XLOC_033396 (gene) - C. hemisphaerica

Overview
NameXLOC_033396
Unique NameXLOC_033396
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_220:494032..499511-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_033396 ID=XLOC_033396|Name=XLOC_033396|organism=Clytia hemisphaerica|type=gene|length=5480bp|location=Sequence derived from alignment at scaffold_220:494032..499511- (Clytia hemisphaerica)
GACAGTGTCGTTATTAGTTTTGTTAATCTGACAAATTGATATTTGTAAGT GCACTTTATATAGTTTTGAAAATTCTTATTCTGGTTTTCATGTTATTAGA TGCTGTTTTAAAGCTTTAGAGCTAGCCTGTCTTATTAAAAAGAATAAAAT CATTTTTAAGAAGTAAATTTTTAAAATGTTCCACTTAATAAAAAACCTGA AACCGTTAAAACGCATTATTAATCATTTCTAATGCATTGTGTTTCTCTGT TTAGTAATATTATTGAAAAAAAGGATTTGAATTTGTTGGCTTGATGCCAA ACTTAAGATCAAGAAAACGAACCCAAGAAGAACTAACACACCAGGAAAAA GGAACACTAGAGGACGGTAACACCACAAACGCAACAATGGCAAAAAAGAT GACGGTTGATGAAATTAATCAATGGGTTATGATAGGGCCAGGTATATAAA TCTGAGCTTAATAGATGAGGAGATTTAAAGAAATGAAATGTCAATTTGTA TAAAACCTTTTAAACATTTTTTACAATGATACCCTTAGCCTCACATTGTA CATAATCTGTTGAATTTTCTGGTTCTGACTTTAAGGTTTTTACTTATATC CTTCATTATAGAAAATTTGTTTATCAATGATGAAGATTTGTCTTTACATA AACTACCTCATCCTCAAAATGGTAAGCTCTGGTCTTGTCGTTTGCTGTTT GTCGTTCATAGGGTACATGTAAGATTATTGAAATTTATCCTTTTTAAAAA TGATAAACTCCATTAATAAGAATTATAATAAGTGAATAAAAAATATTTTA CTCTTGTGTTCTTTAATTGTAAATGATCAACAAAATGGGGGAATTTAAAA AAGAATGCAACCTCCACTCCCCCCCCCCATCAACGTTTTTCTTCTGGCAG AGCCCATTCTACGTTTAACTGAAATAATTTATCACCTCTTTAGGTGTTGC ATCTCTCTTTGCTTTCAAAAACAAACAAGTTTTTGAGTTGATGAAATATA AGGATACTTATCGTTCATGGTTTATAAACCAAACTGTTCAGAAAGGTAAT ATTTTACAATGATAAAATTTTTGTATGTCTGGTATAGAGTAGCACATCAA TATTTGAATTTGACAAAAATATCAGAGAGTCTTGCAGTCAAGACTAGAAT ACCTTACTAAAAGAAATTATCAGCTTCAGAAGAATATAATTTTGACTCTG TTAGTTAATGACTATTAAGTGGGTTAGTCTTTTAATCTCCAGTGTTTGAG CATGTTCATTTCCCCTTAAATTGAACTTTCTCCTTTTAATTGTTGTATAT TTTCTTTATAGATGGATCTTTTTGCATGTTGACCCCAATTGATCCTTTAT TTCTGGCTCTTCCTTTCATTGAGAAATCCTCAATCAAAGTAAGTTATATT GTGGATGGTTTTAGTTTTCCTGCAAATTATAATAGTAATGATGTCAATAA ATCCCAAATCTGGTTTTCTGGGATTATAAAGATCTATGGAGAAATTAATT TTTTAATTTTGAAGTTTTAAGCTTTGAAACTATGTGTTAAGCTCTTCCGT CTCAGACGGATTGCCGTCTCATTGAGGTACAAAAATAGTCTTTTCCGTCT TCAAATCCTACAAAATCCGGCAAAATTCCGCAAAATTTGTAGAATCTTGT TTAATTTGTTATTTTAGAGCCCATTTCCGTCTGAAACAAAAACTTTTCGC TTCCTTTGACTACTGTTTGGAATTTGTTTGGGAATCTCCTTGTTGACTTT