XLOC_033278 (gene) - C. hemisphaerica

Overview
NameXLOC_033278
Unique NameXLOC_033278
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_218:360397..369837-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_033278 ID=XLOC_033278|Name=XLOC_033278|organism=Clytia hemisphaerica|type=gene|length=9441bp|location=Sequence derived from alignment at scaffold_218:360397..369837- (Clytia hemisphaerica)
CTTTAATCCTCTAAGAGCGTAAACTTTGAATTTTGGAATCTTTTTTCGGT AATAAAAGTAGGAGTGGCAAAACCGCCGTTTTTCCGCTTTTGTTAACATA TTCGGGCATCTGGTTTTCGGAGGCGAATAAAATCTCCTTACCAGGCCCTT GGCGTGTAGCACAAGACAAGAAAGGCGAGAATTTTGTGAAGAGGTAAAAA GTACCTCAAAAAATATTCATCAAGCTGTTAGAGGGGATACACAATTCTCC CTTCTAAAACCTTAAAAATATATATACATGGCTTTAAAAAGGATAACAAA GGTTGGTTAATATATACATTCAATTTTTGTTATGACAAATCGACTAAGGA AAGACCAGAGTCGTTTCAACTTTTGATTTGAATATTTTTTTGTTACTGCT CTGGGGCTCCATTCTTTGACTGTTCTGAATGTCGCTCGTCACTGATTGCT GATTAATAAGTCTATACAAACTAGTTTAGATTTTCAGCCATTCAGGGATA GTGACAATTTTTTTAACTAAGCCTCCTGGAAATCAGGGGCTGAACAACTT CCCTGGGAAGTACTTTTTGAGTGACAAAGCAAAAGGTGCTGAAAACAAAA ATCTATGCCTTTAAACTAGAGTAACCACTGGATACGTTGATAATCTAGAA CATGTTAAAAACCCCTTGGACGGTCATGTAAATTGGGCTGTTCAAAAAAT TGATAAAGTTTTTATGAGGAAAGCATCCCCTATAAAAGCTGACAACCTTC AATGACAGACTTGAAAAGTCAAAGATTTATTGACCCCTCCCCCTGAAAAA GTTGGTGAATACCCCCTGTATGGTTTTGAAAATGGAATAGCCCATCCCAT GCAAATTTCCAGGATAACGGTGGCAGAAACTCGATCTTTGCTTGAATCAT GAAACTTAATCCTATTTTTTGTACATGAGTCATGAGAATCATGACAAAAA TTTGATGTCCTAGGCCCTTATTAACAGAACAAGCCCATTCTGAAGTTAAT TCTTTGTGTTACTTACTTGTGTAGGTGTTCGAGCATAGTGCTCAGGTAAG ATTCTTGGTGAACCACGCCTCTATTTGATTAATCTGTCGAGGGAAAAAGA ATCGCAGTATATATTTTTCATGTCAAGTATTGAATTTAAATTAGGTCTCA TGCACCCAGTATATCCATGAATTTGGGGTTCATCCGGGATCGACTTTAAG TGAGTGTCAAGGGCATTTTTTAATTTTTCAGTTGAAGTGTTTGAAGTTGA AGTTTCTTATGCTCTTTGGCATTACATTGAATAGTTTTGCACCTCGTTCA GAAAGAGTGCAATCTCTAAGGTAGGATGTTTGATTCTTGAAGATAGACAG TTGGCACAGCCGGCCGAGCCGGGGATTTTCGTAAGCTTTTATACTGCTAT TCATGTTAGGTACTATCCCTTCTAACACCTTCCAAACATAGATGATGCGA TATAGCGTTCCCTTCTTCTTTGAAGGGAATAGATTTTGGATTGCTTGAGA CACTCCCAATACCTTACCTTGAGTTACCTTGAGCTTGTTTCGTAATATCT TTACGCATCCATCCTGTGAGGACCGATGTAAATTTTCATATTGATGATGC TGTTTGTTTCAGCTCGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNAGACAGTTCCTCCAGAATATTGCGAGTGGCTTAGCA AGTTCTTCTTTGCAATTTTTCAGCAAAATCGCAGGAAATCCATCAGGACC GGGAGCAGAGTTTGGTGGAATAATTGTTTGAGATGCCTTTTATCCTTCTC AGAAAGGATTTTTGAATGTCTTTGTGTCTCTAAATGGGCCATTCCGGAAA ATTTTTGTTACCCCCTGTCGGACAACGTGTATTTTTTTATTTTTTTCTAG CCTCGGAAATAATTTCTCTTTTCCAGTGGTGGTTGGAAATTCCATTAAAA