XLOC_032979 (gene) - C. hemisphaerica

Overview
NameXLOC_032979
Unique NameXLOC_032979
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_21:125722..132226+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_032979 ID=XLOC_032979|Name=XLOC_032979|organism=Clytia hemisphaerica|type=gene|length=6505bp|location=Sequence derived from alignment at scaffold_21:125722..132226+ (Clytia hemisphaerica)
AtgctctattttttttttttgccaaaatacaaaaatggtagagtgaGCTG TGATATAGTAAAAGATATCGAAAAATCTCAGCTCTGTGTTTTTGGAATTT CGTGTATGATTTTTCTCAAAGCAGAATGGAACCTGAAACAGTCACTATGG TCAGAGGTGGAAGCAGTTTATTAGTGAGAGGTATGTATAGGGGTTGTATT TTGGGGGATGTTTTGCTGGGGGCAGAtgttagcaactccagaagattttt caaattttaatttgtttttcaaaatctatcctatcttgtagagctttgaa aaggaaagaaaatgaggggtcataggcctccagaggataagtggttgtaa agatattcaaattttagtgtcaaaaatttgactaaaaatgtcaaaaaaaa ggttaggttaggatccagactccacctcaatttgcaaaagttgctagcaa aattaCACCGTGAATGGTCCTAAATCCAGTCAGGGCCTCCTTGGTCTTTT ATAATatttagttcggatagaataaaaacatacctgatcaacacaaccaa accttttgtcttgcgtttactccttcgcaacaactttcgtttttgtttat gtaggttttaaaatccacaagtccAGACGATCTctctcaatcgaacagaa tcgacgatcgaaccagtcgaaccaaatcgaacgcaatcgacagattgaaa ttcgattgtcgaacgcaatagaccttttcgcctttccatccgccatcttg aattgtatgcaaaaatagaggaacaaaaaagccgtggttggatttaatta gttggaaaatatgcaaaacatatgcaattttacacaaagattaaaaatac AATCAAAGCATCTTATagagaaatattataatcattagaacaataaaaga tggaatttcttaatccaaaaagaaatatttacagaacaacaaaagccttt tagaaatttgttcttaaagacattgcatattgtgTTTTCCtgtcattaaa aaattccaccaagacggagtacacacatcaaactttcaaaacacgcaaac tgaaagcatgattatgacgtcacacattcagaGGGTTCAgaacaatgttt tgatttgatcgtctgacggttctattcccaggagaataatttaccgtcag ccgaataaggatatttttgtaccttcgcggatgatttttcagcttgagtt tatgtctattgttatggttttttgaagtgcttgttctaagagatgagcga atttgattatttctagttttcaaaagaagcaaatctaatctttcttctac aagattacactttaatataatgccaattatgcatgtaagttttatattaa tactttctttttgcacaNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNtgttttgcatactttctaagggaatttcaccacggcaatt tggccaccataatttttgcatacaattcaatatggcggatggaaaggcga aaaggtctatcaaatctcaatcgaacgtcaaaattatgggtaatattcga ttggttcgattgttgtttgactggttcgattgtcgtTCGACTGCATTCGA TTGTTCGGGTgacacgtgcgtttggtttgggaacgcgaaacacgaacacg aactacccatgtctatAGACccgtttcaatgttttgatttttcgcgTTTG TATGCGCATGTGCCAAAATAGTTACGGTTTTTCAGAGGCAGAAAACACGA AGCGCTCACTGGAAAAAggcagttttgattttatttttcaaaatctcttC ATCAGAATTTCATGATATTTTATAGTATAAGAATCCTATACAGTTCTTAg ataacatactaaaatttctattcaaaattccttctagatcctGAGAAAAT TGACATAAACTGCGTGCCTCCAGCTAATGTTGTTGTCTTTTTTGCCTCTG TAAGTCGGGCCGTTTTGCGGGTCGTAAGGAGCAGATGTAAACATGTGACG