XLOC_033069 (gene) - C. hemisphaerica

Overview
NameXLOC_033069
Unique NameXLOC_033069
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_213:682839..686901+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_033069 ID=XLOC_033069|Name=XLOC_033069|organism=Clytia hemisphaerica|type=gene|length=4063bp|location=Sequence derived from alignment at scaffold_213:682839..686901+ (Clytia hemisphaerica)
ctcaattctccagtggggctggggccccaacgggtctgtgacacaggagt
gTATAATATAATTTGTTTTGCATTCAAAAGTCTAAATAAAAACGATAGTA
TAgataaataacaaaataatgaCATGTGACGAAGGAGAGCCATCATGGTA
AAAGACAGTTATCAGAACATAGCAAACGGTCTAACCAATGATGTACTTTT
GGCGATATCAGCAGGACTTTCCATCCTAGGATGTACACTAATACTCACCA
CGTACATGTGCTACAAAGAAATCAGAACTGTGTCCAGACATATAGTGGTT
TGTATAAGCATCTCAGATATCATCACAACTGCATCCAATTTGTCAGCAAT
CTTCATTTCACCAGAAATAGATTCTGAAACAGATGAAATTGACAATATAT
CCTGTACTGTACAAAGCTTTGTAGGAACCTCAGCTGTTTTATGGTCTTTT
CTATGGACTATGGTACTGGCTATGTATTTGTATCTTGATTTGGTGAAAGA
GAATAAGACTCTTGGGAAACGTTTAATTTGGCCCTGGTCTCATTTAATTT
GCTGGATCGCACCGTTAGGGATCAACATGGTAgctttgtttttacataaa
ctTGGGAATTCAGGTGATCGTAATACTGCTGGTTGGTGCTGGATCAGCGT
CTTTGGTAAAACaacatttctttttgtttttattcaagaaTGTGACGAAT
ATAATTCTAGTTGAGGAGCTATTTTTAAAATGCAAGATCAAGCGTGCCTA
TCCACCCTTAATCTTAAAAACTAGACCAACAGACATTTCTGTCATAGAGA
TTTAGGCTCTATACAGAGTCTTTCTCATAGTTTAAATCAGATCAATAAAT
CTTATTTTTCCCTAGTGTTTACTTTATAGAACGTCCCTGGTTTAAAGCTA
TCTTCTGAAGTCGGTTTTGACTAACATAAATATCATTATAACAATGTTGT
GGCGATTATTCCCGCTAAGTTTGTTTCTCGACTATGGTGTTATGATCGTA
CAGGAAAAAGAGGGCAACGTCTATGtagaaaaatggaaagaaaaatttAG
GCAGAAAAGATCTGTAGAGCTCATTGTAAGAGTGCTGGCCCAAGCTTGTA
GGTTTTGTTTCCGGTAAAAGCTAGAACAAGGTGCGAACTCAAATTGTGTC
AAGACTTAATTTTTTGTAACGACAATAGAGGAAAAATCTATCAATATTTT
TGACAGctcagattttttttattgcttCTACAAACACTGAAATGCTAAAA
AGGTCATAAGATGACAATAGGGAAAGCTTGTGTGTGTGAGGTTGAATTAC
AGGATTTGTTTTTCATTTGCATGGTCTTTGAATCTCTTGAGAGGCTAAGA
GGAAAACAAGCAAAGGATAAGATATGGTATGGCTGTGATAAACGGTTCTG
CAGATAAGAAGTGGGCTTTGTGCAGGCAGTGTAGATGAACTTGTATAGGA
TAGAACAGCCAGAACTTCAAAATAGGTTtatatatatatgtgaagaaata
agaatttctgtccaactatattcactcaggagatttgggtggcagagcag
catatatATTAACTTGGAAACGGTTGGTTAAATATCAATTTTAAGATCAg
cagcttttgaaaaaaattacattttgatATAATTTACGAAAATACAATAA
GGCGAGGGCTGAGAAAATACCGTCACATTTTCTTATTCTAGTGGACAACT
ATGGCGACGCCAAGCTGTGGATGTTGGTGGATGGTAAAGGAATCGAACTG
TTGACCTACGTTGTGATCGTCATTTTGTACTCACGGATGAAATTATGGTC
CATCAGACAGATTAAGGTATGACAAGATTTAATCAGAGTTTATCCAAGTC
AAACCGAGTTAGGTCAAGTAGATCATAATGCCATAACTCGTTTACTTTGT
TAATTTGATATGAATTacactaatttttttttatctttttattgtGAATT
CAAACTGATTATGTCGAGTTGATCCGAGTTAACCCTAAACATAATATCCA
CGCATCTAACACTAGATACCAAAACAAAATGAAGGTTCGCACTTATTACA
ACGTAATTCACTGGATGCTGCAAGATACACGGATAAGAAGATTATATTGA
TTCCAATCTTGTTCGTTTTATTGAGGATATGGGGAACGATCAGGTTCTTC
ATGTTGTTGAGGACTGAAACATTAGCCTTCAAAGGGGATATCACAGTATT