ATTCATGTACTTTTGCAAAATGCATCGGAAATTCCACTCTTTTTTGGCCT TTTTAACTCGATTGCCTTGGAAATTCATACATTTTCTTCTCTCGCCTTGG AAATTTCGAATTTTAATGAAAACTTTTACCCTCGGAAATCCTGTGTCGTC CGCCCCCCTGTTACAGACAAATTCTGGAATGGCCCAATGAGACCAACAGT ATTTGGACTCCATAGAACGGAGCAATATTCTAAAATTGGTATCACCAACG ATTTGTAGAGTCAAACATTCAAATGACCGCGATGAAAAAGTTCGCAGCAT CAATGAAGCTTTTTGAATGGTTGAAATTAATTGTTCTTTAAACAAGCAAT CATTACTCATCAGGATTCCCAAATCTTTTACAACAATTTTGCTTTCAATG ATATTGCCTGATGGTGATGTATAGTTTGTTTGGTCCTTGATAAATTGATT TTGACCATATCTCAACAGTTCAAGTTTCATGTTATTGTCATCTGTCCATT TGTAAATTTTCTCTAAGTCAGATTGAAGTAAGGGAACATCTTCAATTGTC TTGACTTATTTTGATGCACGGGTGTCATCAGCAAAGGACTTCACAAAGCT GTTTAAGATATCTTTGTCAATATTGCCAATGAGTATAAGAAAGACCAAAG GACCCAGGACACTTCCTTGAGGGACTCCTGATAAGACCTCTTGTGGTTTT GACTTCACACCATTTACAAGCACTGACTGGGCACTTAAGCCATTGTAGTA TTTTTCCATCAATTCCTAGTTGCATTATCTTGTGTAGGACAATTGCATGG TCAACTTTATCAAAGGCTATCGAGAAATCTAGGTAGACAACATCTACAAT TGCTTCTATGTCAAGAATATTCAATATCAAGTCATATTGTTCATCAAGCA ATTGACTTAGACATGATATACATGTCATCTTCCATCGAAAGAGCAAACCT AGCTATATTTTCCTTTTTACTGTCATTCAGGAGAAGGGAAGAATACATTA AGCATATATTTGGCTTGGAACCATCAATAGTGAGACCCATGCACTTAGAC AATACAGACTTATCATGGTTTAGATCTCCGAAATTTTGTAAACATTCAAT TCAAAAAGCATTCAGATTTTGGGAGCAGTGGAATGTCTTTTTTACTTCAA CTTGACCACATTTCCAAACCTTTTTGAACTGAAAAAAATGGTTGATATGA ACAGACCATTTTTCATCCCCTTTTAGTGTCCGGTTATCGAGCGCTGCCGC TCCTGAAATCGTTAGAATTTAGGTAAATCAGCATTTTTGATAAAAGGGTA ATTTTCGCAGTTTTGTCCTATTTTGGACACATTTCTTTCAATTTCCTTGG GATCTTTTAAATTTTTTGATGAAAAATGGCAAAATTTATAATTTGAGTAC ATCTGTACATCCTGTGCCCAAGTTCAGGAGTTGCCATAAAGCCATTATGG TAATAACCGGGAGGGTACATTGCTATACATTGTAATTTTAGTATTCTAAT TTTTCATGGTTTTGCCGAAAAACCACCAAAAAAGTTAAAAATAGTTCCCG CAAAAATTAGTGCTTATTAAAGACATGTACTTATTCTTTGTATTCTGCAG GAAAATATATCACGTTTGATCCCAGCCCAGGGATTTTTCTAAGCACTTTG AGCTAGCTGTGGCCATTTTTGTAAATTTGGCTCTGTTGGGGGCTTAGAGG GCAAAGCTCTCAAAAAATTTTGAAAATGTAGATAGTATTTTAGGCTTGTA AACAATGAAAAAGTCAAATTTTGCTAGAAAATGTTTTTTCTACATTAAAA GAAGAAATTTTTGCGGGAATTTAATTTAACGAATGGCTGAAAAAAATTTT TCAGAGGGAATTTAATTTGGCAGATGATGGATACTGACGGAACTTAATTC CGCACATTTTGGCCAAATCCGCCAATTGTCTCCTTCTTTTTACATCAACT TGTATGAATTGTGTTTTGTATTATCAGGGGGTTTTTGCCATGCATAACTT TTGATCTAGATCAGCAACTTTTTGTACCAAATTTGGAACAGTTGTTTCTT CCATGATATACTCATAAAATCCTTTCAACTTGATGATGTCATCATGAAAA TGACATTGGCAGCCAACCTATAGAAGACCTCAGAAAGGCGTCAATTAAAA AGCAACTAGAAAAGATTTGTTAATTCTGTTTTGATTTTCTAAAAGTTAAT AGAAAACTCAATAATATATTTGCTGGTTTATCAATTTTGAATTTTGAAAT CTATGCTGAAGATGAGTAAAATCAATTTAAAGGGACATAAAAGTAGTAAA ATTTAAACATTGCGCAAGCCACGTGTCATTAAAGAGAACAATTAAAATCA