XLOC_032570 (gene) - C. hemisphaerica

Overview
NameXLOC_032570
Unique NameXLOC_032570
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_201:30140..34527-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_032570 ID=XLOC_032570|Name=XLOC_032570|organism=Clytia hemisphaerica|type=gene|length=4388bp|location=Sequence derived from alignment at scaffold_201:30140..34527- (Clytia hemisphaerica)
AGTGTGATGAATCCTGTGAAAGTGCTTCCAGTAGCACAACTCTCAATCTC
AAACAATTCCAAGCAGCCAAAACTAAACAACGCACAGAACTGATTTCAAA
AAAGAACAATAACAAACAATCTAAACAATCTACTTCAACAAAATCAATAA
AGGAGACAACTGATAAAGTGACCATTAAAGTTGGGCTAATGATCAGAGAC
AAAGGTGTCCTCAAAAAACAAAGAGGGAATTGGGCCAATTTATCCGCTCG
GGTAAGTTATGGCATGTCTTAAAATTACCATAATTTTTAGATCGCATTAG
CCGGCAGAAAACGACCAAACAAATGACTGAACATAAAGGGTACTATGATG
TAGTTTCTAACCTGATGTTTTTCGCTGATTTTCGTGAAAAACCGTAAAAA
CTGATTATAACGTCATAATCGATGACGTCATAAAAACTAAAAATTGAATT
TCTCAAGGGTTTTTTATCCAATCGTCTTCAAACTTTAACCAAAGATGTAT
CTGACTAAAGTCGATCATTTGAAAAAAAATTTTTTTCGAAATTCTGATTA
CGTCAGCAAAAAATAGGATTTTTCCTTTTTTCCTAATTTCTGCTGACGTC
ATTAAAAATTTTGAAAAATTTCTTTTTCCAAATGATCGACTTTAATGAGA
TACATCTTTGGTGAAAGTTTGAAGACAATTGGATAAAAAAAATAAAAATC
CTTGAGAAATTCAATTTTTAGTTTTTATGACGTCATCGATTATGACGTTA
TAATCAGTTTTTACGGTTTTTCACGAAAATCAGCGAAAAAACAATTAGGT
TACACATCAGGTTAGAAACTACATCATAGTACCCTTCATGTTCAGTCATT
TGTTTGGTCATTTTCTGTCGACTAATGCGATCTAAAAATTATGGTAATTT
TCAGTTTTTTAGACATGCCATAACTTACCCGAGCGGTTTTATCCGTAAGT
TATGGAAGCCGAGAAAGGTCATCTGGCGATTTCTTTCAAAATATGTCGAG
ATTTCTTTCAAACTGTCGAGAATTCTTTCAAACTGTCGAGAATTCTTTCA
AACTGTCGAGAATTCTTTCAAACTATCGAGAATTCTTTCAAACTATCGAG
ATTTCTTTCAAACTGTCGAGAATTCTTTCAAACTGTCGAGATCTCCTTTG
AACTGTCGAGCTTCCAATAAGTGTCCCGTTCCCAAAAGAATCGCGATTTC
ATTTTTTTCCAGAAAAAAATGTAGAGATTCCTTCATCAAAACCGCGGGAA
CATAAACTAAACGCAGGACATGGGTATCACCTCCACACGCGAAAAAGAAA
AATAGGGAGCACCAATCCAGTCGGAGTTAACTGTAAACTACTCCGAAGAT
AATGGCTTTATTATCGGACCTGACTGCTGATCAAAAATTTCCAAATCATA
TCGTTTTTGGTTGGAAAGATATCTAAGTTTGTAGATTTAAAAATATTTAA
CCTTTTCTTCTTTACAACTTGGGGTCCCTTTTTAAAAATACTGACGTCAT
CAAATTTAGAAGGACTGTCGAAAAATTTTGGAAAATGAAATTAAGTAAAA
GTTTTCAAAGTAGTAGCATAAATTGGAAAACTTCCAGAAAAAAAATGTTT
TAGGGGTGATGCATCGTTAAAGAAAAGCTTGGCACGTGGACTTTTCACAA
GTGGATAATAATAGGGTGATTCCCCCAGCGTAATGCTCGACGCTTTTTTG
GAAGCTCGACAGTTTGAAAGAATTCTCGACAGTTTGAAAAAAATCTGGAC
ACTTTTTGGAAGCTCGACAGTTTGAAAGAAATCTCGACAGTTTGAAAGAA
ATCTCGACAGTTTGAAAGAATTCTCGACAGTTTAAAAGAATTCTTGACAG
TTTGAAAGAATTCTCGACAGTTTGAAAGAAATCTCGACAACTTGAAAGAA
ATCTCGACATATTTTGAAAGAATTCGCCAGATGACCTTTCTCGGCTTCCA