TTAACAACAATTATTTAGGGTCAATTCACAACATTGGATAATATCATGGT AGATACTGATCACACACCAGGTCTCCGACAATTAGAATGTTGTTTGACTC ATAATATGTTGTTGAACGTTTGCGATACTAAAGGTGCGGACGACATAATC GTTTATAAATCAAATCAGGAAAAAATCACGAAATGGTTGTCTCAAAAGGT ATGTAAAGGTACAAAAGTACTACACGTTTTTTAACACCCAATTTCTTAGA AAATTACAAAAATTCTCACAGAATTGTTAAATTAAGAACATTTTTAAGCT TAAAACTCAAAATGTTAAGAACATTGTCCATCCGTCCATTAAAACTAACT AACGCTCGATTTTCATGATGGATACATTAGTTGATGATCTTGTCTACACT GATGCCCTAGGACTGACCTCATTGAAAGATATTTTCATGAGTGACATAAC AATCTGTATCTGGAATGTAGTAATTGCAAAAAACAGCTGGCTTGTCAAAA AAGTAATGTAAGTACTGTAAAATAAGAAAAAAATTAACTTCTTTTAGATA ACTACCATGGCAAAATATTTAGAATCTTCAAAAATCAATGTCAAGCAAGG TGCTCAGATCTCTGGATACAATCGAAGTTCTGAAGGACAGAATAATAAAG GTTTGTTCATTTTTGTTGTAGGTTATCCAGGTTTATCGCATAAAAATCTT GATCAAAAGTACACAGGAAACATGTGGGTGGCAATTCACCAGAGGGGGGT TTTCCAGGTGGCTATTTTTCGAATAGGAATTTTCGGGTGGGGATTTCCGG GTGTAATTCACTGGGTGAGAATTCACTAGGGGCTTTCACCAGGAAGGAAT TTTCCAGGATTCAGTTCTACGCCATTGTAGAATTTAAAATAATTTATTGT ATTCTTTTTCAGAAAGCAGTTTGCGTTATGCTTGGGAAATGGTTTCTGAT TATATCACAGAAGATAGATCTCTGCAGTTAAAAGAAAATTTCGGGTAAAA TGAACACTTAGCTGCTTATATTGATATTTAGCGAGCGACTCCAGAATTTA GCTAGTAGTTACATTGTTAGCTATAGCATGCATTTTAAACAAACATTTTC CTCCTAAAATGCATATCTTTCTTCTTTTTTCTTAAATGCACGCTTTTCTT CTGAAATTTACATTTACCTTCATAAAAATGAAATTCCTTCAAAATTTAAC ACAGCTAGAGATTCCCTTTTCTAAAGGGCAGGTGCGAGTTTTCTTAAATA CAATTTCTTTGTTGTGCACTCTTTCAGAATAAAAGATCCGGTAAAGACCG TGAAGACTGAGGAGAAATTGGATCCTCCACAAGCCAAGGTAAAAGATCTT CTTGTTTTGTACACTCGAATCGTAATAATCTTTTTACTACAGTAGGGTGT TGTATGATATTACGGTACGTTCAGAGCGAATTTCAGTTTGTATCAGTCTT GCAACTCTTCGCCTGTAGACGGAATCCGTCCAGTTTAGATGCAAATATAC CATTTTTTGTCTTGCCAGTAAGAGGGTTTTTGGTTCAAATGATTTAAGCT TTCTGTCATAGTCTCAAAGCCTAAACTACAATTTTATTTTTTGCTTATTT AGTTACCACTATGTCTTAGTTGTCTTGTTTTGAAATCTTCATTCAACGGG GGCGAACTACGTATTTTCAGATCATGAAATTCGTTTTCCGTCCTGCCATT GAGAAAGAATCATGTTAAATGGTCAGTAATCAGACTAAATCCAATAACTA AATTTCAGGGGCCTCTTTTTCAGAAAAATTAGATTTTGGCACTTTATAAA TAACATTTTTCTCCACTACCTATCACAGGATTTTTGTAATATAAAGAAGT ATATTTTAGAATTTAAAAATATTTAAAATGACATTTTCATCTATCATTTT TAGAAACAAAAGCTGAATAATGACCCGGATGCTAATTGTTTGGAAGATTA TCGAAATAAAGATGCACCGAAAAAGGTTTCTTTTTGTTCTCGCAAACCTT AGGGGACTAATTTTCACGGTCGAAAAAAAACTAATTTTCACGGTTTTGCC TTATTTTGGACACATTTCATTCATTTTCTAAGGCTTTTTTCAAATTTATT GATGAAAAATGGCCAAATTTGTAAATTTGCGGGCTCTTAAAAGCGAAGAC