTTAGTATATGAAGGTGATGCTCATT GAATTGATATTAGGAAGAAGTCTTTGATTCTCTCAAAAACGTCTCTTAAA AGCAAATTGGTGCACCGATTGGGGTACcatgctttttaaaataaccTGTT TGCTATTGTTTTatagatatttgaaaaaagtaactATCCTATATTATAAT GGTGTTGCAAGCAATTTTGCGaaatcgaattttttttgtagCACTTCTGG TTTTACTATGGGTTTTGATTTACATGATGCCAACGTTGATGCAAGGATAC AAAGAGGAGAGGTTGGTTATCATTCAAGAATGTTTTATTAAAGCTTGTAA CTCTTGTTCTTTTTATACGTAATTTAATTACAATCACATTTTATGGATTT GTGATAGATTTCTACATAGTACATTGTTATTTTGTTCATAAGATGAAATA TTACGATTTCAATTTTAATGGGCTACTCCacaaatagtctgtacccccca TTTTGaagaggtgtgacgtccagggtggcctggaaaataaaaaaaatcca gggtggtcactAAAATTGGGTTAAAAAaccagggtggtcagtataacgag gtcgaaaatGTGGTcccaaagaaatggaagaaaaaaatccaaggtcctga aaaattggaaaataatcTAGGGGACTcaccttaaaaaaaaaagatctcct caacatagggagtacagattttttctggaatagcccaatttgTAGGTTTG AATTTTATGATAGTAAACACTTAATGAAAGGATCTAGGATGAACTAGACA TCGGTACTATGATATGACTTTAGAGTGGACTTGCACAGACATGGAAGAAC GTTAAATAAAAAGCCTGTTGTTGAATTGAGGAAGGAAGAAATACCAGTCA ATCATCTACAAGCAGGGTTTGTTGGAATTCTATTCTAAAAAACTATCGAA TTATCATGCCCTTTTTAATTGCTGTATTTTTAGGATTTAAGGTTGTATCT TTTAGAATCATTATACAGTATAATATCACATTGTATCCAATCTTAGatac aaattaaaaagaaagtccTTCTGAGccacttgatttttttaattgcaaTC CATTTCCCCTATCGTTTCTATAGTTGGTTTCACCAAGGGGAAATGTGTTT AGATGCAATCAACAGTAAGGAAGATGGGAAGCCAGGCATCTTCAAATGTC ATGATACTGGAGATAAACAGGTATTCTTCCAGTCTACGTTGATGTTTTTT CTCAAGATATAtgatttctttatttaaaaaaattatttttcaggcCTTGA AACAACTAAGATATTCAtggtatgcaccattgcaatgtcttctgacatta cattacggacccaacagctgattggttgtaagtgacgtaaaatcagtcaa tacgtcattttcaaccaatcagttgtTGCGTCCGTGgaaaacattgcaat ggtgctACATATCATGGATAGAGCTGAATTGTTTACATTCTTTGGAGATT AATTCATTACATCAAGATCTATTTTTTACGTTAtaccttttgtttttatt aacaaaatgaattaaataaaaatcaatttactGACATGGTTTCTAAATGA TACCAAGAAAGAGTGCACTTTTTTGTTACATGTGAAAACCGTGTCAAGGT GATTGTACTAAATCCCTTGGGAGTGGTTTCTACATGGAAGCAAGAGTGAG TACAGTTTTTTTTgagtagttttttttttgctcttcTGCAGTTACCTAAA GTTGACTAAAGTCCTAACTTAGTTCTTGAAGGAATAATTTATGTCTATTT GTTGACTCTTAGTTTTGGTTTATCATGAAAGATTCAAATGGGTTGCGGAA CAAACGCTTGTGTGTAGAAGGGCCGAAAGATTTGGGAAAACCAGGAGAAG TGAAACTGCAGAATTGTGATGCTGGAGTAGAAAATcaagtatttattttt aatttagaaTATCTTCATCTCAAAGAAACATCTAAAAATACATTACTTAA AGTTTCATGTTTGTAGCACAATCGTCAGTTTAAAGAACTATCCGTATTCG TTAGAAAAgccaaatatttatttttctcttgccCCTTTTGATGTTACAAC TTCATAAATTATCTTTATTCTATTTTGAAGAGAAACATGAGAGCCATCAG ATGTGtaacaaaaaagttacaaaagaATTAAGTGCTTCTTGTTTTCCGTG CCTTTTCTGGggccgaaaaaaaatctcttggGTAGTTCGTGGATCCAAAA