XLOC_032557 (gene) - C. hemisphaerica

Overview
NameXLOC_032557
Unique NameXLOC_032557
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_201:151459..155656+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_032557 ID=XLOC_032557|Name=XLOC_032557|organism=Clytia hemisphaerica|type=gene|length=4198bp|location=Sequence derived from alignment at scaffold_201:151459..155656+ (Clytia hemisphaerica)
CGCTCAACGAAAAACACGTGGTGGTTTTTGGTACGACAATTGCGGTAACT
TTTTTCCTAATGGTGTTTACTATGAAGAAAGTGATTCGTTTAAACCTGAC
CCTTATTTGTATCATGGCATTAGATATGCAAATTGGAACCGTCTTTATAC
TTTGAAATCAGTTGAAAtgatgatcaaaagaaaagagTAGCGCATGACTG
GGTGGCTTGAGAGAACTTTGGAATTCTGGACTTAACATGacgattttttt
ctaaacaactTTATTGTAGATCCTTTCGGAGAGGCAGAAATGCCTGCGAA
GGGGAAttcataaaatatttaaataaattaTTTGCAGAACCCCATATTCC
GATTTTTTAAAAGTTCCGTAACTTAAGTAAAAGCGGCCATTAtatggaaa
aattcaaatttgtaCAAACGATTCCTTATGCAAATccaacgtttgcttcc
ataatttTAAGAAACCTCGACTTTTCATCGACAAACTTGATCGAGAAATA
AAACTGATGGCTCAGCAAAGGTCTGGTTGCCAAGGGAgaagggggtactt
aggcaaacggagggtacggtatgttcCACCCTTAAGGGCacattttttgg
atttccaaagtcccactaaggTCGGGGAAAtcacaaaatcaaatttcagt
cccactaagggtcggataaataggaaaatttcatctttttacCCCTgtaa
agatcgaaatttggtcaaaattggtcatatTTGTCCCGATAAGGGTcgta
attcaaaaattttttctttgttttctctatTTTAGTCCCATTAAGGGTCC
AAGgtggtcgaaagtcgggcggcaccccccccccccNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NcccccccccccccccggcagctcgcaaccctagtacccccgggtaCTGA
TGagtctcaaaaaaaaaacttttatcatGAACAGCGtaaataaacatatt
tttataagtcttcaaaacaatggaaatggaaagaatagtataatattttg
tagtgaggattggtttaatTGGCTGTTTTCAGTAGGGGAAAAAATTGAAG
GCTAATTTCCCATGCTACCAGGGACGATAATTTGGCCAATTTGTCAGTGA
GAGGGGGTGTTTAATTTATGACCAAAAActctcaatttttttcttgtaca
cgctttttttttttataagaataNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNgaataccgtaagaatatttttggatgattttcgcca
aaaagttaagaatatccatgatgaaatgaaaaacaccattcttataaaaa
aaaaagcgtgtagttgtAAATCTTTAATTAGCTTTCATCTCAACAACTTA
TTTTTCCCAAGCAGTTTAAATATTAGGCGAAATTTTCTACTTAAATTCGT
CTTGTTAATTATTCAATGACTTATTCATATAAGTTGTCATCGAGTTAGTT
GCATCAGCCATAACCATAACCCAGCAACTGGAAGAGAATAAAGTAAGCTG
ATAATGAAACAAGCattgaaatgaatttgaatttgtcaTTTGTTTCTCTC
Aataataaatctaaaattaagtttttaatttgtttttcttcttcattttc
gcaAGGAACATTTAATAAAGTTTCTTGATTTGACCAGTCTAGTTTTGAAG
AAAGTTCGTACACAAAAAAATGGTAAGTTTGAACTTGGACATTATCAGTC
AGAACCACTATatagaaatggcaactattgccttaacgggaaggtgaaaa
acttcccgaaatggaTAGAGTTTCCGAATCAGGAAGTTAACCAGTTATTC
CCGATCGGGAATGTGACCTCTGCGCTCTCCGGAAAAGGTCGTGGAAGGTA
