XLOC_033257 (gene) - C. hemisphaerica

Overview
NameXLOC_033257
Unique NameXLOC_033257
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_218:669616..678457+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_033257 ID=XLOC_033257|Name=XLOC_033257|organism=Clytia hemisphaerica|type=gene|length=8842bp|location=Sequence derived from alignment at scaffold_218:669616..678457+ (Clytia hemisphaerica)
tgcagatataaaatgtaaaattaaagtgaaattgacaaaatgacaaataa aACTGGAGGCTATGATGTTGAATTTGTACATGAAGACATATATAGTAACT ACAGCACATGTTCCATATGTTTGCTTGTTTTACGTGAACCAATGCAAGCA CAAGACTGCGGACATCGTTTTTGCAAAAGCTGTCTAGTTGGTCTAAAAAA ATGGTATAGTTCATAGTTTAtatattttggtattttggttGAAAGTACCA AAACTTGAGAACTTAATACACTTCCTTTGAGGTTTAAGAATTTGTTGCTT AGTTAAATAGAATATACACTTTGCTACTGACATTAAAGAAGAATGAAAAT AAACAATTGAAATTCTCAACTTTTGTGCTTGCGCAGGgagtaaaaattgt tttttttctattgttttgaaatgctgtgtaagcaaatggcaGGAGATAGG TTAAATGATTAAAGTTGGTGTTAGGTCtactttaatttgtttttaaaatt caatttatgGTCAACATGACTTTATATATGTCTATCACGGAAtggtttaa tttttttactattgttttaatgttttttgcaGTGAAAATGNGAATGGTTT AATTTTTTActattgttttaatgtttttttgcaGTGAAAATGATGACTAT ATTTGTCCTGAAGACAGAAGTTCAATGAAGGTAATGCTAatgcaaaatta tattttatttctgTTTGTTTATTGTCTTTGATTGATGTTTATGGTCATTT TATTCGGTAGTGTGAAtatcttggtgttttttttatatttcagaaATGTT GATTTTCAGGGCTTGCCTCAAATGCTAAAAGTGGGCCTTCgagtattttg aaaaatagtgaAGTTGAGACTATTTTATCTGAttcatttttgttttagtt ATTCAGTGACAAGGGGAGAGAACGAGAGATTTTAGGAATTTTGGTGAAAT GTACTAACAATAAAAGTGGGTGCGAATGGAAAAATGAACTGCGCCAACTA GAGGTAAGTTTTATTTACAAGTAGGATAAACTTGAATTTTGTACTTCATT TCTTCAAATCTAAATTGAAAgacaatttttggacctacctccgggtaccc cggtggaggtcctttaaattaaccaacgttcgttcgttcgttcgttcgtt cgttcgttcgttcgttcgttcgttcgttcgttcgttcgttcgttcgttcg tctgttgccagcttttctcgggattgactcattagttttttctgattttt tgcacaatgatgcaaaatgacaatgtctaaaatgtgacggaggccgattt tcggaaaaaaaaattttccggccgaaaatgccagaaatatcccggaaaaa ctggttttttggcactttctcgagattttatcattagttttttctgattt tttgctcaaagatgcgtattaacagtgcccaaaacatggccgagtccgat ttttgagaaaattttttttccggccgaaaatgccggaaataggccggaaa tcgccgtttttctggattttcattggactttttccttataattggttgtt ttttcattcaaaaacaatattaatagaaatgcccaccatcaagcatgttt caattttcaataaagttgatttttgaagccggaactattcaaaaattgcc ggaacaaccttttttcgccggaaagacagtatttcttatatttctcgagc tgtactttatatttttttattaaattttgcacgctgatgcaaaatgacaa tacctaaaatgtgacagagcccgattttcgaaaaacatttttttccggcc gaaaatgccggaaatatgccggaaaaactggtttttggcattttctcgag attttctcattagtattttctgattttttgcacaaagatgcgtattaaca atgcccaaaacatggcagagtccgatttttgagaaaaatttttttccggc cgaaaatgccggaaatatgccggaaatcgccgtttttgcagattttcata ggattttttcgtttcatgtctttgtttttttcaaacaaaaacatcatttg taagaatgtccacgattaagcatggttcaattttcaatgaaactgatttt ggtacaggaaaatcgccagaacagccgagaattgccggattccatgaatt tctcgagttgttttcgtattattctgcattttcatactattgttctcatt ttccaattttcttattacatcaatcttcaggtaggtccattcagcatgta gcttgtttttcTTAGGATCACCAATTGGAATGTGGTTACGAGGAAACCAA GTGCGTGATCACATCCTGCTCAAAAAGAGTTCAAAGACGAATGTTAGACT