XLOC_032761 (gene) - C. hemisphaerica

Overview
NameXLOC_032761
Unique NameXLOC_032761
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_204:37095..41772+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_032761 ID=XLOC_032761|Name=XLOC_032761|organism=Clytia hemisphaerica|type=gene|length=4678bp|location=Sequence derived from alignment at scaffold_204:37095..41772+ (Clytia hemisphaerica)
TCATTGGCACTTTCaagaaagtaaagaaaaacaataCTCTTCAATATATA
GTTGGCTGATCAGTTTTACTATTGATATTTTTAGCTGCTTTCGCTTATGA
AAAGATGGGGCCGGCAAACACCTATGTCCGGTCGATTGTCGTCCTACCGG
ATATCCGTGATGATATTTATCCTCATTCCGAGGCACTGATCCGTCTATTG
AAAGACACTGGCTGCAATGTAAGGAAAAGTTTTATTCCATTTCATATATt
gccttcccagctggcacataacgttgtttcaacgtttaaataacgttcac
aacgttcatataacgttaaatgaacgttgaaacaacgttgtgtgccagct
gggttctAGTCATGGTCAGAATATTGAAAATACCTGATTTCGATATGTGG
AGTATTTAGCAATTCAGAGTTAAGTAATTGGTCAAATTACATATCTTAAC
TCGTGGAAAAACATAAATGGAAACCATAACCAATTTCTTTTTGTCCCTCT
GTTTTAGTCCATCAGACAACTTGCATTTGATGCGGACATCATTGAGCTAC
CCggtgaaaaatttttcaaactatcGAGCCAATGTCTCACAAAATGTCCG
TATAAAACCAGTGATGTCGGCAAAATATCTCCGAGAATCTTCATAAATGT
GCCCGAGCGTGTCAACGTGTCCGGTGGACCGTTTGCGGAAGCCATCCACA
ACAGCTTCCCCGAGATCAAAGAAAAAATGAGGTTTATTATCAAGTTTTAC
CAATGTCTCCTGGCGTTCCAGTTGccaccaaaaacaaaaaagctcACGTT
GGTTGGGCACAAAAATTCTGGAAAGACGACATTCGTTAACGTGGTTCGTG
GCCTTACACACCCTGAATTTATCGCCAcactttcaaaagaaaaagttttt
ggtATGTCGATGATTCACGATCAgactcaatttctttttatcGACGAAAT
GAGTCCTGAAATCTTGACGGCTAGTCAGGCCAAGATCCTTTTGCAAGGCG
GTCAAGTGACAGTTTCCTGGAAGAATCAGGACCCATAGATTGTTGATAAT
CGGGCTGGTGAGTACAGTGATTTTGTTTAGCTTGTTTTCTTATTTGCTTT
TTTTCCAATGGTCGCTTTGAATATAGACTTTTTCGCGTGTGGAATAGACA
CCCTAAGtgactcccgggggggggggtactagggcaagatgggttagtGG
GATGCTCCGCttgtcagggtacctttttaaaCTCCAGGTTGgatcgcaaa
aacaccaaaatagaaaaatcagtccctcgtagggtgcctatttttggaaa
atttggggtaaaagtagaaaatttgagaaaattttggaatgNGGTCGATT
GTCGTCCTACCGGATATCCGTGATGATATTTATCCTCATTCCGAGGCACT
GATCCGTCTATTGAAAGACACTGGCTGCAATGtatggaaaattcttattc
tatTTCATATATTGCCTTCTAGTCATGGTCAGAATACTGAAAATACCTGA
TTTCGATATGTGGAGTATTTAGCAATTCAGAGTTAAGTAATTGGTCAAAT
AACATATCTTAACTCGTGGAAAAACATAAATGGAAACCATAACCAATTTC
TTTTCGTCCCTCTGTTTTAGTCCATCAGGCAACTTGCATTTGATACGGAC
