XLOC_033381 (gene) - C. hemisphaerica

Overview
NameXLOC_033381
Unique NameXLOC_033381
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_220:508443..520154+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_033381 ID=XLOC_033381|Name=XLOC_033381|organism=Clytia hemisphaerica|type=gene|length=11712bp|location=Sequence derived from alignment at scaffold_220:508443..520154+ (Clytia hemisphaerica)
GCGACTTGACATaagggagtttgacatagtctGAGAAAAAAGAGCTACAT GCACTAAAAAATGGTGTAAATGCCAGGCTATTGAACCGCGAATTTTTGAC TACATTCAAAATTCGTATTTTTTGGCCCTTACAAATTTCTggatcatttt gaaatttattttcaatcccTGTAACAAATACTGACTCTCTCACAGCAACA TAAGCTATCAACTGATCAAGAGTACAGCACCATCAAATTAAATCTCCAAA CATTCAACATAAAAAAGGTATATCGTGTTAAATAAAATAGCCCAGGCAAA GAGCATTCATGATCCTCTTTTTTTTGTGTTCAACAAAATGTGGCATATCC GAAGGTTCTAAGCTAGTAGTTAGTATAATTTTGACTTTGNACAAAATGTG GCATATCCGAAGGTTCTAAGCTAGTAGTTAGTATAATTTTGACTTTGATG TACCGtgagaaagggtaacttgcatcagtggaggctaacatgcatagccc tcaaatgaatgacctggctggtcattaaaatacacatacgtagctccgct cgcagctctactctaccatatttttgtttcaatttattttcgtattttaa tgaccagccgggcctttcatttgagggctatgcatgttagcctccactga tgcaagttaccctttttcacggtatacTATTGGCTTAGTTGTTACAAACA AACTCAGTCAGTAAAAACATGTTCGCTTATgttatccagacggtgtcaat cgaacgaatcgaacgccgaatcaatcgaacgcaattgaacgcaatcgaat aattgcaattcgattgtcgaacgcaatcgaatcgcaatcgaatattaccc aggatttgctgttcgattgcttcgattacattcgattgtattcgattacg tacgattgattcaattgtattagattttattcgctttagtgtggtactta agcgctcggccgcccacactaagaagctctaacagagtgatccaatttaa tttaatcgtaatcaaactcatcgtacataatcgtaatcgaacgatatcga agattaatccaatgtaattgacaatcaatcgaaccaatcgaacatagtca acaatcANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNacgttcgacaatcgaatcgcaattattcgatcgcgttcg attacgtttgattggttcgattgcgatttttgttcgaagttgttcgattg acaccgtctggttatgTTATGCCGAAGACTTTTCGTATTCCCAagccaat aaaaatatttttagctatcatcaaaggcaaaaataataacatctaCGTTA TTCTCAAGAgcaattaaaaatgacaaactttttttctttgtttgtaaCGC ATTATTTCATCAAACAATCAGAAACAACAAATTGTTGTTTTAATTGCAAG AGAGAATACTAGACAGATGATTGATGCAATAAAACGAGCCGCAGCAACGG GATTTCATTTGTCTGCAATAAGGCGTTTGTAAAAATAAGTGTAGTGAAAA CTCGTTAAACGGAGGTTAGACATCACGTCTGACACTCTGTTGGCTAGCAT ATGTGTGTCATgtttccagacggtgtcaatcaaacgaatcgaacgccgaa tcaatcgaacgcaattgaacgcaatcgaataattgcaatttgattgtcga acgcaatcgaatggcaatcgaatattacccaggatttgctgttcgattgc ttcgattacgttcgattgtattcgattacattcgattgattcaattgtat tagattttatttgctttagtatggtacttaagcgctcggccgcccacgct