XLOC_032660 (gene) - C. hemisphaerica

Overview
NameXLOC_032660
Unique NameXLOC_032660
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_202:1051879..1056051+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_032660 ID=XLOC_032660|Name=XLOC_032660|organism=Clytia hemisphaerica|type=gene|length=4173bp|location=Sequence derived from alignment at scaffold_202:1051879..1056051+ (Clytia hemisphaerica)
caaaaatggtagacgccgttcaaaaaaataccaaaccaagaaacattact
tttttaacttttggaataaataatatctttctgaaaatttacttttttta
tgtttcctggtaaattttattttatttttaaaacttttctttgagATCAA
TTGAGGTTTTTTTTGTTGCAATTGATGCAAAGATGAGATTTTTACTTTGG
TATTTCGTTCTTGTTGTTTTGGTCATCAAACATGATATTAATTGtaagta
ttttcaaaattataaaacGTTCTCATTCTACAAGTCATTTTCTAGATGAA
TTCTTTGATGCTCCATAGCCGTTCAATGTACTAATAAGCCTTCTAGTTTT
TGTAAATAACTATCGATCGATAACTTTCCttagacccccccccctaatac
CGTGCCGCTGCCTCAAGCCCTACCTCGGGGGGGGGGGNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAATTTATGCGATtattca
tgcatatattatgacgtaaaagagaaaataacaataggagacgaagtaag
gatatgtgacgaagtagtgctatgcacaggggggcgtacggggtttgcga
tttccgaaataccgaataatttagccaaaatttccgagattccgtaaaaa
aatacttgcaattccgataccgaatttttcctcgttttgactaattttcc
attaaatttgatttttcatgtatgaattccgaaaaagggggataaaaact
ttataataccgaaatttcgaagcaaaaattcatggatttccgatactgaa
agaatttcagaattccgaaataccgaaggaattttccccgatttccgaaa
ttccgaagaaaaaagggtcgatttccgcaattccgaaataccgtacgccc
cccactacCTCCTAGGGAATTTTTATCCTCCTCTCTTTCCTTATCTTGTT
ACCAATCTTACGATTATTCGGGACTCTCTCTCTCATTAAATTATTTAATC
AATACTTAATAGGCAAACATCATCGATCAAGACAGTCAAAGAAATCAATC
ATTCCCAAATCACCAAAAATCACTCACCAACAACAATCATCACACTTTTC
ACATAATCTTCCATGGAAAGAGATCTCTAAAAAATCGTTGATCGATTCAA
ATCCTTCAGAGGATACCGAAACAATGCAAAAACAAAAGAGAGGTATTGTA
TTTTTTCTCGCTTTATTAATTTTGTATTACCTTTCCTTTCAATAGATCTT
TATCCGTAGATATTATATTCTTTTGCACACTAAAAAGCCAGTTTTGAAGT
CGACTTTTCTGTCATGTCTGGTCATGTTTGTCTCTTTTTTACCTTAGATT
GTCGAACGTTTGTATATAAACATTCGAATCCCGTAGTTCATCAACAGAAT
AGAATAGAAAGGTAGAATAGTCGGTTCAAAATAAGCTAGAAACGATTCCG
TTATTTTAAGAAGCCCAGTTCATTAAAGTAGTTGGAGATTAGTGCTTTTG
TCCCTATCTTCAAGTTTTAATCTCTAGCCAAGAGCATTTTTAGGGAGATT
GAAATGCTCAAATATTTGAACTATATTTTCTTTATGTTTCAGGTTTTCTT
GCGAATCTGGCTAATTTACTAAACGATGCTGAGTCAATCTCATCTCATAA
GGAAACTGAGACAAAAGTACCAAGTATCGATGAGGCTCACGAAAAGAAGG
CTGTCGTAGAAAGCCACGAAGAAACCCCAATATCAAAACCTAAACACGAA
GAAAATAGCGATAAGAAAGATGTGATCGATCTATCGGCACTTAAAGACTC
TATCAAAGCAGATTCTTCTGATTTTGCACCAATCTTTGCCATGTATCATG
GTAAAGTTGTTGAGCTTGGTAAATTACCAGAAAGCTCTTTTAAGAAGAGT
CATCAAACTTCAGATGTTACTTTGCCAGAACATCATGCGAAAGACGTCAC
AGCTTCAAAACGTGTCTTGGATGAGACGACAAGTCACAAAATGGACGTCA
CTCCCGTCAAACGTGAATACCATTCATCGACTCCAGATCAACTGAAAACT
TACCTCAATACCATGGCTGGTGGTTCAGATCAACAGAACAGCATTACCAA