ATCATTGAGCTACCTNcacttttttcgcaaatttcgagtcccacgtaggg
tccaattttcgaacctcagcggagcacccccgtcagtcgacaagggtagt
acccccccagGAAGTGACTACGATCATTCTTTTACGTTAGGTATTTTCAT
CACATGCAACAACCGTCCGAAATACGGTGACGATAAAAAAGACGTGGAAG
ACAGGATGGAGTACATGGAGACAAAGGAAATTCCTGAGGACGAGAGTGAC
TCGTTTGCAGCCACATGGATCCGTGAGCATGCGTTTGAATGCCTCCTCTG
GATGTGCAATATGATGAGCgaaaatgatgaatttattgatGAGAAGGAAC
TGTTTTTTGTGAAACCAGTTGACGACTACGTACCAGTAAAGGTAAAGTTT
TATGTTGTATTTTACGTGAAATTATTTGGTTTAGAGTGATGTATTTCATT
TTTGAGCACTTAATTTACAGAAACAATTAACTTGTGGTAACTTAAACACT
GTCNAATGAGGTTTATTATCAAGTTTTACCAATGTCTCCTGGCGTTCCAG
CTGccaccaaaaacaaaaaagctcACGTTGGTTGGGcacaaaaattttgg
aaaaacgaCATTTGTTAACGTGGTTCGTGGCCTAACACACCCTGAATTTA
TCGCCACACTTATCGATTCACGATCAgactcaatttctttttatcGACGA
AATGAGTCCTGAAATCTTGACAGCTAGTCAGGCCAAGATCCTTTTGCAAG
GCGGTCAAGTGACAGTTTCCTGGAAGAATCAGGACCCATAGATTGTTGAT
AATCGGGCTGGTGAGTACAGTGATTTTGTTTAGCTTGTTTTCTTATTTGC
TTTTTTTCCAATGGTTGCTTTGAATATAGCCTTTTTCGCGTTGTGGAATA
GACACCCTAAGTGACTACGATCATTCTTTTACGTCAGGTATTTTCATCAC
ATGTAACAACCGTCCGAAATACGGCGACGATCAAAAAGACGTGGAAGATA
GGATGGAGTACATGCAGACAAAGGAAATTCCTGAGGACGAGCGTGACTCG
TTTGCAGCCACATGGATCCGTGAGCATGCGTTTGAATGCCTCCTCTGGAT
GTGCAATATGATGCGCgaaaatgatgaatttattgatGAGAAGGAACTGT
TCTTTGTGAAAACAGTTGACGACTACGTACCAGTAAAGGTAAAGTTTTAT
GTTGTATTTTACGTGAAGTTATTTAGTTTAGAGTGATGTATTTCATTTTT
GAGCACTTAATTTACAGAAACAATTAACTTGTGGTAACTTAAACACTgtc
atttttgaatttaaaaccacTACCGTTTCTTCTAGATTAACGTGTGTGTA
CCAGATGAAGAACTTCGAAAGCTCGCTGGTATTCgtgataaaaaatcaac
caacaaGACAACGCCGCCCGTGTCCAACCGAATCGATACAACAGCTTATA
TAGACGATGGTCAACAACCGGGCTTTTCAAAGTGGTCAGATGAGCACAAT
CCACCCCAGTGTGATTCAACTGATTCTGAAGAAAGGACAGGTAAATTCTT
TCACTTACTTGCTAAGTGACACTTGAAATTTAATGTGCATTTACAAATGC
ATCAAAACACCTAATAACAAGTTGACAAAACTGTCATTTGTAAGACTTTT
TTATCCTTTTCGTTTTTAGCTGAGAGACTACGACGACTAAAGGAGAGAAG
ACGGGTACGAAAGCGTCACATTGAAACAACTGATGAAGACACAGAAGAAG
GTAACTCTTTAGACATTGAGACTCTTGGTAATCATTCATCTCTCCAGTAG
ATATTTTTACTTAAATACGTTCAACACTTTGCTTTTTTAGAACAACCTCG
AAAAAGAAATTCCTACGAACCCGAGAACGAACATGAATGTCATAGATTTG
AAGGTATAATCTTTTGCCCTGATATTGCAAGAATATATAGGCTAGAGGCT
AGTGGATCAATTAGATGTGGATATTTTTCTGGCCATTCAAACCATTATAC
ACTTTACACAACCTGTAAGAGACGTGTTTTTTCGAAAGGATTACTTTCAA
GGATGTTTGGGAAAACTTCAGATCTCAAGTCTAGTTGCTGAACTAAAATT