aagaagctctaacagagtgatccaatttaatttaatcgcaatcaaactca tcgtacataatcgtaatcgaacgatatcgaagattaatccaatgtaattg acaatcaatcgaaccaatcgaacatagtcaacaatcaatcgaaccaatca aaccttactcgaacgcaatcgaatattacccaggatttgctgttcgattg cttcgattacgttcgattgtattcgataacattcgattgattcaattgta ttagattttatttgctttagtatggtacttaagcgctcggccgcccacgc taagaagctctaacagagtgatccaatttaatttaatcgcaatcaaactc atcgtacataatcgtaatcgaacgatatcgaagattaatccaatgtaatt gacaatcaatcgaaccaatcgaacatagtcaacaatcaatcgaaccaatc aaaccttactcgaacgcaatcgaatattacccaggaatcggccgtttgat tgagattcgattacgttcgacaatcgaatcgcaattattcgatcgcgttc gattacgttcgattggttcgattgcgatttttgttcgaagttgttcgatt gacaccgtctggatgtTTCTGCCAAgccccccttaaaataaggggggaat attgccttttgaaaaagggaggatttttgtaatttctttttaaataagtg GGGAATTTTATCAAGGGCTGCGCAAGAATCtatcaaatcaagaaaaaggg ggaactaaaatttgaaaattgttgaTTGGATTGCAAATTTCTGTTTCTGG TTTTATTGATAATGGAAATACCCAGGGGCtgaggggatgtcaatcgaact caatcgaattcGCTTTGGAGTCGAATCGATCAAATTCAATCGAAGtaaat cgaagtgattgttcgaatcaatcgaactcgatcgaagtgattgatcaaac aatcgaattcaatcaaaatggaaaaaagatGTAAATCTTCAATCGTCTTC GATTGGATTTGATCTATTATTCGATCAATCACTTCAATTGAGTTCGATTG ATTTGAACAATCACTTTGATTTACTTCGCTCGATTGATTTGATCACACAT GGTGTTTTCTTGTTCGGGCTTTTCATTAGTCTACTAACTAAAaaggatgt caatcgaaaatgTCGAATATAATCGAgaccaatcgaagtgattgaccgaa tcaatcgaagccaatcgagtacaatcaaaccaaatcaatcttaaaatgat gtaaatcttcgattgacttcaattTTTTCGATCGATCACTTCGATTGATC ACTTCGATTGGCTTCGATTTGGTCAATcagttcgattggtttcgattata tttgattggttcgacaatcGAAATTTTCGATTGACTTCCCCTGGAAATAC TATTATACCAAGACAAGTACAagggcagttagtcacactagcgtcccacc aaaatgtgtatcaaagataaatgctgtgaaagcgctatatcgtttacttg actcgcaagcaaaaaaatgcgccgcaaaacttctaaagggattcatgaat aaaaaataacccggcactttttaatgaaattaacattttcaaaaacaatg agAAATTGCTTATATAAAacttgagccatagatgaaaaaatttgaaccaa gccaaccttgaaaactaatttgaagatcaacttcccaagaaaaagatcta cgggggagacagAACCCACCTAGATTCGCGCACCACCAGATAGGCTATTT CTCAGAAATTTTGCTGGACCTCAAACattgacccatttacatgtgcggaa ttatttttacggaattgaatgacaaaatttggttggttgatattctggtt GTTGCACGTTTGCAATCGGTTATTTTGTCTGATTTAAAggtttcaagttt taattaattgtcttgggaacttgaacttgattcaggtaactctcatcctt gttgttgcaaatacatcctgtagatgatactgatattgtttttttctgaa agcttgatttcctagtgtgactaactgaaggAATACTGGTAATTTTGTTC AATTTAAGGGAGGAGTTTTTGTTAAgggcaaaattgcattttaagggGGA ACTGAAAAAGTAGGCAGAAACCATTTGTGTGTGGGGCACCATGTTTTTTA TCTATGGGAGTGTTTTAAACGACGTCGGGCTCAATAGGATCGATAATCGG AACGGATCAACTTGCTTGATTTAGATACTAAGGGATCAACAGTATAGCCC