XLOC_033663 (gene) - C. hemisphaerica

Overview
NameXLOC_033663
Unique NameXLOC_033663
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_228:701500..705752-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_033663 ID=XLOC_033663|Name=XLOC_033663|organism=Clytia hemisphaerica|type=gene|length=4253bp|location=Sequence derived from alignment at scaffold_228:701500..705752- (Clytia hemisphaerica)
AAACTTTTGACTTTAACTGAGTAAAAAGTTGTCTGCAATCTTTCTTTGAT
CTGTGTCACTATATTTACTGTTAGTGGTTTGAGAAAGATATGGAGAAACT
ACCTTGGTTATTAGTTCTCTGTTTTGGCTGTCTTTCTGTCTTTAATTTTC
TAAGATATCTGGAAGTGGACTCTCGATTTAACAGATTGGAGTTAGAAAAT
TGGAGTAAGGGTATGTCAGTTCACATCGTTTTTCTCTGCGTTTGATAGAT
CTTTAGATAGACTTGTTAAATGTTTAAAAATATTTTTAATTGACTAAATT
TAGAACTTCTGTTTCACAAACCCGCTGGGACCCCCAGGGGGGGGGGGGGC
TTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNCCCACTAAGGGTCGGAGAAATAGGAA
AATTTCAACTTTTTACCCCCGGAAAGATCGAATTTGGTTAAAAATAGGTC
AAATTAGTCCCAATAAGAGTCGTAAAATTCACAAAATTTTCCTTTCTTTT
CTTCTTTTTAGTCCCGGTAAGGGTCCAAAGGTTGAAAGTCGGGCAGCACC
CCCCGTCAGTTCGCAATCCTAGTACCCCCAGGCTGGGACCCCATCCAGCA
TGACTTTGTTTGTATCCCCATCAAACCCATCATCTCAAAAATTTGCACTC
CAAAAACAATAAAGTATAAGCCCAAAGGGCTAGAAGCGAATCGGATTTGA
AGCCACTGAATCCTACCTAAGTTACACGGCCTTCCGGATTGAAAATAAAA
TTTTACACTAGATTAAAAAAAAAACACTCGAAAACAAAGAAACTGCTAAA
TTCAATCCGTCGTCAAAAAATACGGCGTACATTCTGAGGCTTCACTTTTT
CTTGCCTGAGAAAGGTTGAAGATTCGCATCTAGCCCTTTGAGATTATACT
TCATTACTCCAAAATTATCCCGCTGGATTTTTCGACCTGAGAATAATAGA
ACTTCTATACCCTTTAGAATTATGATAAAAGATTTTCATTCCCACTAGTG
GGAAAATTTCAACCGGGGCTACGAGACAAGGGTGTAAAACAGTAGGTCTC
CTTTACAGAGCACGAAACGGGAACGCAAATTTCATTTATGCATTAATGAA
ATAGATGATGAATTTGTGGTCCACTCGTGGTCCACTTAGCTTTTTTGGTC
GAATACTCTAAAAAGCATTGAATAGTCTTTTTTAATTTTTAAATCTCTCC
TTTTGTAGATGTGGTAAAAGACAGATCTCGACGTGATGCTCCAAAGATGC
TGGATGAAAATGTACAAAACATTTTATCAAGTATTGAAACCTTAACTGAT
TTCGTTCAAAAGCAATCGAATGAAACATTCAATGGAGAAATCAATCAAGC
TTTGGAAAAATTCTTCATGCAATTCCCTACGAAAAACATTTGTAAACAAT
TCGTAACCCAGTGTGGCTGTAAAGGTATTATTGAGTTGTTAGTAATTTAA
ATTCTGAGGATAGAAATATTATATTTAATTCAACTAACCGGTTTGAAATA
TTTTCAGTGAAAAATCTAAATCTCTGAGTTCGTCTGTGCATATCCAGGGA
TATGTTATAATAGCGGAGCGTATTTCCCTATTAGGCATCTCACTTTACAT
ACATAACAAGCATTGGTTTTGTTTACGCCCAAACAAGAAAGCAATTGTGA
TATCATAAATTTCAATATTTTATTTTAGAAAAATGCACCACTATTGACAA
