XLOC_033333 (gene) - C. hemisphaerica

Overview
NameXLOC_033333
Unique NameXLOC_033333
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_219:78400..83117+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_033333 ID=XLOC_033333|Name=XLOC_033333|organism=Clytia hemisphaerica|type=gene|length=4718bp|location=Sequence derived from alignment at scaffold_219:78400..83117+ (Clytia hemisphaerica)
ttagggTATAATTGGCAAAGTCACAAATTTGATTGTCCCAACATGGATTA GTAGCTGGTGGAAACCTGATCTAGCCTCAAAAGTAAGTTTAGATCATATT ATGTTTTTCATTCTGACAAGCCAATTTGGATACTGGTTTGTTGGATCAGG CAGCTCTGGCAAATTACGTTAATTAATGTGTTGCACTCAACTTTTGATAA AGTAAAAAGATGATTGTTGATAAAATGGGACTTTCAAATCAAGAGCTATG GGTACTTAATATTAAATTTCGGTTTATATCTACCTAATATTAAATGTTTT TCCATACCATCAAATTACTTTTTGAGGTGTGTGAATTCTCCGAGATGGTT GATTGGATTGGACTTCATAGGATACCTAATCACACGACCTTAATTCTAAA GCCAGGATTTTTCTAATTGACAAAGCCTGATTTTTTATAATACAAAAGCT CTCTTTTGAAGACATAAGGAAAGTttcaaaaagataaataaaattttaca attttataaaGAGAAAAACCAGACTTTGTACCTTTTCTGCAAGCTACATG TTTCCTAATTATAAGCCTCATTCTGAAAgcttttcaaaaccttttttgca TATGCTTAAAGACACAAGTTTTACATGCTTTAGATGTATGATTTTCAAGA TTATGGGGTTAGAACTAAAAGGCAAAGGTGATCAAATCTAATGATGACAT ACCTTaattgtaattaaaaaaagCTGAACTTTGCTCGCTTGTGTTTGATT TTGGGGGTATTGAGGCTGGGTTGTCAAGGTGATTATTGAAAAAGATTATT CTTTTTATGATGTAGAAAGGAGACACAACTCTGTGATGAcaaagcaaaat aaacaaaagaatttctcaaattttgtgtGGGAACAAGTTGTGTTTAGAac tgctgtgtaagcaaatttTAAGGGGTACATTAAATGATGTTATTTAAATg cttttaaattttatcaattttctaatTCAGAATGATGGAAGTGAATCAGC TGATTCAACAGATGAGGAAGTTGGGGATGTTGAACAAACTCTTTCAAATG GAATTACTCCGCACATCAAAACCGAAACCTTAGTTCAAGACCACTCATTC AAACCAACTCAACCTAAAATTTCAGTGAGCAGTCAAAAAGAATTTCTCTT GTCAAATCGAAATTCAACAACACAATCTGAAACCTTCTCACTTTCAACCA AATATACTAACTCTACAGAAGCAACAACAAAGAGCATCGAAATTTCTGAC ACTGAAGAGAATCAGCAACAAAACCCAGTAGCTGAGGAACCAGCTAAAAC CTCGTTCTATACAAATTTACGTAGCCAGAGGGGACAACCATTACCATCTA AACCAGCATTTAAAGTGTCTGCTTTTGTGTCGCCACTCAATCAATCTACA GCATCTACAAATGTCTCGTTCAATTCGTCACTCAATGCATCCTCATTCGA TTTCTCTATGTCTCGATCACCATTTTATACTGGTGGTACAACCTTTGGTG GTGCTAATTCGTATCGTGAAACATCTGGTAAAAGGATGAAATTATCGCCA GTCTCCAATCGAGTACGAACAACAAGGACACTGATGAAAGCGAAGCCACT TCCAAATACTAAGAAAAACATTGTTACAAGTCAGACTGCTAAGCGTATTT TAAATACTCTTGGAAAGATGTCATCGCCGGTGAAAGATTCAAAGAGAATC CCACGGTCAGTTTTTACCAAACCTGCATTGAGCGAACTTGTCAAAAACCA AGCAAAAGTTGTGAGTCGGCAATCTGAATCAGTTGCTCCACCTGTAAGCT CTTTGAATAAACCTTTAAAAATTGTTAGCAAAccagaaaactttcaaaac aagatgGATTCTATTCGAAGGTTCAATCAGAAATCTGAGGTAAAAACTCA ACCAGCACAAGTACCATCGTTTTCATTCAAACAACAAACTGTTCCTCCGT TGGTTGCACCACCTAAGCAAGAGATAAAGATCCAACAACCTCCCAAGTTA CCCACGGCTGAACCTTCCAAGTCTAGCATGAAAATAAAACGAGATAAAAT GACCTCCCATTTCACCATGGCTAAAGAACCAGAAGTAGTTAACAGTATGC CAGAAATTACATCTACTGCAGCTCCATTACCCATCACTGTCATGCCCACA TTCAACTTTGCAAAAAGTgctttagaaaaacaaaaagccAGTAACATATT TTCACCGTCCTTGAACGTTACTCCCATTCTAaaaccaacacaagaaaaac aGCAAGAGATAAAAACCAAAATCGAGCCACCAATACCGTTTGAAATCCCT AAATCTGTAGAGGTGACAAAATCAACCGATGGGTTTACCTTTGCTACGCC AGAAGTTAAAGGAACCAAATCGTTTTCGACACCTCTCTTAAAAGACTTTG TGTTTAGTACACCTGTTAACCTTGCTAATAAAGCTAAGGCGACTTCTGAT