XLOC_033241 (gene) - C. hemisphaerica

Overview
NameXLOC_033241
Unique NameXLOC_033241
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_218:199448..207424+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_033241 ID=XLOC_033241|Name=XLOC_033241|organism=Clytia hemisphaerica|type=gene|length=7977bp|location=Sequence derived from alignment at scaffold_218:199448..207424+ (Clytia hemisphaerica)
aaaaactcaaaaatttttttttttcataaactcttttaAATCTCTTTTTA TTAATGtattatcttttgttttttagtaaataaaataaagtctttaaaaa cATGAGAAGGAGTGATGGCAAGTGTAACAGAAACTACAGTGGATACAACA AATCTGGATGATCATATACGTTCACCGTtccaactttcaacaaaatcaaa agaCAAATCTGTCAAGCTCGTATCATTACCACAGAATTTGGCAACATCCC CAACTCAGAATAATAATGAATCTGGCAGTGGCAGTCGTGACCTGCTTAGC TCTGTCTCTTCCACAGATAGCCTTGAAGCTGGATCACCAAGAACATCATC CTTTGGCGCAAGTCCATTTTCCTTGAACATTAAAAAAGTGTCAAAGTCAA GCGTGGGTTCTACTACACCACTCAGTCCAATACTTTCACCGTCAAGTCTA TCTTCAGCAACTACCCTAACAAATTCACAAGACAAAATTATAGAAATACA AAAAGAAGTCAACTccttaaaaaaggaaaatgaagcaAAAGACGCTAAAC TGAGTTCAAGTCTCAAAAGTATAAAACAATTTTGGAGCCCTGAACTGAAA AAGGAAAGAGCAGCTCGTAAAGAAGAGACTGAGAAATGTTTaatcttgaa agaaaaatatcaaattgcAAACTCACAAATTGAAGTAAGTCTTTAAACAT ATAATGGAACTGGGCTTTGAAAACAAGatcatgtttttattaaaaCCTTA GTTATGGAGATTTTATTGCTGGAatatttgagttttttcttgGTCTCTTG TGTCTTGATTCAACTTTTCAATGATTCATGAAAGTATCAAGCTGGTCAAA ATCAGGATTGTTTTTTGGAATTCATGCTATTTTTGCATTTGAACTTGTAT TTTGTCATCTATTTCACAGCTAAGGCTTATATTTGTTTACAAGTTGAGTT GCTGTTAAGGTTTTTCTGGACCTCTGTTGTTGTTCacagatatttaaaaa cagatttaagttttttttgatCTTGATAAAGATTTTTGATTGTTCCAGAA TTACTGGTCACCGGTCAAATTAGTTTGTTCTAAACATGTTCAGCTTTAGC TCGCACAAGATGTATAACGTATGACACTCTCGGGTTGACAACTTGGAAGA CTTATTACATTACAATAAATTGCAATAAAATGAGTTTTTAAAGGCAAAAT AAAACTCATTgaatgatattttgtaaaaaatcaattagtaGCATAATAAT AGCAAATAACAAAAAGTCTCATAATTTTAAACATAATTGCCAAAAGTCAA TCTTATCCTGACCATAGTGCTTCTGTGATGAGCTTAgataatgttttctt tttacgaTTCTTCAGTGTTGGTGTTTGAAAACAGCTTTAAGGCCACACCA GAGTAGGTTGTTTTATACTAGCATATTTACTTAAGAAACATAAAAACAGT TAGCCTGATCATTACTAAATTTACAGTAGACTGATAATAATCAACActgt tttaaaagtttgtttatatTGTGATGAGTTTGACTGTCCATTATCAATAG AGACGTTCTATATGAAAGAAGTTATTATTTATTTAATGACTTTTGGCCAA TTCATTAGCTCCTTGATGACACCTTTTATTATGATGGTGACGATGATATA ACAATGTCTGAAGAGGATTTTTATAGGTTTTTGATGAGGAACAGGAATAT CAAATTACGAAacaaattttttgagagctagttacttttgtctttgagtt catatcaaaattgaaaaaaaatattcttgattCATTgggaaagtgaaaaa aaaaaaattcttgggtGGTATAGTTAATGAATTTTGTTTGGTTTGTTAGT GATCATTGCTTTATTGTTGTcgctgaaaaatatattttgggtGTTATATA GTTGATGAAAGATTGTTTGGTTTTATTGACATTTTCTTGTTTAATTTGCT