XLOC_032769 (gene) - C. hemisphaerica

Overview
NameXLOC_032769
Unique NameXLOC_032769
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_204:128945..132702-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_032769 ID=XLOC_032769|Name=XLOC_032769|organism=Clytia hemisphaerica|type=gene|length=3758bp|location=Sequence derived from alignment at scaffold_204:128945..132702- (Clytia hemisphaerica)
GAAAAGGATGCTTATCTACACGCTGATAACTGTTCTGGTATGATTAATTT
GTTTTCGAATTTTACTCTTCTGTGCCTAGTTGGAGGGAGGGGGTATTCTC
AGAAAGAAATTAGTATAAAGTCGGTATAAAGTATTCTCTGTAATTCGAGT
CTTCCTCTAACTCGAAGAAAATTCTCAGCCCTGGAAGATCGAGAGAGTCA
ACTAATAAAACTTTTTTCGGCACTATGAGCATCAAGTTTTTCTGCTTCTT
ATTTTATGTTAGTTAAATTTTGAGTCAATGTAAGGTTTGTTCTTTTAAGA
CTTTTACAATGACAAGATCAATTCTGATTTCAATTTTTTTTTCCTTTTTT
CAGGACAAAACAAAAACAATGCTTTTGTATGGTACCTCATGTGGAGGATT
ATCAATGGATATCACGAATCTATTGAATACTCGTTTATGGTTGCCGGACA
TACCAAGTCTAGTTGCGACAGGTACAGTAGTTTATTTAAAGGTTTTTTTT
TACATAAGTGTTCTTGTCCTCTTTCTGACCAATCTTGCTCCACATTTGTG
TCAATCCAATGTGAATTAAGATTGATGAGTAAGCAAACGATATCACTCTT
GTTTAAAAACAAAACCTTTAAAGTACTAAAAACTAACAGAGGATTCGATC
AAAATCACTTTAAAAATTGTCATTATCGAATCATCCTAATAATGCTAAAG
TTTCCTTAGGTTAACAATAAAAATTATACACATAATTTTTTCTGCAAATC
TTAGCTTAACAGATTCATACAAGTGGGCTTCCATAAATAATATTAAAAAA
CATTTCAAATATTGTTACAACAANAATTCATCCATAAATAATCCTTTGGC
AAGATCTGCGTACGCGGGACGTAAATTTGTATATGTTCGAGAAATGCTAC
CGATTTGGTTCACAAAAAAGCCCCGAGCAAAGTAGACTTTTCTTTATTTC
ATAAAATAAAAGTGTTTTTAAAATTATATCGAGTTTGACCATCCAATCAA
GTGCGAGATGTTTGTTTTTATGTCGTTGCTGCTACTTTCACTTTTGCAGA
AGATGGCGATTTTTGTCAAGGCAGGATCCTGCTGATTTTTTAAGCTGGAA
GGCATCTTTTGCTTGTAAAATAACGTTACTGCTGTTCACACTTATTGGAA
ATTTTACTCGAGTATCATTCTTGAGGTTTTTTACCACTTCCTCTGGGAGA
GGAGAGCTGTCCTACCATCCACTTGCTAATGTGACAATGTGTGCAACTTG
AAATTTTTTCGATAAATGCAATGGTTTGACAGATGGTTGTTTACCTTGTG
GCATCCATACTGCATGGCACATTTTTGTGACAATTGATTGGAGTAACCAT
TCCTACTACATCAATTGATCTCATCGAAAACTATTTTTATGGCTTGAGAT
CAAACCAAATATCTGAAACTGTCAAGTCAGATTTAAAGCAACATTTGGAT
TTCGAAATATTTTAACATTTAGACTTTATTATTTTATTGGAATATCATGT
CATGGTTAAACTTTACATTCAGTCGAACAATGATTTTTTTGTCATGTTGT
CTATAAACGGTTCAGCGTATTCGAGTAAACGCTTTTACGACAAAGATCAT
ACATACGCCATCAAATATTTGGTGATTGTGGTCAGTAACATTTGTTGAGG
AGGTATGCTGGGAAGAACAGACACATTATTTATTAATGGACATTATCAGA
GTTTTTGACTTTTCTAAAAAAGCGATGCATTGTGGGATTGTTTCGAGTGT
ATTACAAATAATATTTCTTAGGAACTCCTCGAGGGAATTCTATTGTAATA
AATACAAATCGCTTTTTTAGAAAAATAAAAAACTTCAATAAGGTCTATTA