TGCATCACGCAACAGAATGCATATATCGATTTACAACTTGTTTGTATTGC ACCTGATTGCACAGAAGAATATATGCATTGCGATGAAGAGGTTTGGTTTT GTCTATTTGCTTATGATACCTCTCTTGGGGAGGTGCACCAAAAAACGTAT ACAGGTTTGgctagatattgtgagctttaggatttaatttttttgttcat tctttatttattgtatagaggatgctctaactttgAGCTATCAaacatta ggtttgaaaaagtaattcaaaagttatttccaaaaaacttttttcctgtg tcaaaatttcaaaagatcattaaaaaaagcaatcacgctataaatgaaac aaaatgacaataaaacaattttattgtttttttattgttttttttcttat tcataTTTTACCAACAGTTTCTCCATTTTATCTGCACGTCATATGGACAT TTCTAACacgagcaaactcaatgcagacccaagttctttcagcaactagt cgaggaatggtgatctttttttcaaaagttttcacaCATAGCACACAAAT AACATCAAAACCACTCTTGGAGATATCGAAAACTTTTttcagctttccaa aaatattatcccacatGAGAATAGCTTGTttaccatatttttaaattccG TAATTGATTCCgttgatgaacacagttgcattttttggtatttttatgtg taaagaaggtaagtgtcaagagaaaagtttgctcgctgtttttgatgatt ttttgaaatttcgacatggaaaaaaaatacaattttacagttttttaaaa ataattttcaaactactttttcaaacctattgtttgatagctcaaaattc aagtttgagcatcctctatacaattaAAAAAggatgaacaaaaaatttaa atccttaAGCTCACAATATTTCGACAAatctgtatactttttttggtgca cccggtatatttactctaggggctgagttaggtcccatatgcgcatcggc gtatagtcattttttcttttgatcatgaaagtatagtccttgaagagtca gaaaacgtgtgtggcgctatttggatcaggcacaaatttccataatggcg gattttagattttcaaccctttttagccctcctgcttgaaaaaaaatttt tttttttaactttaaaacatagacatattatacaccaatcgatcacaaat tttatgctgattaagaaaaaggtcagaatcatggtctgaaaatttcgtta tctggagatatgaagcacttttgATTTCGattggttccagatttgcgtgg ctgtaacatttgattggcttactttatttttggagggtcttgcctaccgt tcaaataataaaattcagggaaagttttttttctacatgaatttcgaaat ccataatggcggattcaaaactttctttcgtcacatgggctcttaggcca aggacacttgtatagctatacaagtgtccttgcttaggctctgctagcct aagaaaaatatttttttgagcttaaaaccctgcataccatataccaatcg atcagataacaatcagaaattttatgctgattaagaaaaaggtcagaacc atggtctgaaaatttcgttatcaagagatacgaagtacttacgttttcta agttttgaaaacaaaagtacttcatagctcgagatagaaaaattttcaga ccatggttctgacctttttcttaatcagcataaaatttggaaccaaaagt agtcatttcaaaaaatcaaaatcgaaagtgcatcatatctccagataacg aaattttcagaccatgattctgacatttttcttaataagcataaaatttg tgatcgattggtgtataatatgtctatgtttaaagttaaaattttttttt ttcaagcaagagggctaaaaagggttgaaaatctaaaatccgccattatg gaaatttgtgcctgatccaaataacgccacacacgttatctggctcttca aggactatactttcatgatcaaaagaaaaaatgactatacgccaatgcgc atacgggacctaactcagcccctagagtgaTTGTGAGATTGAGAAACAAA TCTCTACTATATAATGTTTGcgacttttctattttttggaTGTGGTAAAA AAGTATTGTTATTGTTACTGTTAGATTTTACACAATTAGGCTCACTTCAT TCCAATggtaaaaacaactttcaaattctctcgGAATTTTTTCTGGAGAT ATTGGGGGAACTTGAAAGGTAAGGGAAAGGTCACATATTCACACAAAAAA GCACAGATTCACGTCGTCACGCAATCAGAAAGTGGATTTTCACATGCACT CACCCTAGCATGCATTTACagaaccaaaattttttttctgaaatttttaa caaaactttGATTGAAGAACTGTTCTCACCTAAACTTTGACTCCTTTTCT CATAGGATCACATGTTGGAAtgtgaaaaatttttgttatgCTGTGACTAC TGTACAGAAGCGAAAATCCCAAGAAAAAAGGTTAACATTTTTTACCTGTC TTTccctttttaccaaaaaatgtttaatcggattaaattttgAAGATCTA TTTTACAAAGCTTAATAATGATTAAATTTTCTGCATTTTTTTCCTGAATC AGTGTTTTGAAActtcagcaaaaatttgattttttgccTGCCTTTAATTT TTTAGTTCAGCCGACCCACacgaaaatggaaaaattagGTTAAATGCAAA