CGTGTCCAAAACAAACTTGTAAAACAATGGAACAATCAAAATTAGCCATA TTTGTTTTGATTTTGTATCTGCTGCATACAGTTTGTTTACAAATTTCACA AGTACTGTTATGTCCCTTTAAATGATATGTCATCATTTTTTGCAAATTTT TTTAGTTAGTATCTAAGACCGTTTTATTTAACACAATTTGGGTTTATGGC CAATGTTGGTAATAAAGTCATAAAATATGACCCGGCTGTTTTTTTTTTAC TTAAACTTTGGTTGGCTTACACATTATAAATTTTGTTAATATCCTATTCT AATAGAATTTCAGGGAGTTTTAAGCAAAAGTGCCAGGGAACATGTAAAAT ACCTCCTCCCCCCCCCCCCCCCCNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCCCCCCCCCCCCCCC CCCCCTTCCTGTTAAAAATAGGGTTTAAACTTTGAAATGAAAGGTATTTG GCAGAAAAAAAATCAGATATTGCATTAATAAGATTATAGAAATATTGATA AAAATCCACCCCTGGATATCTTTTCAGAAAGCACAAGATCGATATGTAGT TCAAACTCTATCTAAGATGGAGACTTATGTCTATGCTGAAAATTATATTT AGACAGACTTCGTGTTACAAGTGATATGACTGGCCCCTACATAAAATATG TAAAGGGAATGAGAAAGTGAGAAAGGAAAATTAAACTTTTCAGTTTTTTG AAATAAATGATAGCATATTGATCATCAGCTAGACAGGTTTCAAGTTTGAA CTGTCTTTCTTTTTTAGGAATTGACAGATTTAGGGAGGGATCCACCAGCA CAATGTTCAGCTGGACCTATAGATGAAAAAGATAGTAAGTATTCATCACA GGAAAAAATCCTTGAATCACATGCGTGTGAAAAACAATTTCCGAGCATGT GATCCTGCAAAAAATCACATGCGTGTGAAAATACAATTCACAAGCCATCG TTTCTCGACTTATTAAATGGGGTGTGACTAGATTTAAAATCACAAATAGG ATTGTTTGTCTTTCTTAGAGAGAAAGGTTTAATACCCTGAAAGTAACTCA CTTCTATTCTATTTAACAAGTGAGAAAAGATGGATTGTGAATTACATTTT CACACGCATGTGATTTTTTGCAGGATCACATGCTCGGAAATTGTTTTTCA CACGCATGTGATTCAAGGATTTTTTCCTGTGCATATGGTTTGTAATCTCA GTGGTTTATGATATTGACACTAATTTTTTACAAAAGTCTCAAAAGCTAAG TTAACTATGATGTTTCTTTCCAGGCCCCTCAATCCTCAATGTAATTATTA CATGGCTTCCATCTGGAAGTTGGAGGCTGATAATTGTTGCTCATACCAAG GGCATAAAACCTTCAAGAAAACTACACACAATTCTTAATAATCTTTGTTT TCAATGTTTAACAGCTCTGATCTAGTATCAAGCACCTGCGACATAGTGTA GCTATCTTCAAAAAAAAAGTCTGTAATTCTGTGTAATTATGCAAACTAAA AATCGCTTGATAACAAACAAATTGCAAGAGTTTGCAACAAAATCAGTTAG AACTGAGTTTTTTTAGGCACTTGCAAATTTGTCTGCAATTTTTTAATAAC ATTACAGAAAGACTTTACTTGCGACATGTGTGCAATTTCCCATATGCTTG CAACGAAATGTAATTGCAGCTGTATGCAAAACCTTTGTTGCCTCTGCTTT AGGCTATACAAGACTAGCAGGCAGGAATTTTGTAAATTTTTGTGAGTTAT TAACATTTAGCATTTTGTGTTCATTTTCCTTTCAGTGTTTAAATGGCAAG CTACTATAATGGGACCAGTAAGTGTTAAGCTCTTATATAAGTTCATTTTA TTTTTATTTTAATGGTCTGTTTCAAGATAGTTGAAATTTAAATTTTTTAA ACTGTAATTTAAAATTAATTATTGGATTTTATATTAGGATTGCATTATGA CTAGCAAAATATTCCTTTTTTCAGACGGAAAGTCCATATCAAGGTGGCGT ATTTTTTCTTACAATCAACTTTCCACCAGATTATCCTTTCAAACCACCAA AAGTAAGTGATCAATTTTTTTTTTCACTTTGGTCTTCAACATGCATTGAT TGATATATTAAATGGAAATGCAGATTGATTACCATAGTTTTTCTTTAAGT TTTAAAGATTTCCATGCCTAAACCTTTTGATGTTTTTAGCGCTTAACCAT TTGCTTAATCTCTCACCTGACTTAATAATCTCTGTGAATGCTAATTGTAG AATTTACAGGATTTATTTTGGTTTTGTTAAGAACAGACACGTCTTGTGAC