XLOC_032663 (gene) - C. hemisphaerica

Overview
NameXLOC_032663
Unique NameXLOC_032663
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_202:1102636..1106388+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_032663 ID=XLOC_032663|Name=XLOC_032663|organism=Clytia hemisphaerica|type=gene|length=3753bp|location=Sequence derived from alignment at scaffold_202:1102636..1106388+ (Clytia hemisphaerica)
AGTGAATTTATTTACGGTTCCGAAAGACATGTCAAGAGAAagtcgttctg
taaattactaatttgaaagatttttgcgtGCTAATAAAAATGGTAGCTAT
TTCCGAACTCATCACACATCTTTCAAGCTCTCTAGTATACGTGGGAGAAA
TAAGATCAAATATTAAGTTATTTTTGGAGTAATAACACAGAAGCGGTCAA
GTTATTCTGTATCACAATGCACAGACTGACAGATGGGTGCGGAAAAACAT
TGGTTGTAAACAACATCGATGGAAGTAAATCAAGTTTTGCCCACAATTTT
TATCAACGAAGATTAAAGGTTCACTCTCGACATCTTAAAGAGAAACCAGC
AAGTTAGCCAAACCCTGGCAAATCCGATCGATCAGCATGATCAAGATCCT
ACATATCAATTACTGCTACCAATGGACCAAAAATGGATTCCCTCGATCAA
AAGAGAAAACAAGAGACAAACAAGGAATTGCAAGCTAAGTATTTCTGATT
CTTCTTATTTTCGTTATATAACTGAGCGTTCTCTTGCATAGACAATATCA
ACAAAGTTTGTGTTAGGAGATATAGCTCTCTTGGAAAAACTCATAATAAC
AAAAACTCTACAgggaagatttttttttgtcatctaaATCAATCTCGAAT
GCCTTGTAGGAACTTATGTTCTTGCNTTAGGAGATATAGCTCTCTTGGAA
AAACTCATAATAACAAAAACTCTACAgggaagatttttttttgtcatcta
aATCAATCTCAAATGCCTTGTAGGAACTTATGTTCTTGCAGGAAATCAGT
CATCAGTGTTAAACTTAATGGGGATTTCTTTTATCAAAGTTGTTTTGCAT
TGTGACAAGGAAATATAATAGTGACATTTTAAATAATGATGTCAGAAATT
TATGGCCTCGTTAATAAGGAGATACAATTATTAGCAAACTGCTTTTACAC
TTCGAGCTTTTGAATTCAAATTAACAAAGGAACAGTGTGCTCTCTCGTAC
ATAGATAATATGGCATCACCAAGAATTGGTAAGGTAGAAGCAATAAGAAA
AGGTACAATATCTGGCAAACCTCGTTTACaagaaatataacttttgaGAA
TAACATGGATTGCTAGAAAGCTTAaaaggaatttaattttttttttcttc
atatttttggaaataccTAAATCACGTCATTTGTTtacagaaaatcaaat
ttattttaatgCAATGCGTACGTTGTTAGGGGAATAAGTCGAGCCGTCTG
TTTGACGTTAAAGTGTtcagaaagaaattggaaaaGTTCTTGCTTTTCTT
GATAGGAGTGTAGCCATAACTTTCTATCCATAAATGGTTTAACCAAGAGA
CAGATATcattaaaaagccatttttgaGGGAGCAAAACTATGTTTGAACT
TTCCCAAAGAAGTGAGTGAAAATGAGTTTAGagtcgatttaaaaaaaaaa
gaaaaaaaaaaaaaaaaattttaatggaATAGgctgaaaacctcaaattt
aGTCCACGAAAAACTGAACCCTTCCTGAAATCAAAAGTGATTTTacgatc
ttcaaaattttttctcgTTTGCGAAATATCAAGCTTTAAAGTCGATGTTT
TAAGGTTTATCAcagtttatcaagagttattgatttgattcttataaagt
aggtgCTTTTAATAAATCAGATATGCTGACATTGTGCACAattatttatt
aatttgatGTTCGATCACGTTAGTTTTTAGCGATATTCTTTACAATATTA
GAGAATGATTAAATGTTTATTACACCGTGTCAACCACTAAATTTTATTCC
GTACCGCCAAAGCCagtatcgtaatactttcgctaggcggcgaaattaaa
aatagaCAGATTGGACAAAAGTATATACCGAAGTAAACTCGTTGCCTTCT
AAAGAAAAGCATGTAACTTTCATTCTAATGTTTCAATTTGAATCTGGGAA