TTCAACACGACATAAGAAAAACTTTGTTGTAGTTTGAGATCAAGCAAACG
CAAACATTACCAGATTCCCATCAAGATTCAATATTAATATTATGTAGCTA
CGTATAATATAATGCAACACAAGAAGGGGGACAAATTGTGAATTTTTTGG
TGGTACATGCGACGTTTTGTGTGTGACATGTGATGCTTAATGACATTAAA
TTGTACATGTTAACAGTAAGGCAGCAATCAGAAAATACACTTCCATTTTA
TTTTTAATCTTTTTAAAGTCAGTAGTAGAAAATTTCAAATTCACTGCTGC
TGGTGGTCATTATTCAGTTCAAACACTTTAAATAATTTCCAAATAATATA
AGCTCTTTCACAGCATTTTCCTCAAAATTCTTGAACATGTTACTGGCAAA
ATGAAATGCATCCGGAGAGGTTCGTGATCGCTGCCTTATAATATTGGAAT
GTTTCAAGGGGTTCGAAGTCATTGCATGATTTGCTTTTTTGATTGCATGA
ATGTATGAAAACTAGTAGTAAATTTATAAATTAGTGATATTTTTGTAAAA
ATTGATTTTATTCTTTACCACTTTTAGTTATGACATCCTAAACTATCAAA
AAGTCCATATTACAATGTCACATTTACTGTAATATTTTAAAACTNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNACTACAGAATCAAAACAATGACGAGAAAGACTACA
TTATTACTAAAACTACACATCAATGTGTTATTGTTTTAATGACTTCATGA
TTGAAATAGGGTCTTTTTTTCAAAGGATAAGTTTGTTGAAAAATTCTAGA
AGGATCTTTTACAACTCATCAAATTATTTTCAGTTTAAAAGCTCTGTATG
AAATACTCTGTGTTACCCTTTTAGTAATCCCCCTATGTTACTAAGTCCAT
GTCCATGCTACGATGTTACTCTTTACAGTTTTATTTTTTTATTTTTGTTA
TTTTACCTTGTGAAAAGTTGTATTGGGCAGATATCTTTATACTTTTTCCA
GGAAGATTTTTTGAAACTACTACAAAAGTATTACAAAATCTAGTACAAAT
GACTTTTTTATCTGTCTTTTTATTTTTTCAACATCCTCTTCTTTGAAATT
ATTGTTATGACTCACTGGCAATAAATTCTTGGTGAAATGTAAAGGTCTTA
TTAGTTTGTTTTTTAAATTCTGTATTAATAATGGAGTCGTCGATTTCTTT
GCTTTGCGAAAACAGAACGCTCGTTCCGCAAGCCCTTTTATGTTGATAAA
AAACATTTCCAGTTTTTTGTTACAACAATATTTAATAACTGTCAAATTTT
ATTTTAGATGCTTCGGCAGCTTCAAAAAGCAACTGCGAAAAACACGTGTT
TCATCGCTATACGAAATCGCTGACGTGTGCAGCAAGTCAAAGTGCAATTT
TCCCGTTCTTGTTGGCAACCACAACAAGGAAATCAATGTTGTCACATACG
ATTGGACAACATATTTTGAGAAAGACTTGAACTTTCAAGCTATCAAGGAC
ATTTTACAATGTCACCATTTTCGTATGACTAAGGAGGAACCTGGTATTGT
AACCTGCTTGAAATCGCTTGATGATGAACCAGTTAAAGTATCAATTTTCC
GTAAACGTAATCCTCCGAAAGTGACATCTGAGCTACCAACAATTGTAACA
CCCAAAGGTTTCACAAAACAAAGAGCAAGTTATCTCCGTAAGGAAATTCG
TCAATTTTGCACGCCTGGAACAGAGGATTTGGTAGCACCGCAATCGTATT
GGTCATTGTGACGAATTTTATGTTCCTTTAATTTTCAAGCATCTTTTACT
ACATTTAT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00051761TCONS_00051761Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00051761-proteinTCONS_00051761-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_204supercontigscaffold_204:128945..132702 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.63	0.6	0.35	0	24.44	13.77	8.56	9.95	6.39	9.83	8.62	6	5.9	3.39	5.44	5.85	3.99	4.18	3.85	11.32	4.42	5.64	4.03	4.27	1.71	3.54	14.71	9.96	7.11	5.99