TAATTTCCTTGTATTTCAGACGAAGAAGATTTGTTATGCGGGGTCAATGA
AACAATGAATGCCTTGCTGGCTCATCTTGACTACGCTGGTGAGTAAAGAC
TTTCTTCTAGCTCTctagaaaagaaagaaacatcATCTAAAATTTCTTAG
GTTTATTCATTTGAAGCTTTTAGCCGTTATATAGATATAGATCAGAACTT
TGAAACGATTTAActcatttcattttaaattttgaaattccatAAATGGT
TTTGGGAAATTTTCCTGTTCAATGTTTTATAAATTNAAATTTTGAAATTC
CATAAATGGTTTTGGGAAATTGTCCTGTTCAATGTTTTATAAATTAACTT
GTCAGTGATTGAACATAACAAGGCTTCTTTTCAACTTTCTAGAAGATGGT
GAACAAGTAGATTTCGTGGCTACTTTCCCCACGACGAGCCGCGCTCATTT
CCTACGAAAAGCGGAAAAGAACaatcgaattttcaaatttaccgAGATCA
ATACCGTCCAGTACTGNTAGAAGATGGTGAACAAGTAGATTTCGTGGCTA
CTTTCCTCACGACGAGCCGCGCTCATTTCCTACGAAAAGCGGAAAAGAAC
GATCGCATTTTCAAATTCACCGAAATCAATACCGTCGAGTACTGGGCGGA
AATGACTCGAACAATCGTGAAATGGTTCGATAGAGGTCCAAAACGCTTGA
CTTTTGCACACTATAACACCTTCCATGACAACATGGCTCGCCACGGTGGT
GTCAAAAGGCGGGGGGCAAAGCCTGCTATTGATTGTTGGTTTCTGGTTGC
AGGACTAGTTCGCGATGGATTTGATGCAAAATCGTACCTAGCTATGTTCC
CTTGGATAGAGAACGACCTAAGGGCAATTCGCAAACACTTAGATattaaa
actgaaagaaaacttatttgaaaaaaag
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00051741TCONS_00051741Clytia hemisphaericatranscript
TCONS_00051742TCONS_00051742Clytia hemisphaericatranscript
TCONS_00051743TCONS_00051743Clytia hemisphaericatranscript
TCONS_00051744TCONS_00051744Clytia hemisphaericatranscript
TCONS_00051745TCONS_00051745Clytia hemisphaericatranscript
TCONS_00051746TCONS_00051746Clytia hemisphaericatranscript
TCONS_00051747TCONS_00051747Clytia hemisphaericatranscript
TCONS_00051748TCONS_00051748Clytia hemisphaericatranscript
TCONS_00051749TCONS_00051749Clytia hemisphaericatranscript
TCONS_00051750TCONS_00051750Clytia hemisphaericatranscript
TCONS_00051751TCONS_00051751Clytia hemisphaericatranscript
TCONS_00051752TCONS_00051752Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00051745-proteinTCONS_00051745-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_204supercontigscaffold_204:37095..41772 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
6.45	6.11	2.17	1.28	17.03	12.56	18.56	24.8	14.95	17.39	16.56	13.43	13.57	16.24	15.13	16.32	16.85	16.57	29.31	27.85	13.15	11.13	13.03	12.32	19.79	23.02	7.44	10.45	10.21	7.16