GTCCTTTCCGGTGTATGAAGCCTTACGAACTATTTATCATCCTATTTCGG
GTTACGCGATCGGGTCATTTTCAACTGTAAGGCACTATTCGAGGGTTTTT
TAATGCTCCCCGTCTTCTACCCCCAAAAGGATTAAGGGTTTAGAGgtgaa
gatttgaagaaaaattttttgaaaaattatcagTGTATATTCTCTAATAA
CCTAAatgccaaaagtttcaaagattttgcgtaaaatactttttttttct
tgattatttCCATTTTAATCTAAAGTGGTAGACGGATGTCTGACAGGGAA
GGCCATTAGGTAAATGTTGTAAGGATGTATTCTGATATCTGCCTGGTTAA
GGGGCTAGAAAGGAATCTCCAAATGGCAAAgatggaaattcttttttttt
tttctaatttttagaTGGACTACAAAATCAAAGCGTAATCAGATGTTAAG
ACGTTGAAAAATCGAAATCATACAGCTCCGTTAGAGACGACACAAAGAAA
GTGTTTGATAAAACGAGAAAAGGATGTGTTGTTCACAATTTGAGGTCAGG
TGGTGCTTCAGCTGCGGGTAATCCTGGAGTGTCGTNAagtcgttctgtaa
attactaatttgaaagatttttgcgtGCTAATAAAAATGGTAGCTATTTC
CGAACTCATCACACGTCTTTCAAGCTCTCTAGTATATTCTCTAGTATATT
TTATGCTGTGAGGGTGCAGcaagagtaatatattttatgctgTGAGGGTG
CAGCAAGAGTAATGTATTTTATGCCGTGAGGGTGCGGcaagagtaatata
ttttatgctgtgagggtgcagcaagagtaatatattttatgccgTGAGAG
TACGGcaagagtaatatattttatgccgTGAGGGTACGGCAAGAGTAATA
TNCGAGGCCCTTACGGTTTCCTCTACGACAGCCCAGCTAAAATTTGAGAC
AGCCTGGGCACCCAATTTTGACCACCGGGGTCTGGAGGTTTTTGTCCGGG
GGGACTTGATCAATCCGTTGTCTAAGTCAACAAGATAGCATGAAGATAAC
GGCTTCTATAAAAAAGCTCAAACTAAGTgaatttgatatgaaaattttaa
aagaagtgCCTAAGAGGACCTCAATTTTTTAATATCGGTTATTGCTGTAA
AGTAGGTGGTATTTATTCCATTTTGAAAGTAATATTTTAATTGGATTGAT
CCCACAGGGATTGGTAAAAGgaaagtagtttttttttttttttatcaaga
ggAAAGTAGGGTATTTTTTCTAAAGGAAAGTAGCGTTTTATATCAAAGGG
AAAGTAGTGTACTTTATCAAAATTAGGTTTATTTAGGACTTCAAGTATAT
TGACATTGATAACTGCTGTCTAACTTTTAtcgataacttcaattttgacG
GTAGGCAAAGTACCATTTTATTTCTCTATATCCCAGAGGAATTGGTGTAT
GAAAAGATGTATAATTTCGTAGAATTAGGTCGTTTTAGGACCTCGAGTAT
CGGTAATTATTGTAAAGAATATGGTGTTTATTTAAATTTGACAGTAGGCA
AAAGTAACATTTTATTTCAAAGGAAAGTAGTGTTTTTTATCAAGGTGTAT
AATTTCGTAGATTAAGTTTCGTAGAATAATTTTTCGTacagtatttattt
ttttatcgtaTTCCAGGTTGCCACGGGCCTTTTTCCCACGAGAGCCTTGA
AACGCCTAACTACTAAACTAAATAAAAGGGTACAAGCCTGTCTCAACAAA
TTATCTCGTTTTCACGTTCTTCATTTTCTTAGATTTTGCTTTTAAGGCCT
TTA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00051565TCONS_00051565Clytia hemisphaericatranscript
TCONS_00051566TCONS_00051566Clytia hemisphaericatranscript
TCONS_00051567TCONS_00051567Clytia hemisphaericatranscript
TCONS_00051568TCONS_00051568Clytia hemisphaericatranscript
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_202supercontigscaffold_202:1102636..1106388 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
17.05	15.47	9.46	7.25	0.78	0.53	1.87	2.08	1.88	1.27	2.95	1.25	1.33	1.75	5.38	4.94	3.28	2.25	0.44	0.49	0.7	0.66	7.38	7.81	1.47	1.17	1.01	1.83	31.51	31.7