TAGTAAGTCGTTCAGATTCAGCTGATATTGTTTTCAAACTAGCTCTATTT
CTAGTTCTATTAAGTGATCACATAATACGCTAACGTACATTATCATGATA
TTGAAAATAAAAAGTTATTAAAAATACCTAATAAAATGAAAACAACTANN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNTATTCATCCAAAAAAAATCTTATA
AAAGTCGCTAAAGCATTTTTTTACCCAGGGTCGGCTTTTTATTGTATTTT
GGTCGAGGGTCGGCTTTTTTCCAAGGTCGAGGTCAGCCTTTTTCAAGGGT
CAGGGTCGAGGTCGAGGTCGGGTTAATGGAGATTGCCGGTTAGGGCATTG
GTTTCGAAACCTATAGGTTCCCGGTTCGAGACCCCCTTTGGTCACTATTC
AACTTGAAAAAAATTCTAAGTCCAGCCGGATGCATCTGAAGCTTTTAGCC
AAATGTGAAAGAGATGAAGTGTAAGCAGTGTCAGTCAATGGTGCCTGACA
AGCGCTTTTGTGGTTCTTGTGGACATGGATTGTTGAAGTATTGTATGGAT
TGTGGGAATAAAGGAAAGTGTGATGAATCCTGTGAAAGTGCTTCCAGTAG
CACAACTCTCAATCTCAAACAATTCCAAGCAGCCAAAACTAAACCACGCA
CAGAACTGATTTCAAAAAAGAACAATAACAAACAATCCAAACAATCTACT
TCAACAAAATCAATAAAGGAGACAACTGATAAAGTGACCATTAAAGTTGG
GCTAATGATCAGAGACAAAGGTGTCCTCAAAAAACAAAGAGGGAATTGGG
CCAATTTATCCGGTTTTATCCGTAAGTCGTTCAGATTCAGCTGATATTGT
TTTCAAACTAGCTCTATTTCTAGTTCTATTAAGTGATCACATAATACGCT
AACGTACATTATCATGATATAAAAAGTTATTAAAAATACCTAATAAAATG
AAAACAACTAAAGCTAAAAGTGGCTGCAAGAAGAAGTAGTGAGATAGCGA
AGTAGCGAGATATGACTGAAGCTGAAAGACACCACCACAAGGGTTTAGAA
TAGTATGTAGTAAGCGAGAGGCTAAGATGTTATAATGTAGACCTGAAAGA
CTTGTGATTTGATGAAGTTAATAAGATATAAAATATACATTTAAATTTTT
ATATAATATATAAATATGATTACTTAAAATTAAATATTATGATTAGTATA
TGTTTAATATAAGCTAAAAAGAAAGTAGAAACATTAATAGTGAATAAATA
CTATAGCTAATAAATAAATAGCTATAGAGAAGCACTCATCTCTAGACCAA
TACTTCTGTGGAAGTGATGACTACCTTCTTTTGTATCCTGACGAAAAAAT
TGTTGACAAAATACCATCATCTGAAGAAACTTTTACTCTCAAAAAGTATA
AAGAATTTTTCAAGGAACCGTCGTATGAAAGGGTAAAACTATACTTATGC
CTTGAGGTAGACTTCATGAGTGATAACGTATCTTGAAAAACAAGAAGACA
AGAAAATAGATGATTATTTTAATTCCAACGCTGCAGGCAAGGCTTCAGAT
TCAGATGATGAGAATATTGAGAATATCACGATTGTTCCCAAAAGAATTGA
AGTTAAAGATGATGTGGTTGTCATAAATGCTGATGCAGAGGCGAAAACAA
ACCTCACTGAAAAAAATTATCCATGTCCTACTTGTAGAACANGCTGATGC
ATAGGCGAAAACAGACCTCACTGAAAAAAATTATCCATGTCCTACTTGTA
GAACACTATTTTCATTAATGGATATAGAAACACATGCTGATGAGTGTGCC
AATAATGCCCCACACATGCCCATAATAATTGATGATGA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00051397TCONS_00051397Clytia hemisphaericatranscript
TCONS_00051396TCONS_00051396Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00051396-proteinTCONS_00051396-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_201supercontigscaffold_201:30140..34527 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0	3.92	2.7	2.04	0.5	5.83	2.86	4.55	4.71	3.15	4.04	0	0	0	0	0	0	0	0	0	0	0.49	2.18	0	0	0	0