TCACATGAAACGGGTCtatacttttcaatatatctccagaactactgtaa cagattttttgaaattctgcaaaaaggtctaagttcctgaatagttttac tatgttctgtgaaaaaatcataaccatcagtagcaactccagaaaatttt tcaaatttcaattttttttcaaaacctatcctatcttgtaaagctttaaa aaaggaagaaaatgaggggtcataggtctcagaggataagtggttgtaaa gatattcaaattttagtgtcaaaaatttgactaaatgtcaaaaaaaaggt taggaaaatagcttggaaaaattcgaaaaatgtgtcaaaaaagaaaaaaa agaaattttccagtcatgcttcttcaattttgcatatctcttttttctag tgtagctagagacctgaaatttggagggagaattctttgatggtgttaga atattattatataaaaatatttgtaagatatttagtatatttatcaaaat aacgaaagatatatatttttttgaaaaaagaagacattgcattgttttat ttttgtttttgaagaaaagtagcttggaaaaggttgaaatgagtcaaaaa aggtggtaggacccattttcaaggggcctcttgAAATGGAGtcgaacaaa aacttatgagtaaagaataagtttttctgaaaggagaaaccccaaataaa aagaaaatccatttcggcagaaataaaaacttttttttgggacattccca tgcaaaagaagcaaaaaagtgaaaaaaactacatgaaaatgaaagaacta aaattggcgaatgtgatttttgaattcctcgccctttttctgataaacat acaaagtttcagcctccaaatacattttcctccgtttccagacacatttc tTCATCGATagttgcattttttttttctcccgtcggcaaacaatttgcaa aatgttgcaaaacgttcggcattttaccaatttgccgtctagcccgtgtc cacagtgttatatgccgctggaaagctaagatcacaggctttcatttagt aaaaaccagaACGCTTTAGCATGTATACATAGAAAAAGgttcgaagggtt caaagttcacggaagaatgaaacatttggtttgacgtcagcgaaagttgc atgacttctggagtcgctaccatcagtcaaatactcgttcatctatttaa gattgaagacaaaaatttgcgaagaaagataaaccttgagcacaaaaaat gcttttttaaacacttttttccaccgaaaaacaaatgacttttacagact taccttccccaaacattgaagaagcctcttctaattaaagtaaatgagat agcAACAAAGCAACAGACGTGCTTTTcttgccgccattttgttttagaat aagaattctagagaattccattcggtTCCAGCCCCGCGGTCTTTTttatc caatcagatcgcgcgatttcactttcgctttctctagtctaataagactg cgggatttgagtcatgtgacatctctattaaaaaacccgcgcgaattaaa atagaaatacagggggtcacactactggctacaggaactgaaagcaagca attaaggccaatatgtttggtttttctgaaggacaaaaggtataggaagc tttactgaaatagggataaggctgggacaatctatttaaaagatatggac aaaaaaaaggcacttttttgggtgataattaagattttacttagaaactt taattttcttacccccgtctcggccccccctgatatgagcaagggaacaa TGTTGGCCATCCCTACTGacaatttcagatcaaaacaaacaaggaattaa ttcctgtagctcaaagaaaattggaaaaagctggtttttgactgtttctg atcctaaagtgctattttttggtaaaagctatgcaatttatgtttggatt tatagaaagcttacccattcattgtcaatacattttttatttgaaagtaa tctcttcatggaataaaaagatatcttcaaatcttgtagggtcatttttc aaagaaaatttgccaaattcgattttcgcatttcgccattttaccctacg caaacgcacgtggtgaaacaaggcatgtcccaaatatattttgtgtGACG CGCACCACTTCCCATTATTCCTTAActctcatatatagctcaaaagaatc gaaTCAACGAGAAGGGTCAGCTTTTTAACAAagattagtctctctaaggg tcggatcctaatcgaacgcaatcgaacacaatcgaacgcaatcaaatctg aaaattgcggtaatattcgattgagattcgatcacgttcgacaatcgaat ttcaatcggtcgattgtgttcgatttggttcgactggttcgatcgtcgat