AAGTCGTGGGTGTGCAGGTTCTTGTTTAAGCATCTATAACGTCGGAACAT CGGGTGTTTCCAGTTGTTcatacaaactgatattatcttttaaaaattat cGTGTAATCATAttataacacccatattactgtattgcacgtacacgttt ttttttataagaacaaactatataagaacataaggcttcgaggcccaaaa acttaagaacattctaagaacatactaaggctttggagacttaaaaacat tcAACTTCTTaagaaatcaattcaaaatgctcaaaaaatgctgaaaataa gaatattttaagaacatttttaggcttcaaatccaaaatactaagaacat ctgaaggcttcgaaaatttttgacgttcttataaaaaaaaaacgtgtatt aaaaACAATTCCATGCTAATAAAATTAGTGAATTATTTATACGCTAGAAA TCTATCTACGGTCAATGTGCATTGACTCAAATTAGAATCTTTGAAAGTcc cttttataagaataatttatcttatttttcaGGCTTGGGTGTATGAGAGT GAGAACTTGAAATTATCTGGTGGTGAATTATGTTTGGAATCGagcttgaa aactaaaaaagtcAGAGTTGAGGTTTGTGACagtgaaaagaaaaatcaaa aatggcaGTTGAAAAAACTGGAAGGTATTTAATAAAGGATTGTAACTTCT TGGAAAACATTGTTTGAGAAGTGTTACTTACAATCTTTGAGatgggctgg agtttttacaagagacttcactaattggttatttgaagtaatagagatga cgcgttctttagaaaaagtaacaaaattgttttattacaggttaacgacc aaccaaatcaaacgagagcttgtaaaaactccagcttgtccccaaTCTTT GGATCTTAAATCTGAAACAAAAATCTAATATTGattccaagaagtttttt ttatctttgaatcAGATAATTATATGTCTAAGTTATTTATTTATATACAA AGGCACTAATGTGTTTGTTTGTGTTATCCGTAGATGCTATATATTTTTGT ACTATGGTCAAGAAgacttttatattttatataataTTAGGTTGAGTAAA TGTTTGTTTTCTAACTGAAATGGCTTTGATGGCTCGCAACGAAATTCTgc ccccagctggcacacaacgttgtttcaacgctcatctaacgttatatgga cgttgtgaacattagataaacgttgaaataacgttgtgtgccagctgcaT ATGGCCAACAAAAACAATCTACCGATTCTGtagattatattttttattct gctgagaaactttttgattttttcgaagcTATATGCAATCgtctaattca tgatatgcaccactgcaatgacctcacgaaattatgcaactttctgtttt tgttccacccaaaacgtcactttttctattgtttaagtgacgtatttgGT GGATAATTTcgaaagttctcagaagactctccagtggtgcatatcatgaa tactaatGAAGTATAATGGAAGGTTAGTTGAGCGGATCTCCTACGAAGGA TTTGCTGCAACCTGTTTCCTACCTAAGTTACGCGGCACGTCTTGCTTTGA AACAAATGCTATAGTGAAAATGATACTTTCTGCTGGGTTTTGAAAAACGT AGGCGCACGTCTGAAAAGTTGTGAAACCTTTAGGCATTTCTTGTCAGGAA AAAGTTGAAGGTTCACTTCTAGCCATTTGGTTTATAATTCATTGTATAAT GCcgaattattttgttttcgaTATTTTCTCCTACTgttttcaatatcatt tttggacctaccccggtggggtggaggtcctataaattaacctgtgttcg ttcgttcgttcgttcgttcgtctgttaccaacttttctcaggattgaatc ataggaatcttttgatttttggtccAAAGGTGCGAaacggtggtggccaa aatgtgacggagcccgattttcgaaaaaaaaattttgggggcaaatttgg gccaaaaaacggctaaaaaacgggttttttggactttgtgaaaaattgga tcattaattttttctgattttttgcatgaaagtagggtaccatcataggt aaaagatggctcaattagatttttgcaaaaaaatttatttggcttaaaaa acgcatgtttatctataagaatcactattaataagcatatatcaatcttc