TAActcttcatataaaatttacggGAAaggcatatttggactttgtaccc aatgCTGCACACAAGCACTACTTGCTAAAGTCCTACAATACATATAGGat aaaagtcagttttttgaagtttgcaaaaaaacgccacataaaagatcttt caaattcagtacaGTATGTGAATAGACAGCTTTGGAAATACTGTGTGTTT TGTATTTGATAGTGTACAATAAACTCGCATTCTTTTTACGCCCCCCTGAC AGCTGACAATTAGGCTATGgataaatttacattttttctctttcCTATTC TAGCAATGAAATGCTTCCATAGTTGACACATAATACACATTGACAGAAGT ATTCCCCATGTAatgtttatattgaaatctgcaataacgaaagtggtctc ttcttctCAGTGGCTCGTAAGTCGCTCCATCggaaagtcttttttaaatt tcatccaATGAGATTACCACGTAGGATTAAGGTAATGACTGGCCCTAATT TTTGGCGCTAATGGCTTTTTGGTTCCTTGGATGTCGAGCAGTCatataac tttatttttttcaatcgtTGATTCTAAggattgaattttttcttatctta aGTTCTCAAACGActgcgggaatttgatgcaagtattattttttcaaaga atcttttCTGATTGGATTGGataattctttttaaacaatTGCACAGCTAT TCTTCGGttggacaaaataaaacaatcgaTATTGCCGAGTTTGGATAGTA AAATATTTGGTACTTTCACAAGTGTTTgcaattgaacaaaaaataaaaca atttataTTTTCCAGGGGtgaatttttaagtttttcttctaATTCTTCAT GTTCGCCAATCCCCCAGTCTTCATAATATATACCATGGTAGGAAAGTTCA TGAAACTTAATTTTGAGTTTGGCAACTCCCCAAGATTGGCAAACAATCAT TTTTTCCCACTAATGGCTTttctcttttatcttttattggtttcttttgt tggTTTTTTACGTCACTATTGACTTGTGCACCATTTCTTGAAATGAAAAC Acactgtatttcccaagctgatagagcagtaaaaaatacaaattttgcag gtatttttcctttttttgcaaaagttgcagaaatgaaaataatgttaatt gaatactatccactgatgatccccAGCACTATCagaaagctagaatcgct ttgcgtactattcgcttgagaaaaattatgaaaaatactaATAAGCTTTG GACTTTCCAACATCCCTCTGGAACTAAATCCCAAATAGACTATGTCCTTG TCCGAAATAAATGGAAAAACAGTGTCANNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGGG CTCGAGTTAGAAGAACTGAAAACAGTTATGTCAGACCGTGAGCTGTGGAA AGAGAGATACTCGGTATTTCCGACCTAacggtcgaaggatgatgatgaga AAAAGATTGacatattaaaattttttcactcATGTGGGAGCTTACTAGCA TTAAGCCTGGTTGGCTTTTTTaactcggctcaatcctcaaaTCAAACTGC ACAAAATGGTTGAACTTTTGCGGCTGATCATttcaatggaagttgttgga atcttccttcttgacagaaaatcctttgtttaaTTGTCAAATGATCATAG TTacttttgttagatctgacaaattgatgttagTGAGTGCACTTTATACc ctatagttttgattcccattgaagaattaTACTCTGGTTTTCATGTAACT AAATGCTGTTtcagagctttagagctagcctgtcaTTTTTGCAAAGTNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNattat ttgttaggttaatctaattgtgttatcatttgataacacatgataatcga gccccattccattctctttataaaacataaaacttattAACACAATTATA GAGCAGCTAAATTTGTTAGTACttctttgccgacctaaacaagctactta ggacggctttgccgacctaaaatgacctctaggtcggcaaaatttccggT TTTGGTCTGCACTTACGTGCTGAtatgattttgtctgaattcacaGGGCT GCGTCTATGGTCTTGATATTCTTGATCACAAAAcaagatgtttttcaatt tgaattgattttggtgagtcACCCCCACGNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNccccccccccccctcaagcataaaatgttAGTATTCA TTAATAGAAAAAAGGtgttgagaaaataaaaaaagataacttAACTACTC GAACCGTCTATGGTCTTGATATTCTTGATCACAACATCATCTCATAAAAc aagatgtttttcaatttaaattgattttggtgagttccccccatgcctag aatgaaaattttccatccccccCTCCTTTTCCCCCACCCTGGCTTCTTTT TGACCTCAAAACTCAttcccccctgaatccaggggggggaggacactatg aacgACCCGATGTCGTTAACCTTTTGTCCAGGGCCCTTTAGTTACTTCAT TCTTAAGATTGTATGTATATGTGGTCTGATATTGATAGGTTATCACTTCC AgactgaaaaaattctttgagaTGTTGGTAAAATTATTGTCAACAAGTGT TTTGTTTGATTTGGGGGCGTTATTCTTGTTGGTGTAGAGACGCATTCCTC CCTATTTTGATTTAGTTGGGGGTGTAGCCAAAGATTAAAGGATTTCGAGG GTTTTTTGTGAAGCCAGCTTCAGAAACTCCTTTGAAATTAAGTTCTATAT CACAAATTTTTACAAGTGTTCTAAGTTCTTCCACCTTGTGTAGGTTAAAA GAAGCGATCCTCAAACGCATTAGAGATAGATACTGAGAATTCTCAATGTT GAAATCATTTGTTGCCTTTGGAACAGAATCATCTAGGGAAGGGTCATTAC TGTCCATGGGTTACAAGGATATATTATTAGGTGGGACTTTCAGtcctttc aaaaatcaaaatcgaagtGTACATTTTCAGACAATGACATAGctatattt tcaattaataaTAAANCTTTGAGATGTTGGTAAAATTATTGTCAACAAGT GTTTTGTTTGATTTGGGGCGTTATTCTTGTTGGACTTAGAGCAGCTAGAA AAGTTAGAAttaacaaaaatctgcttatcTTTTCATGGGATTCATATCTC AGTAGGTTGATGTTAAAGTCATTCATAATTTACAAAAAGCCTGTTTGTTT TATTCCGAAATTGTTTTCCAATAGTTTGGAGTAAAGAACATTGAATTATG CGCTATCtatattaaagtctgtctcaaaataatttgcagctgagacaaaa atggctgtaacttttgatagaattcaaatCAAGTTGTGATTTTGtgctca ttttttcaaaaatattcattcaatcaaaagatatcaaacaaaaattattg ctagttgactctataaagtagtagaaaacgacaaaaaacagcCTTAATTG TCAATCAACCAATAACAAACTTTGTatgatattttttgattgaatgaata tttttgacaatttttttcacagtgatgatagTCAAAGATTTAAGAATCag tcctgtgaaaatggtaattataccacaattctacaaaaggttgattttta gcttcttgatttttcattttcatgtttccttaattttcaatttttttttt tttgataatattccagtCACAAATAccggtgcgccacaaaaaagtttctc tctttaaaactaactttctagaaatctaaacatttcaaaagaaccattcc tattttattggaaagaagaaggataaacctaaattttgatgggttattta ttaaaatttgattcattagatcaaaagttatcctcaattgaataaaatgc tactttcagaaagtgctcgaaaacgttaaaaatcgacctattaaattttt actttaaatttggcaatcgcaatagccttctttgattaaaagcatttttt agTAATCAAACACATAAATTTCGAAACTGAAAGGCCGAataggtttaaaa tcttcatcaaaatcactttaatttacttttaccgaaattctcCTCCGATT TTTGGTTTTAGATTGGATAAAGTCTACGTAAGGCTGGATAtatctcgaaa cccatatttgatgtatttttatgaattttaccagatttttttgccttttt cgacaaattttctgccttttattgaaattcaaccttcctttatacaacaa aaggtcatttagacagctaattatcatttttgatgactgaaacgaagata atgatgtatcatgtaattatgcttccgtttaatttgataggtcgattttt aacgtttttgaggactttctgaaaataacttttttattcaattgaggata acttttgatataatgaatcaaatttaataaatgacccatcaaaatctaag