AATAGCTGATGCctattgtaaaagagggtgaatAAATACCTTTCACCGGG
TAGTTAAGAAATCTACTGGGTAATcgcttcttaattctactttccccatt
cccaattaaaaacttccctatttggaaactttttctcgatcgaggagaaa
caaaaatttgctttgtttacaaaattatatttcccGTTTGGGAacgatga
aaagttcttgaccaaaacgggaaacaaaaaagtgatgaaattttcaatct
ggaaaaagtttccttttcgggttattttcaccttcccgtttgggaaatat
ttcccgttaaggcaatagttgccatttccatgtagtggttccgactgATT
ATTAAAATAAGATAATGTACTTTCGAAGTTTTGATCTGTTAAATTACTtc
caaaatttaatttattcacAAAAAGTGGCAATAATACTCTAACGCTTTCA
AgtctaaatttttttcaataatcttAACTACAATATAGAATCTCCATAAA
TAGAATACAAGTTTTAACTAGGAGTGCATCAGCTTTTGAGGAGCTGGTAA
CTAAAATACAAGGTTAAAACGATAAGATATTTCATCATATTTCCAGGATg
gaaacatcatattttcaaaatatttctaaattttggaaatatcatatttc
taaAAGTTGGAAAtactttgaaaatatgatatttaaaTGAATTACATATA
AtacaaatatataaaatatagaaaagtcatatttacATATTTTTCGCACA
GTGCTGCTCTTCTGTACTTGCATTCTTCCTTTTATAAAATTCCAGGAAAA
TATTGGATCAAAGATCTTTTACTCGAGTTTGATTCTCATTGCTGTTGGGT
CAGTTTCAACCAAAAATCTCATCCTCGTTGGCAAGAATCAAAAAACATTG
TTAACGCATTATACTGAATTTCACACACccaaaatccaacattgtttCTC
GAAGTGTCATTACGATAAATCATGTTACTCTTTGGAGGTTGTACAGACTA
CATTATACCATTGCAAGTTCCATAACCAGTTCATTAAGCGATCAAACCGA
ACAACAGAATCGAACACAAATATCTACTCAGAGATACGAAGTTGTGACGA
TCTCTTCGATATTGGTATAAGGAATGCAGGTGCttatgaaatgaatttta
tgggTGAAGGCAAAAAAATGATCCGATGTTATTTTGATGAAGATGGTGGC
TGGCTAGTGTTTCAACGAAAAGTTGATGCTTCAGTGAATTTCAACATTGG
ATGGGATTTCTATAAAAATGGTTTTGGTGACCCAAGAGGTTAGTTTTGTA
CTTTTCTCAcgactttctttttttcaaagttcagacagacagacagacag
acagaccaACTATGCTAATAAATAAACTGGTTGTATTCTTTCTGTTAGGG
AGCTTCTGGCTGGGTAACGATCTGATTCACGAAGTGACCAGCCAAGCACA
ACATCAAATCAGAATCGTTCTGACCACTTTTACTGGAGGTGTTAGTATTT
CAAAATATGATCACTTCGAAGTCGCAAGTGAGGCAATGAAATATCAGCTA
ACAGCAACTAATTTCAGTCAGGGGTTCGATTTATTCAAAAGCTGCGATGG
TATGTTTTTCAGTACAACAGATCGCGACAATGATATAATTGCTAAAAATT
GCGCTAAATTAAAAACACGAGGTGGTTTTTGGTACTCAAAATGCGGTGAC
TTTTTTCCTAATGGTATTTACTATGAAGAAACTGATTCGTTTAAACCTGA
CCCTTATTTGTATCATGGCATTAGATATACGAAATGGAACCGTCTTTATA
CTTTGAAATCAGTTGAAAtgatgatcaaaagaaaagagTAGCGTATGACT
TGGGTAGCTTGAAGCCCGGggccacttatagctttttgTTAGTCTGATGG
CGTTGATAAGCGGCCGGTGTAGTTGGACCGATTcgattttttggctttgc
ttgaggtggcAGCAAATCCATAGtactagatccagtccctttttggag
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00051377TCONS_00051377Clytia hemisphaericatranscript
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_201supercontigscaffold_201:151459..155656 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0.25	0	0.57	0	0	0	0	0	0	0	0	1.2	2.31	1.9	0.78	0.39	0	4.65	6.29	0.25	0	0.59	0.27	0.28	0.49	0	0	0	0