ttagtcaaattactcaatttctttatgagatagatgtttttttgctcata agggcttacttttgaagaatatgtgtgtttagacatgaaattttggttgc ttggcgtgtttttatagaaaaactggccaagttcaatatttttttataag cacgttatcaattacttaggtattagcttttctcgagattggctctttca ttctttaagacattttgcacaaagatgcataactataaacccttgaatgt gacggagcccaatttttgaagaaaaaaaaatgttttggggcaaatttggg ccaaaaaacggctaaaaagcgggttttttggactttgtgaaaaattggat tattaatttttgctgattttttgcatggaagtagggtaccatcataggta aaagatggctcagggagatttttgcaaaaaaaatttgttggctcaaaaaa cgcatgtttatctataagaatcactattaataagaatacattaatgttct tagtcaaattactaaatttttttatgagatagatgttttttttgctcacg agggcttaattttgaagcatatgtgtgtttagacatgaaattttggttgc ttggcgtatttttaaagaaaaactgcccaaatttgatatttttttataag cacactatcaattacttaggtattagcttttctcgagattggctctttca ttctttatgatttttttgcacaaagatgcattNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNaaccctcgaatgtgacggagcccgattttcgaaaaaaaatgtttttg ggcaaatttgggccaaaaaacggctaaaaaagggttttttggacattgtg aaatattgcatcgttgtttttttctgattttttgcatgaaagtaggtaaa agatgggtcaagcagatttttgtaaataaacttttcagctctaaaaacgc atctttatctataagaatcactattaataagcatacatcaatgttcttag ccaaattactcaattttttgatgagatagatgtctttttatgctcacgaa gtcttgaatatgaaagaataatttcaagagtatgaaattttggtttctaa acgttttttttataagaaacaaacgactaattttaataaatcttcactat ttgtgttttgaatgattgtttaacgttcatgctcacgtagatatcaatta tatatgtgttaaatgcataaccaggtaggtccataaaagtatcacttgtt ttatttTACCTAGTCGATTTCATATAAAGCctaattttgaataattattc AAATTCATAATATTAGTTGATTTCAGTTATAGAGATTTTAATTTTGAGAA GGTTTTTTTActataatatttttataatgtgacaaatcaaaagaaattta tttaCAATTTATTACAATTATAAATGTATATACCTaattaaaaatagttt ttttacaaaattatgCTATATTATATTAGATTTATGAAATTCGAAACGTT TCATTACTTTAGAACCAAATTTAGATGTCAAGATAATTTATCTTGACTAA AATTCAAACTGAAATCGGTGAATACTTTAAAAGAGTCTTTGATTTTAGTA TTAATTTTAACTTTCATAATCAGTTTGCTTGGCGAGGTCCTATTTTTCGA TTTATGTTCTTACCATTTCTGGCTCTTTTTCCAACCTCAGCTTTTCTACT TCAAACTTTCCCACCGGTTATTGATGTAaacgttttcttttataagaaca tccaaaattgttGAAGCCTTCGTATGTTCTTAAATATTTTAGTTTTAAcc ctaaaaattttctgaacATGTTCTAAATTTggccattttgtgaatatttt agtccattttcctaagaaattgggtgttttagggtccgcaaagtcttaaa ttgttcttaacttgctcttaaaattttggcaatcgaagccttatgttctt atatagtttgctcttataaaaaaatgacgaAGAGTCATTTCAAGCTAACA AATATCTATCTTTTCATTCTagaaacaaagatataaaaccTATGAATTAG AGGTCGGAAATCATGGCAGATTTTCCGGAAATTGAGGATTTGATAGAAGA ATTAACAACAACCGGTAAAGAGGAACTAGACCGAGACCATTTGAAGAAAT