AGTTTTGCACTGTCGTTAAAGCAAACAAAATTCAATATCTATTTTGTACT TTAGGTCACATTTGTTACAAGAATATACCACCCCAATATTAATAGCAATG GAAGTATCTGTTTGGATATTCTAAGACAACAATGGAGTCCTGCTCTAACA ATATCAAAAGGTATTTATGACTTTTATCATTTTGGATTCTCAGAAAAACT TGTTAAACTTTGATAAATTCATTGTAAACTTTTGCTTTGTTAGCATGATT AAACATATGCGTGAATAGAACGCCTTTATAAGAACGCGAGGCTCAATTTT GGCAAAAACCTAATAAGAATTAAGAACAATTTAAGCCCCATATGTCTGAA ATGGCTAAATAAACCCAAGTCGATAAGTTGATACTACAAGCACGTTAAGA ACAATTGAGCTTGGGGATCACAAGACAATTAGAAATAGCAGATCCTGATG ACAAATTACCTGGTTCTTATAAAAAGTGTGTATTAACTCTGTGCTTGAAT CATTTTATTCTCTAGATAATCCTAGCGGATACAAATACTTACCTATTATA TAATTGAAATACAGCTACCGTTTTAATTAATTGCTTCATGAGCATTCTAG ACCATTCTGGATCAGACAATGACCTTTGTTTTACTTTTTTTATTTTAAAA TATGCTTAAAGCACGCAGGATCACGTTATTCTTTATCATGATGTTTGGTA TTAAACAACTCATCTGCGTATCAGATATTTGTAGGGAGCTTAGTTTTTGC TCAAAATGGCAATACTTTTCACATCACACCGCGCTTCATTATAAGACCTT TTCACCATTCTTTTTTCTAATTTTTAGTACTATTATCTATATGTTCACTA CTGACGGACCCTAATCCTGAAGATCCATTGGTACCAGAAATAGCAAGAAT CTATAAAAGTGATCGTTCTCGATACAGTGACCTTGCAAAAGAGTGGACCA AGAAGTATGCCATGTGATCGGTCATCTAACTAGTAGCCTTCGTTTAACGA CGATTTAAGGTTCTGGAAAGGAGGAAAAGTGTAGAATCTAACAGCTAATG AAGTCTTCGCATTGTTTTTTTATTTCGAAGCAATTCTAAGCTTAATGAAG CATGTATTGTATCTTTAAAAAGGGATTATATTGCTTTACTCGGTCGAACA TTTTTTGTCTGTAAATTATGATAAACAAATTTAGTTGACTTTTATTTTAA GAAAATTTTAGAATTAAACTTTGAAAGATTTTTTTGTAAATTGACGGTAT CTATTTTCCCGATCATCAGTTCTTTGTTCAAGTTTCAAGTTCCAGTTTTG ATTGAAAACAACCTTCTCAGAATAAACAACGTAGAGAAACGAAGCCTTGG CAGATTATTTTAATTGTACTGGAGGTCAATTTTTTCTTTAGAAATCTGTT CTCTTTTAGCTACACTGATAATTGGTAACTTCTTTCTTAGGAGCCTTTAA CTTATGTATCTTTCAAGATTTGTTTGTAAAAGAAAAATAATTGTAAAGTT GTCGATATTCATTTTGTATTTTCCTTTTGAAATAATTTGGCTGATCATTC TAATTTCTCATCAATTTATAACTTAGAAATTTAAAACAGAA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00052673TCONS_00052673Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00052673-proteinTCONS_00052673-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_218supercontigscaffold_218:360397..369837 -
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
UBE2D4PREDICTED: ubiquitin-conjugating enzyme E2 D4 isoform X1 Homo Sapiens
UBE2D3PREDICTED: ubiquitin-conjugating enzyme E2 D3 isoform X4 Homo Sapiens
UBE2D2PREDICTED: ubiquitin-conjugating enzyme E2 D2 isoform X1 Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
706.88 697.88 940.83 980.36 143.41 110.96 264.66 275.59 365.13 313.58 362.21 391.3 468.61 490.74 405.69 421.18 384.51 439.6 215.98 240.56 532.84 490 567.6 525.58 368.8 427.19 401.09 389.13 418.36 409.96