GTTCCTTTTTGGATTATTTGAAAGTTGATAAGAATGACTAGATCCAGTGT TCGAATCACCATCAAAAAACCACTTTCTGCTGATGAAGTATGGAGTAGTT AATTATATTCTATctaattttctttgagatatttttgaataattaaattt gatttttagagACCTAACCCTTTGTTTCAGGTAGCTTTTCCTTTATAGTG AAGGACCTTTTCCTCATAACACGCAAGTTGAATCTTTGACGTTAGCTTAG CTTATTACCATTGATATGGCTtcatattttgaccaattttattttcattc ttaTAACTTCAGGAATACAAGAACGCACTAGAAGATTTGGAATCCGAATT CAAATCACAACAGAAAAACATACAAGACCTcaacgaaaaagtgaaaaaca atCATGAGGAAACAACGAAAGACCATCAAGACCAATTAGAAAAACTACGG ACGGAAGTCAGGACGAAAGAAGATGAAATTTTCGTATTAACCAAAACATT AGAAGACCTTGAAAATGAGTATAATTCACAGGAGGACCAattgaaagaga aaaataaatgtgtAGCAGAGCTAGAACATATTTTAACAGACTATGAACAG AAATTGGAGGATTATGATCATTGTAAGAGAGACTTGGAGAAAGCTGTCAA TGCAGTTCAAGAACAAGAAATTGATTACCAAATGCTCAAGAAGGAGTATG ATGAAATGAAATCGGTATATTGTGAAcgcatgtttaaaaaaaatgatgtC ACCCCGTCAAGAACGGAAAGACCGGCCTTTCACCTTTTTCTATAACACCA AACCATACCTTTTCTCGTGATTTCTTTTTTGAGGCAATAAATTGGTTTCA GGGCGCCTCATTGCACAGTGACAAAAAAGATCTTAAAAAAGacctagttt gctagtctatacAAAAACTTTATTTGGGTTTTCTTGTAACACGGGTGACT TGAgtcagttttcttttcaatttagtGCAACTTTTCTATGCAACCAATAA AAGCTGATGGTGGCTATTTTCCCATTGTTCAAATTTTAATCCCTAGCTCA TTTTGTTTTAACAActaaatttgttttctttttatattgaagGTGCATTC TGAATCACAAGCTAACGAAGAAGAAGTGCAACGCCTTCAAATAAAGGTAT CTAATGTCATTAAAACCCTAAAATTTGTGATTCTTTTTATTGCATTTAAT AGGGTAACAGAATAAATCGTAATTGTTTGGAGTAATGATTAATGGCTTAA TGAAAACCTGCCTAACCTACCTATCATGATATCTTCACCAagattttgac ctttaaaaaCTTCTCCGAAACTCTTTATTTTATACAGTAATAACTATGAA TATGGAATCTTAACACTTAGTTTTtggaataaattttgaaatagagCAAT TATTATGAACATCAAACCTGATGATTAAAAACCTTCCTATCAAATACATT TTCAAAATCACTCTCACGTCTaaactaccttaagtggataaatttctGCG TGTACTAATTTTTGCGAGAAgagaatttaaagatttcgcgtggattaaat tttgcgaaaatggccttctttatttaatttcgcgactatataaattgtaa ctagaaaagagatgtgttttttaatcgaacaaagacaaagacaaagtcac tcaaaaactttcaaaaaacttaaaaaattttattttcgcgattgtaaaat tcaaataatttcgcgtggactaattttcgcgaatcaaaggccttcaaaat ttttgcgtggactaaatttcgcgaaaatggccaaaattcgcgaaaaccgc gaaaatttatccacttaaggtataatGTATTTCTTAAGATCGACGAACTG GAGCGAGACTTGACAGATCAAACCAAACTGGTGGACGCTTCTGACGAGGA ATTGAAAAGGCTGGAGAAAGTTAATGAAGAAAAAGAGGTGCGGATTCATA GACTCGAagaagaactgaataaaaatgaaaaagaatacgATGATGTCAAA GAACAAGTACTTACGTTTCTTCATTCACTATTTTTGGTCCCCATTTAACT TTAGTTTGTCATAAATCAAAAGGTGGCATTAATGATACTAATGATAACAT AGCCCGAAGGGTCTCTTCATGGTAGAAAAGTGAAGGTAAttcttggtagg atttcctactaAGAAAGTAACGCCCCATCATCTAGAAATTAGAAGACGCG TTCGTAGCCTACTTTTCTTAATTTGTAagctttaaaatgctaaatTCAAT CCATATCGTCTCGAAATCTTTTGTATCAAATTGTCTTCACTTCATTTGGC