TGTTGAACTTATGTCGGAAATCTCATCCCAACCTGGAATTTTCTTACACT AAGCTATATGAGCAATTGCAGGAAGAACATTCTGAGATCCGTTTTTCTGC ATTTCAAATCATGgataaattgtttttaagatcGCATCGGTTCCGTGAAC TCTTACTACAGGACGCACCTGATATTTTGGTTGTTGCTATGGGAACAGAT CAGCATGATCGACCGTTACCACCACCTTTGAAGGTTGCTAAGCAACTACA AAAGATGGCTTTAGAGAAGTTAAACACATGGTATGAACGATTTGGTAAAG GTTACCGGTTACTGGAACTCGCTTTTGAGTTTGTAAGAGATGTGAAGAAa gtaaaatttgatgaaatgcAGGTACGGACAGCGGCTGAGGTAAGAAACAC TCAACAGGCTAAATTGAAAGAAGTGAGGTTAACAGCTTCAAAGCTAGAAC AAGTAGATATACAATATGAAGATCGTAAAGAGAGTTTTCTCTCAGATATC AAACAAATGAAAAGCTGCTTTGAAATGCTGGTGCAAAAATTATCGAACCA GCACACAGATACGGGAGACAGCGAAACGATCCATGATCCGGGATTCCTTG AGGGCAATGAATCTGGCATTACGTCATATAATTTTACGTTGTCTTTGTCG ATTTCTCAAAAGCATGTTATTTACGAAACACCGGATAACGAGGATGCTAT ACGAAGGTTACGCGAACTTTATAAGGAGAATCGGGGTCATGAAAATGAGG CTAAGCGCTGGTTAAACGTATTATTAAAATGCGGGTCAACAGATAAATGG AAGATTGAAGAGATTTTGAGATTGAAGAACACTTTAAGTGGGTTGTGTAG TCAATTTTTGGATCTGGAGATTCGGGAAGATGGTTATTTCAGTTCTGATG ATGATGGAGGAGAAATGTTTGTGGAAGTACCGGAAAAAATGATGAAGACT TATGTTTATTCAGATATTGATGTTGAGGAAAGACCAACTTGCAGTCGATG TGAGTactttcaataaattttattgTATACTGTAGCTAGAAAGTCTCAAC CTGAAAAGTGTGTATGGTTTGGGTTATGTTTCTAGACTCTCCAAAGTTCC TTAGCAGCGACAAGCAATAGTACTTTAAAAGATCCAGGTTATTCTATAAT CAGAAGGTTCTCattgaatttcttttaattAATCAATGTCATCAAATTAA AATagtatcaaattaaaaattttattttcaggcgaaaattaaaaaaatgt agtgtttccggaaaccggccgagtgaaaataaagatttttctgacccggc cgctgACTATGGGTTTATCTAcatggttcatcataaagaaaatcaaattg aCCGTTCAatctatcaaacgtcgtttggttagatattcccacttgtaaat caagtttcgttcgttagtagttgatacattagtattcagggcttagttca tactgtttgtacataaaagtttaaaatcttctatttcaatgatcttaagt tatcaaaaatagcacaaaaagaattttccggcCCGCCGCaagagagcttt tttccttcacccgcattccggaaacacaacatttttttattttcgcctta ggATAAATGAATGCTATACTATCTGTTTTCAGATCTAGAGCCAGACGTAG AAGAAAATATGAAACATGAAGACAAAAGTGAAGCCTCACACCACTCAAGT GTACGTGAAAAACACTTGGCTATTGCACCTGTTGTGCCGTTCGATTCCGA TTTGAAGTTATGGGAAACCGAATCGGGGAACATTGACATAAGCTCATACA AATCGGATTCGTTACATCGCTTTTGGAAAACAAACGAACATCAAGAAAAT TTTGTGCCGTCAGAAGTCGAAGCTAGtatgagagaaagagcttttcGTAT GGAAACCAAATTTGAACCAGTTGAGCGGAAATGCGGCGCTCAATTACCGC AGGGCGGTGTTTGTCAGCGTATGGATCGATACAAGTGTCCGTTTCACGGA AAGATAGTTGAACGTGACTCCGTAGGGCGAGCTCTTCATCCTGAAGACAT TGAACGGGTATGAGATGTGATTCCAGTAATACACTTGGTTTATACTAGAC ATCACGGCTCTTGTTTTCTACGTAGTAACCACAGCAAAAGATGAGCAGAT CACCCGGTTGGGAAAAGAGCATTTCACTCCTTGGAACTTACAAGAAAGTC