TGTTCCCCACGAAAATTAGTTCCCTTGAGGTAGCTCCGGATTTAAATTCA TATTTGCGACAAAGTGTTCGGCTGTGTTAACTGGAAATTAATGCAGGTAA TATCTGTTGATAGCTCACAAATTTTGCAGTGGTTTTCTGACTGTTGCTGA ATCTCCTATATAGGATTTGAAGTCAGTTACTTCATGCAAAGGTTGCGCAA ACACCGAATCGAAATTAAATTTACCGCAATGTCTCGAAAGATGAACGTAA TTTTTGTAATGTTCTTGAAAAAATAGAAGATTTTCTTCTTTATCTACGGG ATACAAACATACTGAAGAGTGAATTATATTATATTATATTTTCAGAAAAA CACTGGCACGACAAAGTTATCAAGAGCTCAAAAACAATTGGATAAAGTTG ATAAAAAGGGCATGAAAACAATGAGCAGTTTCTTTGCCGTTAAACCGAAG AAAAAGTGAATGGTGGCAAGAAAAAGATAGCATATAGCTCGAAAAATCCC CATCAACAAAACATGACTCAAGAAGGTGGAGGGCCCATGGAAGAGGATGT TAAGCCCAAGAAGACGAACGAAAGTGTGTCCATACAAAATGGAACGGAAA AAAGAACAATACACGTTTTTTTTCATAAGAACATCCAAAATTTTTGAAAC CTTCGGATGTTTTTTACATTTTGAGTTTTAAGCTTGAAAATGTTCTTAAT TTCACCAGTTTGAGTATTTTTGTGCAACTGCTCTGAAGAAGTTGAATATT TAAAGTCCATGAAACCTTAAAATGTTCCTAATGTTCCATTCATATTTTTC CCATTGAAGCCTTATGTTCTTATTTAGTTTGTTCTTATAAAAAACGTGTA TTATGTCATAAGGGCTTTACCAATGGAGGAAAGGAATTGAATGCGTGGTG GCGACAACGCTGAGTGCTGATTGGACAAATTCAAGAGAAGAACACATTAT TTAAATCGGTTATCATTGGCGCGTAGATATAACCTGATTCAACCGGCTTT GTCGGGTGTTATTGAGATTTAATAAAGTTAAATTATCTGAACTGATACAG TATACTTACTTGAGAATTATGCGCAGAAGAACGATAATTTTTGAACCTAC CTCGGAGGTCCTTTAATTTAACCTTTGTTCCTTCGTTCGTCTGTTACCAG CTTTTCTCGGGATTGGCCCATTAGTTTTTTTCTCATTTTTTGCATAGTGA TACAAGATGACAGTACCCAAAAAGTGAAGGAGCCCGATTTTCGAAAAAAA TATTTTTGGAAAAATTAATTTTTTGGAAAAATTTGGGCCAAAGACTGCCT AAATAAAGGGTTTTTTGGACCTTGTGTGAAATTGCTTCATTAGTTTTTTG TTTTTTTTGCATAAAGATAAAGGGCAAGGTTCTCTAAGGTGGCTGTTTCT GATTTTTTGCACAATGATGTAAAATGATAATGTTTAAAATCTGATGGAGT AACAGGGTTATCAGTTCCGAATTTCATGCTAACAGACTCCGGTGATTGTA ATTTTTGAACAGTACTGTGTTTACGATGTAGATTTTGATGATTTTTGTAC GCAACATTTTCAATAAATGATAAACTCGGT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00052865TCONS_00052865Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00052865-proteinTCONS_00052865-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_220supercontigscaffold_220:494032..499511 -
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
RNASEH2BPREDICTED: ribonuclease H2 subunit B isoform X2 Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
33.77 32.79 15.19 11.7 22.72 18.35 26.1 27.39 18.92 15.69 15.32 15.37 10.41 11.4 8.05 9.03 14.72 14.63 5.98 6.81 14.69 13.12 22.11 21.79 16.77 21.45 8.41 5.74 11.87 13.83