tttatctttcttctttccaatgaaatcagaacggttttttaaaaattttt agatttcgagaaaattagttttgaagagagaaacttttttgtggctcACC CGGTATCTTTTCAACTAACACAAAATTGCAACttcattcaaattctatca gaagttacagccatttttgtctcagctgcaatattttgagacagacttta ggcATTCCTCCCTATTTTGATTTAGTTGGGGGTGTAGCTAAAGATTAAAG GATTTCGAAGATTTTTTGTGAAGCCAGTTTCAGAAACTCCTTTGAAATTA AATTCTATATCACAAATTTTTACAAGTGTTCTAAGTTCTTCCACCTTGTG TAGGTTAAAAGAAGCGATCCTCAAACGCATTAGAGATAGAGACTGAGAAT TGTCAATGTTGAAATTTGTTGCCTTTGGAACAGAATCATCTAGGGGAGGG TCATTACTGTCCATGGGTTACAAGGATATTTATTAGGTGGGACTTTCAGt cctttcaaaaatcaaaatcgaagtGTACATTTTCAGACAATGACATAGct atattttcaattaataataaaatttgtgatcgactGACAAATGATACAAA AACGTTTAATTTtaggtttcaaaatttttaggttTGGACTTCGAATTATC AAAAATCCTGAAATTTATAAATTATGAATACCGACAGATTTTGTATCAGT CAGCTGGAAAATTTTAGTGTTGGAGAATGTGCACACGTCTTAAAGTTTGC CTTTACTGGTATTTCGACTTTTAGCTAAAATAAGATacaaaaggagaaaa attataNCTTTAGACAGCCACCTTTAGTTTCCGATTTTGTCCGaatctta aaaattttcttttaaaagatcaACTACTTTTCTGCCGCCCTAAATTTTAG CAATAGAATTATTTATCATTGGAAATTTACTTGTTTGttaatcttttttg aaaatcatatTTTACGTTTTTGGCCTGCTCTTACACTGCTAATGtctatt tttaatgaaaagctGATCTGATCCCAATGTGTAGATGTAACTCTAATTAT CCTTTTTTTTCAGCCTCAATATATCAATAGCAAAATGGCTGAACGAAAAA GTATGTTACAGAAAGGTGGATACAGAGAGCCGCTGTCTCCCATCTCTTTG AGTCAAGCAGCTTCACGAACACCAATGCGTAAGAAGACCTCCAACATGAC TGCTAAAACACCAACAGCAAAGACACCTTTAGCTAAAACACCTGGTAAAA AAGGAACATCAATTAGTAGTTCATCTTCTGATTATGATCGTTTCATCCCA AATCGTGCTTTGATGAACAATAAGGTATGTGTACAGGTTTTTTTTAATAG agaaccttaacttggctccgagcctggagttccttatttttcaaGAGAAT TTCAGCTTTAAAGTTCCTTATCGTGTTCTTTATTGACTTGGTTGCTAAAA TTGGAGTTGCTATGTATGTAACTAATGTATAAGTGGGTAAGTCGTTTTTA GCCTAGGTTTTCTGATAGTATATCTAAAAGTTGGAAACACAGCCAGGGAT ATTcaaaaataacagaaaaattTAATTCTCCAATTTTCAGCTTGGCCATC ATATGTTGatgaagttgaaaaaaaatgaagaaacggAAGATGGTGTGGAT AAAGAGGACTTTACAGAAGCGATGCGACAAAACTTGAACGGTGAAATCGA AAAAACTGGTGCACGAATTCTTCAAATGAAGATTAAAGCTCCTCAAACTA AAGAAGGTGATT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00052819TCONS_00052819Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00052819-proteinTCONS_00052819-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_220supercontigscaffold_220:508443..520154 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
18.66 17.03 50.14 50.19 18.32 15.53 15.39 18.61 8.81 10.83 8.52 6.94 7.06 6.95 10.87 13.47 12.19 12.27 2.94 3.12 7.02 5.87 14.55 13.6 13.59 10.27 5.79 2.96 10.65 11.68