CCACAATCATTCGCACCAAGATGTGAAATTATTTTTCCCATTCAAATGAT TTGTTCAATTTTTCCTGcgaacgtctattccactttgcgactttttcgaa tatctatagcccaggttttcgggtgTAATTCAAAGTGTAACTCACACCAA GAAGCGGAATGAAAGTTGTCTGTGTGTCAGCCCAATGAAACCAGCCATTG ACGTCATTCAACTCTAGTTTACTTAAACCCAGCTTCCTTCACTTACCTTT TGGTGCAAGGGTTGGGTCATTCCATATATTATATCCATACGATGGAGTGG GACGCACATGGGGGATGTAAATgcgtaaagaattatttttaaattttcca ggTGGTAAAAGACTGATGTTAgctcgtccaccctcacttttaaaatatga aaataatttttctttccaagGGGTATCAACACATTTTcaagaaatgtttt tgattttaaaaggttcgtccacgccctgtattaccgagtttatatattgg aggatatcgagggcgacggtaagtgaaatgatacaaaacaaagtcgatag ttgatgtacggctctatattgcctttgctcacctaaacagacgacggtat tttagtgtttttaccatcgtcgagcaaagtggacggtgattttggagaca ggtcaactttgctttataccgtcctctagtctgaatcgcagacctctaca aaaccccaggtagtatatcTATAAgaagcacgaatccgttagtggatgcc agcagcctaaccGTCCTCTCGATTTATCTCGAgcacataaactcgctatt aaaatttgatgaaatggCCCATTGAAGCCAAGTTTCTCCTATAAGATGAT CGGTTTTCGGTGATATTCGTCTGTTACAGACCGTAAGATCCAAATCACAA ACGATAGCGGGCTACAGATATGAGCTTTCCTTCCTATCTCTTTTTTTCTG TAGGATAAACAATTAGATGTGcaacgaaaagaaaaagaatgtcttcaaat tcaaaaggaTATCGAGGCAACTACTGGTGTTTCACTTATCAAGAAAAAGA GACCACGAGTAAGCAAGGCACAAACacgaaaagatattcaaaagaaACGA TATGCTCGCTTAACCAACATCAAGAAAACTGGTGACAATGAAGTTACCTC GAAANAAAGAGACCACGAGTAAGCAAGGCACAAACacgaaaagatattca aaagaaACGATATGCTCGCTTAACCAACATCAAGAAAACTGGTGACAATG AGGTTACCTCGAAGAAAGGATTGAAAAATAAAGTGTTTAGTGCACGGAGC TTAGATAAAATTTCACATGCTAAGAACCAATCATCTCAACGAAAGCATCA GGAACGATTTGGGTCAAAttttaattattgaataatTTGGTTTGTTATTA CTGTTGATCAGATGAAAGTTATTTTGAACCAAGATTTGTCTTGTGCTACC TTAAAGTTGGGTGTAAAGAGCTGTCGTAAATAATTTGCGATGGATAAATT TCTTGTCGCAAACTCTTTGTCCCA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00051005TCONS_00051005Clytia hemisphaericatranscript
TCONS_00051006TCONS_00051006Clytia hemisphaericatranscript
TCONS_00051007TCONS_00051007Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00051007-proteinTCONS_00051007-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_192supercontigscaffold_192:16093..26666 +
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
UVSSAPREDICTED: UV-stimulated scaffold protein A isoform X2 Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
2.9 3.13 3.7 4.33 11.36 8.5 10.5 10.52 6.24 6.16 7.78 6.58 7.78 7.19 6.79 8.06 9.27 11.24 8.49 8.57 11.48 11.82 9.52 9.3 9.68 10.89 11.81 9.58 16.35 14.6