AAGGAAAGCTTCAAAACTGCTGTTTCTTCGAGTTTCACAGATATCTTTGC TTTATCCATGTTTGTTACCTTTTGAACTCGAACCAAAAAGTTCCCCTACA TTTAATGAGTTTTCGCTGATtgtattttctcatttttagttATCGACGCT TCAAACGGCACTTGAAGAAATTGAGACGGAAAACAAAACGCTGCAAGAAA AGATACAAGAAGGAACGATATCATCCGATTCTCTCGAGCAAAAAGATCGC GAAATACGAAACCTCAACACAAAGGTTTGACTTTgttctaaaattttatt aatcaACTTTCTCTGCGTCTAGTAGTTCTGGAAAACCAATTTCTCTCTTA ATTGACCTGACTGATTCGATTATAAGTGCTCtcgataaaaaaatgtttaa atgattttttgattGGTTGTTAAGCTTGGAGATCCTACCTGTTTATGGAT CTTGTAGTTTGTTTGGTTCTTTGTCAGACTTTTGGTCGCATTTCATTGTG TTGATAGTTTAAAAGTTTTGTCAGTTGTTTTGTGTTCTGGAAAGCATTCA ATTCATGACTTATTGGGTTGGACGGAACTAAAATTCAGCATGTTCTTTgc attttctattaaaaaaatttgaaactgaCCTGGAAAAAAATCATACTTTC ATGTATATCATTAATATCATAAAATCTTGTAGACGAAAGAAATGTTCTGT TGGAAGACTTCTCCaaaactatattcactcagttTACCTACCTTTCTCGT CGCGCTCGTTCTCAAAATACTTTGACCATCCTTGCAATGATGTTTCTTCA ACAACTACATTAACACCGGACAGATTGGCCTATTTAACTTTATGCTCCCC GAAACCTTTGACGGAAACTCGAAACACAATGGAATGAGCATAAAACATTA CAAGATGATAGATAACAATCCATCTTGATCAGGAACGTACCAACATGTTA AGTCGattataaattcatgttttccTTAGTTTCTCAAGAGAAACAAATCA TACACCGCTAATCGGATCTGctgaaaaaattgataaaatttctGCTCGTG TACCCACCAAACTTAATTTTTCGTCGTTGAACATCAATAAAAATCGAAAG TAATGTGTTTCATTTTGTTAGTACACAAACCATTTACCTTTGTCTCTTGT AGAGAAACATGCTAACGAGGTGGCAATTTAGTAAATTATATGATGCACGC TATTTAATGGTCCTTTTAATTTGGTATTCGAAAATTGTTTGGTATTCTCT GGTATATTATATCACTGTCGTTTATGCTTCATTCAAGTAGATTATGGAGA TATAGCGTAGTTGAATTGATGATAGCAAGTGTATAAAATATTAATCATGG CGGGATAATTTTATTTGACTGATACATACTTCCACATTATAATAGACATT CTTTTATGATTTAAAGTCTCCTTTTGCGCTGTCTTTAATCGTGTAGATTA GCTTTGAGATAAATGGTTTACATCACTTAAAGAACGACAACATCACCatt tttaaatatcaaaatcataTACAATTTTGTTATTATAAATCATCATATAA AATTCATCATGCCGATTTTATACTATCATCGTTTTACTCGACATTAATTT GTTTTTTCCTATCCGCAATACATATGGCATTCGATGAGTCTTTTAGCTAC ACTTGTACGTGTTTTCAGGTGTATTTGATGGAGCGGAGTGGATTTTTTGT CGGGTCTCTATTATATTTGGTATTTTATGGAAGTGTGAATTGAAGGCTTG CCTCTCTTACCTCAAGATTGGATGACTCGCTGATCTCACAAAGTTGTTAC TAAAGCTTTTTACCTTATAAAAATTTAGTGTGTTAGACAAAAATAGTTGT TGTAAAAATGCCATATCGTGGTTTGTTGTTCAACAGTTGTCAGTCGCCGA GAAGCAGATATAAAACTTGTTGCCAACAGATCGTTGACAGGGTACTGACC ACTGAATTCATTATTTTGACAGTACTAGCACTATATGTTCATGTTGAATT GCACGAAAGTGTTTGATCCATCACCCTTCAACCCTAGAAAATCTCTTAAA AACTCTATGATATGAATCTCGCTAAACTTGGACGAGTTTCAATCCCTTCA TCGAGCGTTCAAATTATAGTAGAGTGtataaaaagtttcatttttctcac TTTATAGTCGTTATGCAATTTGGTCTTATGCTAGGATATTTCAAGATAAA TATATTTCCtctaaaaaagctaaaaaggTACTAAAAAAATCGTTCTCACA AAAATTGTTGAAGTACTACTTACGAATGCTTGTAATCACAGGAATTTTGC AAGGGGTTGACACCAAATATGAATGTTCTCTTTCTTCCTTCAGTACGAGA