tatgttttgaaaaagttgctacAAGCCTATTTTGTAGGCGGGTTTGCGCT ATGGGCCCGGGGGTCCGGGGGACCCTTAAAAAGGGTCCCCcatcaaaaat ttcactttcttaCCTGTTTTTAGGATATTTAGCAACTTTTGTATATGGtc cataaaaaaattatgtcatAGTCCCTCCCctagatttaggaccactcacg gtactgaGTCGCTCTATAAAGTTTGGGAGGCCAAAAATCAACAGAGTAAA AAAATCTCCTTTAAAGGggcattaaagtagtaaaatgtaaacattgcgcg agccacgtgtcattaaagagaacaattaaaatcacgtgtccaaaacaaac ttgtaaaacNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNgtttgatttttttattttgacatgtgacatttgttttgatttt gtatccgctgcatacagtttgtttacaaatttcacaagtactgttatgtc cctttaactaAGGTAAAGATATCTCCTAATGAAGAGAACTTCTCTTAGAT AGAGTATAATCCCGTCTGTCTGCCCACCCAGTTAGGAGGGGCTGATCCTA TTTTGCAACCAAATGTCCTACAACCAAAAACCCATCAACAAAAAGATATC TTTTGAGGTTGGGAATGGGTCCTGCAGAGATGAAAAGAATTTGACAAGGC ATTTGTTTGGCAAACTCATAAACTCTAATTTTGTTCTTCCCTTTTGTCTT CttatttaaatttctttcttttaggaAAGGAAAGATGCCCTGGAGATGGG ATGGAAGATCACACCTTAGCACAACACATCAAAACTGTCTCAACTTCATA CAAAAACGTCAACAAATCCAAAATTCTAAACCCTACACCAGCAATTgtta agaaaatcaacttcaatGATTCTCAACAAAACTTAACAACGTCTGGATCT GATTCTTCcatttacagtaatatattcACCACGCCTGACCAGACACTCTC AGTACCAACCAGCCACGATGAAACGCTTCAAAACTCCTTTGCTGAGTTGA GTATTACTAATGAAACGTTGAAGACACAGTTAAGTTTATATCAACAACAC AATGACCAACTGACTGAACAGAAAATGAAGTTATCACAACAGCTCGGTAT ACAAACGCaggtttgttaaaaaaatgttcaatggccaaaatataaagaac tagtttttaagactttgcagactctaaaacacccaatttcttaggaagtt acacgaaaatactcacaaaatgctgaaaataagaacatttgaaggctaaC TAAAATTTTGGACGTTCCAATAAAAAATCGAGTGTTCCATGATATAATTT GACCGCAATGAATACACAAAAGTATTTGACTTTTCTTCTCTGCCATATAC CACCTGCTATCCAATCAGCTATCCTTTGAAAGTGGCGTGATGTCAGAAGT AGTACTTGCTGAAGTACTGACAGTTCATTTTTCTATGCGACAGATTGCGA GTAGGACCGGTTATTCTGCTTCCCAAGCAAATTTCTTGAAAACCCCATAT TATACAATgtataaaaattgtaaaaatttgtcaaaCTCTCTTAAAGAGCT GTTCAAAATAGTCGTTTTATCTATTTCTCGAGAAAGATGTATTATTTGTC TATGGATATTAAATGACATTGATGGCATGTATTGTCTTTGAGTGTGTACG TTACGTTCTGTAATTAGATTTTGATAACAATTCTTTAAAATtgtgacaat ttttttcttgttagGTTAACAATGAAGTAAAGAGATTATTAGTTGCCTCC ATTGGTGAAGATTTACAACAAAAGTAAGACTTAAAatttatctttgattt tttaatttgactGACAATCATTTAAAGATTCATTTAAACCGTCTGAGGAC CGGAC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00052071TCONS_00052071Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00052071-proteinTCONS_00052071-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_21supercontigscaffold_21:125722..132226 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
9.76 8.06 3.15 2.05 26.9 23.76 22.99 24.95 17.05 18 14.15 14.23 10.85 12.6 10.36 10.51 12.84 12.33 10.38 10.94 13.64 8.87 12.66 14.63 14.15 17.2 12.21 11.47 12.57 11.76