TGAGACTGCATTGCTCTACTTACAGGTAAGTTATAATCATTGATAGAACA
ATTTTCATTGCTGTAATGTTTGCTCCTACTATAGTACtattttaattttc
tgatttataAGCTTTCTTGCTCTTCTATTACAATTCATAATAGCATACCG
CAGTGAATCTAAAAATAGACATTGATTTTTCTGTTTGACCGAAATTCAAT
CCCATCACCCTTCGCGTTAACTACGCCTGCATGCAAATTACACTCaacta
caaagaaaaagtaNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNtgactttcacgactttttaattaagacgaaaaggattgtg
ggattgattttcggtcaagtgttaaaagtaataattatgacgtttgcata
acggTGTGCTATTCACATCAGAATATTTTGAGACTCATTTGGATTTTTCA
ATTCCTAAATGCTGAGTATACTATCAAGGTAACAGCTTTGAAATTGTAGC
AAAGGTACCATTGTctaggctgcgcgcatccccagaatttattttgatat
attatatcaaatcatatcagagtgGATATATGCAGCCTAACCATTGTCCA
GAAAGTAAAGACACAAAGCAATGGACAAACTTAGTTGCGTCGAACATGAA
AAAATCTTACTAAAATCTTTCTGGCCACTGATTAGAACAAGCCAAAACCG
TATTCCTTTCTGCATTTCCTTTTTTTACGGGCAGAAGTTTCCCATTTTAT
TTCAGACAATTGGTGATAATTTACAAGGAGCCATCAattgtattttattt
tgttgCATGACACCGGTTGTCCGAAAACGAATCAACAAATCAGTCACGAG
CATGCGCAGACAGAGATTTCATTTGTATGATCATTTGGACAGTACCTCGG
ATACTTCTTCCAGAATATATCAACCAATTGATTGAGGAACGGGTAAATCA
CCGATAATCTGTAATTTCAGCTTCATACAATTTTCTAGGTTCCCAAATTA
CAAAAGCAGTGAGTTTATGCATTTCCCATTTTAACAACTTCTGTCTCTAA
AATTTGAGACAGTAAAAGTGCCGATTAACAGTTGTTTTTTCCCGGACTGG
ATGTAAATTAATCAAAAACTAACAGTCGTTAGTAATCATGGGACTAATAT
AGGTAAGGCTGTTGGTAGCTGTCGGTGTAAATGAGAATCATTGTAATGTC
TTTCAAATATACACtacagtagactcccggttattcgaagctccAAGGGG
GACCGGAAGCTCGAATAGCTGAAAAAATTGTTTCCTGCCTGATTTTTAAC
TTAACCTTAAATGGGATGGCATTTTCTGAATTAAGGCATTTTGGGTTCAG
GAAAGTTTGCCAAGATGACTTTTTACTTTCTGAAAagtttcggtgtttga
agaaaaaaagtaatGGTATTTCGGTATCAAACATGCCTTGGATCTTAAGC
ATTTTTCCTGTCGATGTTGAATGTGATCCATGAAAAATGCATCGGTATTT
TCGGTGCTCGCAGCCCCCTTTACGTATGTCCATATTTAGGTTTATCTATT
TTCAGATGATCGTAAGCGATTATTAGTTAACAATTATGCGGATTTAGTAA
TAACGAGTAGAATTTTAAGCATGTATTATCAGTAATTTATTATTTCCAAG
TAAttattaaggaataagtgtaaAGAGATTTTAATGAGAATTTAATAAGA
AtcatttgtaaattttgaaatagaCATTTTTTAGAAGAATAAAGATGCCA
TATATGATAAAGTTATGATTTCTTGAATAGGGTTTCCAATGATAAAaggt
tttgtttctaaataagagtgatatcgtttgcttactcatcaattttaatt
cacaagctttttc
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00052254TCONS_00052254Clytia hemisphaericatranscript
TCONS_00052255TCONS_00052255Clytia hemisphaericatranscript
TCONS_00052256TCONS_00052256Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00052254-proteinTCONS_00052254-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_213supercontigscaffold_213:682839..686901 +
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
GPR157probable G-protein coupled receptor 157 Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.28	0.16	0.51	0.53	0.32	0.76	18.88	19.31	20.69	16.13	16.43	19.78	11.22	10.46	18.05	22.81	10.97	13.32	17.1	17.67	15.68	14.03	10.63	11.2	9.51	8.75	5.88	4.77	18.04	11.75