AGATACAATATCAATACCCAACTTAGAATCTGGAATTAAGGGAGATTTAA
TCAACCATGTCAAAGGAGTCGTGTTAGATGATGGTAAAGTCGTATCTGTC
AGCAATAATCATTTATTTGATAACAATAATGATGTCTCTAAAGTACAATC
AGACCCAGTGCAACAAGATGTCCAACAGAAGTTCATGGTTAATAAAGAAG
GCAATGTGGAACCATTGGTTAAAGAAAAAGTGGAAACTGCCGATGCTGTA
ACCAGGGATAACTTAGGGAATGGTCAGAAAACTGTGACACTGACTGTTGA
TGTTTTGAAGCAACTATTGAAGAAAACAGGAGATTCAAAAGTTTCTTTGG
CACAATTGCTGAATAAACCAAACGAAGCTGAGCAAAGAAGCAATACTCAA
GAAGATGAAGACCCAGGTCCGTTATCGTGTTTTGATTTCTAGTAGAAAAC
GAAATTAAACATTCTTATTATAAGATACATCATAAGATAACttagccaaa
atttcgtcccgttGAGAAGAAACATACCCTataattttacccccactgcg
aaattgactttttattcTCATTTGAAGTTCAATGGAAAAGAAAACCCTcg
aaaccatccccactgggttttttaaaGCTTGGAATTGTAACAATAAAGTT
TCTTTCCACATTCGGATTTcggtagaaattttcatcccaactgtgggaaa
aagttccaccagcACTGAGAAAAGGTGTAAAATGTTTTTACAATCTCCGT
CATGTTTTGGATTTATGAAACGCCCCttatttactcaaaatttaattGAT
GTAATCAATGTTTAGCGTTAGCGTTTTTTAATAAATCTTATCATTACTTT
TCCTTTCAGGCACCATTGAAGATTTTGCTGCTGGTGGATTGAAAGCACAC
AACGAATACCGTAGCAAGCATCATGATGACAATGTGATCTGGTCAGACTC
ACTAGCTGCGAAAGCACAAAAGCTAGCTGAAGCTTTAGCTGATAAAAAAT
CATTAGAAATTGCCAAAGATCTTGAAAAAGAAGGGATGGGAGAAAACGTA
GCCAAGGTTTGGGCGACTTTTAAAAATGCTGGTGAAGCAGCAACTAAAAT
GTGGTATAGCCAGAGTGAAAACTACCATTTTGATGATCCGCATTTAGACG
AAAATACAGGGCAATTTGCACAGGTTGTTTGGAAATCAACCAAAGAACTT
GGCATGGGTGTAGCTAAAAGTATTGATGATGTGAACAATAAATATGTTTA
TGTAACAGCTTTGTATAGTCCTCCAGGAAATATTGAAGCTGTGTTGAGAG
ACAATGTTTTACCTACTGGTAATAACACACAAGATGTTTattcaactttc
tttaaaaggACTGGTGTTATAAACCATGAGCCTGCTGTTGTTCGAAGGTC
AAGGCTACCAAAGAGTAAGAAAGCGAAAAAGATTGTTGCACCTTGAAGAT
TATAAGCTTTGATTTTAAACTATCGACCACATAATCCTTTGAGAGGGTAA
GAAGGAGTACAGAGGGACACTGATTACACTTCTAATCTCTGAATTATTCC
ATGAGGACTTTCACTTATGAACGATAAAATTATTACACATTTGGAACTCA
GAGTACTCTGTGGGAATACTGTTTATTTGCCAAATAAAAGGAACACTGAT
TATATTCCAGTCGTAAATGGAGACTGATTTCTTTGCTTTATTTGATGGAT
TAATTGAATTAAACAGATGAACAATTATATGTTTATTATGATTTGATGTA
GCTGTGTTTCAGCTACAAAAACAGTTAAGGATACTCCTAGCCATTAACAG
TGACTTTGATGTCAATCTATTtatcataaattttcaaaaagacaaaggag
gattaaagaaaaatattgattaaGGATGTTTATTtatacaatcgaatgtt
ttattTGTGGTAATAATACTACAATTTTAATCACTTAATGTTCAGGCAGT
GAGTCCTAACAGGCAATTTTCTTGTTATGCTATTTTTGTGCAGTTTCAGC
TCATCATAAGTCCAATCAAAAGCTCCAAATCTGGCTAAAATCATAGTTTA
TTTTAAGCATAGCGATATCAGTG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00051552TCONS_00051552Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00051552-proteinTCONS_00051552-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_202supercontigscaffold_202:1051879..1056051 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.51	0.32	0.39	0.3	0.85	0.51	9.75	11.29	4.37	2.9	4.62	4.67	11.07	9.54	7.17	17.8	9.07	8.87	0.27	0.23	7.19	5.72	4.6	5.72	6.53	10.57	1.51	0.46	0.57	0.61