ActaaattttgcaaaagtttatCTGATTAAAGAAAACTTGCTGACCCATG CAAAATCGTACTTTCTGTACAGAAACCAGGGGGGGTATcgagtcagtgta ctggcccaTAGCTGGTGGGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNagttagtacagtgtactaaaaagggtggtggt ctaattttttggaaaaaaatccaaaaatcaagttagtaccctatggtcca gtacactgacttggtACCCCCCTGCAGAAACCACTCTTGctgcattttct ttttttggaaaaaaattgtattttctggtttcaggttccttaacggTTTA TATCCACACATGGAAATCTTTTCTACGCTGACTTGTTGTATGTATAAATA AAAACAGAcagttttacaatttttttactgaaattGATCTGATTAAAGTA AAATATAACATTCACTTTATTCAATTTAGATGGACGGTCATATTTCAAAT GACTGTGTCAAAGTACCGCATTCTTGTCCATTCAAAACTATAGGCTGCCA TGAAAAGGTATTTCAGTAttctttttatacaaaaaaaacacataaaacAG GGTAAGAATCGTACCTTCTGTattcaaatcacaaaaattgtcaatttcTT AGATTTATTTTATCACTGCAAAGTCTGAAAATGTAAAGATTAATCGATTT CTTATGCTATGGATATTTTCTAGGAtcaagaattttcaattttatttgat aATTTCTTCACAGGAAAggtgatgcccaaaacttaacTTCATTTAGTTtc caaagaaatctttttttaaaccggaactccttaaaaatcgccagaacagt tGAAAGCCCAACAGGTTTCCTTAATTTTCCGAGTTCCACTCAACAGATTT TCGTGACTTTTTACACAATGAAACAAAAAGTAATTCCCAGACTGTGGCTG AGTccaattctcaaaaaaatattgGTCACCGGATCCGGAAATGTTCCGGG TCGGATTCggctgaaattttattttgtacaCATGCTCCTTGTTttttagc ctcaaaacgaggctaaaaactttGGGACAGGCTAGAGACCTCAAAAAGGT Ccggtttggctgaaatttggcacacttgttccttgaatgaatatctgggg gtgtttttttcgttttttcaaaatgttgattTTAAGGGGGTGGTCACAAG GTTTAGCCCAAAATGACGCTAAAACTTTTCTTTATTATCCAAAAGTTCTC TGTCgatgtttacaattgggcctacgagtataatttaaaggatactaaag ttgagccagtgcggttagcacgttctaCATAACCATCacttgtaaaattt atgaattcTTGCCGATTAACTGACTGATCTAACCAGTTCCTTCTCTTCTT AattagttttcttttttattgtttagcTTCTGTCAGGAGAGTTAGCCAAA CATAACCCAAGTTCGATTGAGAACCATTTGCTTCTGGCACTGAACCAAAT CAATAGACAGAATGAGAAGATAATAAAGTTAcaagaaaatctacaaaaag caAGTCGATCGCAAAATAATGCGTTGATTGAGCTTCGATCATCGTCTGTT TTTAGCCAAGTTCACGTTTTTAAGAttcaaaattttgctcaaaGTTTATc gtttaaagaatatttttattctCCTCATGGATACAAATTCAAAACTTGGA CCACATTAAATGGCGAATCTGATATTAGTCTTTGGTTTCAAACTGTACAA AGCCCTTTTGATGATGCATTAGAATGGCCAATGAAGCTAGAATATCTTAG ATGTGTCATCATAAACAAAAGACTCAAAGGGAAATTACCTCGCATAATGT GGAATGGAACCGATGATATGAATAGCCTCATTCTTAAGCCACCACACATG ACAAGTGTTGGGTGGAATCGATTTATCCGATCTCCGAAGCTTGCCTCTAT GATGATGATGGCACATTGACAATTcgcattgaaataaaatttcttgatga ataaatatttcaaaactNTGATGATGATGGCACTTTGACAATTcgcattg aaataaaatttcttgatgaataaatatttcaaaactgtaATACAGTAGAC TTTCCATAATTCTAACGGCAACGGTCCCAACGAATAAGTACATTCGACGG TTCGAGTTTTGGGGACTTTACTTTATAATGTGTTTACATATACAATAACT GTATCACTGTTTGTGATAAGAAGAATACATATTCATGCGTGATAAATTAT TTAACCCTGAAATACCCTGAAAATGATACTCCACAAAAGGGT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00052610TCONS_00052610Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00052610-proteinTCONS_00052610-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_218supercontigscaffold_218:669616..678457 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
21.78 20.02 7.89 6.37 1.21 0.9 3.92 3.86 2.97 2.21 2.44 2.05 2.41 2.84 4.09 4.02 4.79 4.32 2.06 1.59 2.48 1.61 19.44 16.79 4.58 3.88 2.4 2.48 9 11.3