XLOC_033079 (gene) - C. hemisphaerica

Overview
NameXLOC_033079
Unique NameXLOC_033079
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_213:1134332..1138050+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_033079 ID=XLOC_033079|Name=XLOC_033079|organism=Clytia hemisphaerica|type=gene|length=3719bp|location=Sequence derived from alignment at scaffold_213:1134332..1138050+ (Clytia hemisphaerica)
CTTGAAAGTGGAGGAGCCAAAGGTATAGTGACATTGTTTGCGCCTACtgt
cgggtacctaatagccggggatTTTGgaatttggggggggggggggttgg
aataaaaatgtcctgggtggaaagtttttgaaaaggaggccagtacagca
gaattagggcaaaagaggtaaatgtcaaaaataatttcccgaaaattaat
aaatgggtgggagggttggaataagaatgtcctgggtggaaaattttcaa
gaaattaattagcgggggggacgcttattaggtacctgagaaTGTTAAAG
ACCCTTTGTTAATCTTAGACTGCTTTCGCTCAGAAGCGATTTGTGATGAT
AttttaagaataactttttatatgGGAAAATTGAGGGGGCCATCATGCAT
AATCTGATTTGATTTGCATTGATCGGagactttctttaaaaaaggaGAGG
GGGAGGTACTATGAGGAGGTCATTGAATGATAATTATTTTCCAAGGTATA
GAGAACGTGTCATTTATCATGTCCCTTGTTAGCTGGATTTACGGGGTCAC
ATATCTACTTTGAACCAATGGCGCGCATCCTTCAGACATCATCTGTGCTT
TGTCTGTGtttttatacacgttttttatatgaacaaactatataagaaca
tataaggTTTCGATGCCAgaattgttaagaacaagttaagaacattttaa
gtcttTGTTAACTCTAAAAcatcgatttcttaggaaaatggacaaaaaat
gctcaaaaagtggtgaaaataagaacatccgaagaacACTTTTgggctca
aaaagttaagagcatccgaaggcatcaaatttttggatattcttataaaa
aaaggtgtatttcgATAATTTAATCAAATATCTTATCTGTGCGAGTGACA
TTGGAGATATATTTCATGAGCGAATCAAACTTATGATTTGCCTTAAAGAC
ATAGTGTTTCAGGTATTAAAACAGTGCAATGAGTAATGATTGGATAGTGA
GATATTTATCAGTATTCTTCgaaaaaaactagaaaattttttgatcctaa
taaattttcaaagaagagGATCGAGTTCTTGTCCTGTGAAGAAGTTTTTT
CTGTATTTGTCAGTATTTGTAAAGTGCAATTAGACCCAAAATTACAAACT
CGTCTCCAATTTTACTgacaattttattgatttttttccacAACAGTTTt
gttatttcttaaaaaatgcAAATCTTTGGAATTGAAGTTATCAAGAAATG
GAAGTGTCATTTAAGAAGGTGCTTTATCAGCCTCTCTTCCACACCTCACT
GtgataacacccctgtgtcacagacctggtTGGACTCacgccccactgga
aaatctagATAAAATTTCTTCCCGGAAGCAAAATACCCTATAATTTTCAG
CCCtattgggaaattgactttgatttcatctatattgaaaattcaatgaa
aaaaattgctcTATTTTCTATCCCCTACacttcgatagaaatttttattc
acGCTGTAGGAAAAAGTTCCTCTTGGgctctgagacaggggtgttgtgTG
AGTGTATCAataattattcattattttctctCCATATAGCAATGTACAAA
AAATGTCATCATCGGAATCACATATTGTGCAGATAGAGAGCCCATCAGGG
AAGAATAGCAAATCATTTGTCTTCCATTGGAGCCATCGAACAGCAAAAGT
ATCAGATACCCGTGATAATTTTGAACCGAAAATCAATGAAACTCCTCTGA
TAGATAAATCCCCAAAGGAGACCAAAAGCAAGCCTGATGCAAGCTATCAA
TCATTAGCCAATAACGCATTTGATAATAGAAGATCTGTTTCACTGCTTCC
TCCAAATCAGATTGAAAATAATACCCAGCAGCCTCCTTGTGATGGATCCA