ATACCAAAACCAACTGCAAAGATAGAAAAACTTGTTGTTTCGACCCAACC NACCAAATCGTTTTCGACACCTCTCTTAAAAGACTTTGTGTTTAGTACAC CTGTTAACCTTGCTAATAAAGCTAAGGCGACTTCTGATATACCAAAACCA ACTGCAAAGATAGAAAAACTTGTTGTTTCGACCCAACCACCAATAAAACC ATCTCCAGCACCTGTGATAGAACAGATCGTTAAACCGTCCACAACAATTA AACCTTTCAAAgaactaaagcaaaacaatgatAATGCAACTTGGAGTTGT CCAACTTGTATGATAGACAATGAAACAACTGATTTGAAATGTGTTGCGTG CGAGACAGCAAAACCTGGATTGGCTTCAGTAGCTTCCACTGTTAAGTCAT CGGCAAAACCAACTTTCGAAATCAAACcattaaaaaatctttcaaagccT ATAGAAGATTGGAATTGCCCAACTTGTATGATTGATAATTCAAATGACGA TTTAAAATGTGTAGCTTGTGAAACTGCAAAACCAGGTTCTAAGTCTGTGT CATCAGAAACTTCGTTTAGCGGCTTTGGGAAATTGTCAGAAACTGGAGTC AAGCTACCTACCGATACTGGCTTTAAATTTAATAGTGTTAGTACAACTGG GTTTAAATTTGGTAATGATAATTCTAGTGGTTTTAAATTCAATTCAGATA GCACCACGACAGGGTTTAAATTCCAATCAACGGAGAACACTGGGTTTAAA TTTGGTAATGATAATTCTAGTGGTTTTAAATTCAATTCAGATAGCACCAC GACAGGGTTTAAATTCCAATCAACGGAGAACACTGGGTTTAAATTTCCCA CAAAAAGCGTAGACGAACCATTCAAAGGTGATGCAAGTGCCGAGAAGAAA ACTACTGAAGTTTCCGAACCTTCAAAAACAAACAACTTATTTGGTAATAG TGCACCTTCATTTTCGTTTGGTAAACCCACTGAGACTGAAAAAGCTCCAT CATTCGCATTTGGTAAACCATCAGAGACTGAAAAAGCTCCATCGTTTTCT TTTGGGAAGCCAACAGCTACGGAAAAAGCTCCCTCGTTTTCGTTTGGTAA ATCGACTGATAATGAGAAGGCTTTATCGATTTTGAGTAGTTCGACATCCA ACGAGCCAGCAGAAGTAGAAACACCAAAACCTGCGTTCGGGTCGATTGCT GCAGCCGCTGCGGGAGGTTTTCTGAAAGTCACTGGTTCATCATCAGTACC ATTTGAGCCAACAATTACTAAAACAGACCCACCAAAATCAACAGGGTTTG CATTCGGACAAGCATCGTCCCAATCTGTTTTCGGAAGCACTTCTTCATCC CAATCAGTGCTTGGTTCAACCTCCAAAAGTGAATCCCAGCCACCTGCACC ATCTTTCAACTTTGGTCAAACCAAATCTTCAACAACAAGTTTTGGTTCAA CATCCTCAGTTTTCGGGCAAGCTTCAACCGGTTCAGTATTTGGTACTCCC GTTCAAAGCGACTCGCAATCAGCCGCTCCATCATTCAATTTCGGTCAAAG TGTTACACCTGCTTTTAACTTTGGAGCTACCCAAGAGAAGAAAGAACCTC AGAAAACATCTCTTCCCAGCTTCGGATCCAGCCAACCAACCGAATCATTG TTTGGAGCAAAGAAACCTGAAGCTTCTGCTCAACCACCATTCAACTTTGC AGCACCATCCAAACCTGAATCTGCGCCAGTATTTGGATCAGCTCCAACCC AACCGGCAGCTTCTTTCAACTTCGGTGCTTCCTCGACCGTACCATCGTTT GAGACCAAACCGTCAGGCTTCATTTTGTCAGCGAATAACAGTGCAAACCC TACTGTTAGTCAACCGCCTGCTCCATCAGGAGGATTCAATTTCTCTGCAC CAAATGCATCCTTTAGTTTCGGCGCGACGACCACGAACGGAGCAAGCGAT GCTCTAAAAACTGGTAGCGTTTTCGGACAACAGAACACTTTTGGTGCATC TAATACAGGAAATCTTTTCGCAATCGGTCAAGGTAGTAATAATAGTAACA ATACATCTAGTGGACCAATGAAAAACAGACAAATCCGTAAAGCTGTAAGA CGGAAGAAGCCGGTTTAAATATTAGTTAACtttagtttttatattttgat tttattaacaGTACGTTCTTGTTGGTATGGCTATTCATATGCTTACTCTA CACTACTGGATTTAAAAACTTCTTTAGAAATTCTGTGAATAGAATGACGA TGAATGACTTTAGGCGTA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00052730TCONS_00052730Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00052730-proteinTCONS_00052730-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_219supercontigscaffold_219:78400..83117 +
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
NUP153nuclear pore complex protein Nup153 isoform 1 Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
15.16 15.27 20.8 27.44 85.62 68.1 35.96 41.13 19.39 30.38 21.02 17.12 14.13 15.3 15.51 18.06 23.64 19.96 8.09 9.07 16.75 16.64 50.53 45.76 28.29 30.58 10.97 9.92 62.74 72.27