AGCTGGACAAGTATCTTACCGAACGTGAAAACGCATTAGAGTTATGTCGT GATGAACTGAAAGGGGTGAAGAACGCCAACCGTGATCTGAGGATGGAAAA AGATAATTTAGAGAATCAACTGTTCGAACACAAGTCAACTGTGGACCGAT TGGAAAAACAGAAGGACAGGTTTACGAGACCGAAAGAAGACGTTGCTTTA GTTTCTGCACATAACGAACTGAAAGCTAAACACGAGGAAACGACCAAACA GATTCAAGAATTAAGGGTATgttgaaatgtttttgatttgttgttgaATA TGCAACACACATTAATTACCCTTTTCCTTAACAAGTTTTTGAATCGTTCG CTGAATGATCTTAAACGCGTAGCTTTTTAAACTTCAACTGAATCTTCTGC CCTAagatactttacttttttattcattcagaaTTTCCTTTTAAACTGCA GATTGCTTTCACAATAAGCGGGTTGGGTAGAGTAGGAATAAATTATACAT TTTCTCCACTCAGTCACGCTTGTGCGTATGTCTGTACGAGATTTTCGGTG CAGCTAGAAGACTTAAAAGAATTTCTTCACACTAACTTCTTTACTCGAGA AAACAAAATAGTGAAAGCCTTTTAATATTGCTCcctaaaaatttatttaa agtcGATTTAATATTTCCAGGGAAAACTCTCTCAATACGATGATACGATG AAAACGAAAGACAATTCCATATCAGCACTCGAGAGTAGTCAATCCGAACA AAATGAAATTATATTTGGCCTTGAAAAACAACTCGAAGAAAGCAACGCCA AAACAGAACAAAATCAAAAGAATATCGAAGAGGTATTAGatattggaaat ttttgataTGCTTACTGCTTGCTCATGGGAAAATAAAGATAGTAGGAATA GGGGTTACCTATCAGAAAATAAAGTACAATCACCATACGAAGTTGAAAGT TTCGAGGCCCTATTTCCAAAAGTTTatttcccaaattttcaaaGGAATTA GAGTGGAGGTAGCAAATACAAGCTCTTTAtatgaaatttcacttttttcc tcTACGCAACACtttcctttttggacctaccccggtgtaggtcctataaa ttaacctctgtccgtttGTTCGTCCatccgttcgttaccaacttttctcg agattggctaaatagttttttcggattttttgcacaaagatgtgtaacta taaacccttgaatgtgacggagcccgattttcgaaagaaaatctttttgg gcaaatttgggccaaaaaacggctaaaaaacgggtttcttggactttgaa aaattggatcattaattttttctgattttttgcatgaaagtagggtacca tcataggtaaaagatggctcaaaaaac
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00052561TCONS_00052561Clytia hemisphaericatranscript
TCONS_00052562TCONS_00052562Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00052561-proteinTCONS_00052561-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_218supercontigscaffold_218:199448..207424 +
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
LOC102723623PREDICTED: golgin subfamily A member 6-like protein 1 Homo Sapiens
GOLGA6L6putative golgin subfamily A member 6-like protein 6 Homo Sapiens
GOLGA6L1Golgin subfamily A member 6-like protein 1 Homo Sapiens
CCDC170PREDICTED: coiled-coil domain-containing protein 170 isoform X1 Homo Sapiens
GOLGA6L22golgin subfamily A member 6-like protein 22 Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
11.14 11.01 9.47 8.83 20.67 15.85 12.92 14.44 7.65 9.19 8.27 6.94 17.32 16.9 14.62 12.52 28.05 21.41 18.77 21.47 20.35 22.31 13.27 17.8 20.35 20.92 30.37 22.61 18.46 25.75