CTTCCAAAGATTTTGCAGCTCAGAACTCGTCTGACTCTCCAGAATCAACG
CAGAATCAACTGTTATCTCCTATGCTGATTCTAGATAACCAAATTTATCA
AGATTCGCCTTTAAGCAAAGACAAGAGCTCGCTAGCGTcttcttcaaaag
aaaacagtGAAAATGGAGGAGCTAGTGAGATATCAACATCTCAAAATAAG
ACTCTGAGCAAATATAAAGGTCCCATCTTAAAAATACCATCTTCAGACAC
AAAACAGGTCACGCCATCTCATATGGAAGATAGTCCAGAAATCTCATCTC
CTTTGGTAACCAAAAAGCAACCTCATTCGCCGTCTCGGTTCCGTAGAAAT
CAACCAAAAAGTAGGACATTTAATGGAAAGCCTACACTATTACGTGCAAT
ATCACATCTATCAAACCTTGATGCGAGCGATGTCTCTGAGAGTGAGGATG
CGGATGGTCCCAGAAAaacaaagtaaattttttgACATTGCGCTCAGTGA
GATGATGTAAAAACTTAAAGCGTAGTctagtggtagagcatccggatACG
GTGCACAAGGTtctgggttcaacccccaggtTATACCAAATATTCCAAAA
ATGgaacttgatgcctctctgcttaatactcagcaattaagagaaggatc
caggtggagcaatccagggagaaagagtggcaccctctCCTACCTtgagg
tagatagctatcgaaagaggagccttcgggtcgcctccgactgaggttac
ttacttacttataaaCCTAAATGACAAGAATGAATTACCTGAATGCTAAG
CTGTGCGCCTTCCCTCTGATATGTTTAGATAGGGGAAAATTCAGGCTAAC
CTGTTATTCAGAAATCCAATATATTATTAATCTCTAGCCactcaaatttt
taattcaaacttAATGAAAACTAAAGATCTCACAAGATGACTAGCTTCAA
ATCCTTCAAAAGAGATTCGCTCTTAGCCTTTGGGCTTAAACTCGATTGAA
GCCACCAGCCTACTTATATTATACTTCCCTGTGTTATTTTGGAGATTAAT
TGCAGACATCAGCTCTTCGTCGTGATAAGAATGTTCTCCTGATAATTAGC
AGGTTAATTTGATTACCTTAATCAGGTTATCACTTTATTGATGGTCTGTA
TAGATAAGATTAAAAGTGTACAAAAAGTTCCCAACCGTAAACTTCAATAT
CAGCAATTATTGTTTGAGATTCCCATCACATAGGGAAAGAATGACGTTCT
GGTacagcactgtaagcttacagcgtaatccctGGATTTCGATGGATCTA
ATCCTTTGCATCGGAGTGCCGCACGaagtttaggactattgggaaacAGC
TCAGTTCCGTGTGGTGTTCAAAATAAGCTTAGCTAACactccagtacagc
gctgtaagcttacagcgtaagcccaggcggtggTTCTGGAGGCCATTCTC
TCTATATGTTTTTAAACcagaatttactggttcttataaaaaggacCGCC
TATAATAATATCCGCTTTTTCTCCATAGGATTTTAACACCTGGCTCTTTC
CGCCGCTTGAAACACATCCATCACCATCGCTCACAAACTATTTGTGTCAA
TCGAACCGCTTCCCGTGACAATCAGGAAGATGATAGTGGCTCAGGTGAAG
GTTTCGCATCACATTTGAGACATAGCTTCAGAGATTATTCAATCAAGAAT
TTTATTAAACGAAAACGAGCGAACAGTGATCCAAGCCATCGGTCAAGGtg
aatttctcatttttgtacacgttttcttataagaacaaactatataagaa
cataaggcttcgatggcca
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00052289TCONS_00052289Clytia hemisphaericatranscript
TCONS_00052290TCONS_00052290Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00052290-proteinTCONS_00052290-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_213supercontigscaffold_213:1134332..1138050 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.56	0.55	0.05	0.19	1.6	1.03	0.93	0.58	0.1	0.27	0.24	0.3	3.24	2.25	1.95	1.51	6.38	4.45	5.01	8.17	0.46	0.51	0.78	0.38	2.51	2.42	4.19	3.53	0.67	0.63