GGATTCCAGCGATGTAAAATCAACAGCTAAATTCATTCGTGGACCACCGG
TAGGTAAAATATATTTTCCAATTTCTGTCAGTAAACAATTCTCATGCACT
CTTGGAAAAGGAGCTTTTGACTCAGACTTAGAGTAATGACTTATTTATTT
CGGTTTCAGGGTCCTCCAGGACCAAGAGGATTAAGCCTAGAACCACCACG
ATTGATCAAAAGCTCACTTGATGACCGAATTGTTAATCTAACTGATTCAA
CAACATTCGAATGTTCTTTTTCTGGAAACCCATTGCCTGAAATTTCTTGG
AAAAGTTCAGCTAAAAACGCTAAAACCATCACTTGGAAGAATAAAGAAAA
CCTTGAAGTTTCAAGTCGAATGATCATCTCAAATATTTCATGGAGCGATC
AAGGACCGATCGAATGCCGTGCGAAGAGCTTGCTCGGAGAAGTTAGTGTT
TCAGGAAATCTTCACACATTGTGTAAGAATTTATCGAAGTCATTTTTATT
CTAAAAATTTTTGTTCCCTCTTTCCAACTGGTAAAATAATCTCCTGACCT
GACTCTCAACTAACATAGGGTTCGCTTTTTGCATGTTCTTAACAGTCGTG
TCATTATTCTTCTTTGTAGCTCACCCAGTCATAAATACCACAAAAGCATT
GGTTTTTGCACCACAAGGAGTTGATTTCCACTTCCCTTTGTGTCAAGTAC
GATCCAATCCACCTGCCAAAATTACATGGAAAAGAATATTCTGGTCATTA
CCAGCCGGTCGCTTTCATATCCGAGAAAAAGAGTTGCTTATAAAAGATGT
ACGATATTCAGATGAAGGGTTCTATGTCTGTGAAGCTGAAAACATGCTTG
GTAAGAACGTTGCTTTATTCCTCAAAACTATATAAAATGTAGAACTTCAG
TACACCTCTGTGTCAAACACCCGTTGGGACCCCCGCGAATAAAAAATTCG
GCTGAAATTTTGCCCCAGTTGGAAATTTACCCCACAATTTCAGTCCCGTT
GGAAAATTAACTTTGTTTTTATTCCCATTTGAAATTCAATAGGAAAAACC
CACTATGGGGGAAGTTCCATTGCTGGGGCTGCAAGACAGAGTTGTTTTAA
TGTCACTGGGTCTTTAAATATGTAGATGTGCTTTATGGCTCTAAGTGACT
CCAACTCTTGCCGCAACAACAAGTCATTGTTTTAAAATGTCGCAGGGTGT
ATTGAATGTTTGATCTCTGACTTCTGTTTGTCTGTTTCCTTTCAAAGGTA
AAGCTCAAATGACAGTCCAATTGAAAATACGTTCGTTGGAATTGCAATCG
TCCTCACCTTCATTCATCCAAACTACAAAAAATGTTACATCCATCGAATG
TTCAGCATACGGAAACACCCGAATAATGACCGGGACTATCACGAGATCCG
GAATGCCAATCCCTTCCGTGAGCGAATCTATAAAGGCCAATTTATTAAAT
GTGAAAGCTGTAGTATCTGAGAATGGAACATATCTTTGTACTGTCCGAAG
TGGAAGTGAAAAGGTTAACAGTGCAACTGTGGTTAAGATTTTACGTAACT
TCTTATTTGGTTTTATTTCATTTCTATATGTTCCCATTACACTCGTTTAT
GCAAAGAAATTTCATTTTTAATTTCATGCCTTACGGGTCACTCTTTTGAA
ATGATGCATTATGTTTTATTTACGTCATCTGGAAAAGATTCTACCTTAAA
ATGTGTACGAACCCTTAGAGGGGGTTTCAGGGGGTATCCGATTCCACAAT
TCCGCACTTCTGCAAAATTTTTTGCTAAATTCTGTTTTTCTGCACTAAAA
TTGTCTAATTTTCCGTCTCCGTCGGAGAACCCAATTTCCGTAATTCCGTC
TAAATTTTCGCCAAATTCCGCCACTCCGTCCGAACAAAGGGCTGATTCCG
CTCCTCCGCCAACCATGAAACCCCCCTACATAGGAGAAGCCTTATCTAGA
AGAGGGGATTATTGAAAATATAAAGCCAGGGCATTGGAGGAGGGAAGGTG
GCCCCAAGCCTTGCGTAGAATCTATAAAAATATCAGCTATCTTACAACTA
TTTCAGCTCCCGAGAAAACAGAAAAGACAAATCTGAACCCAGAAACCTCC
TTACCCTCGATCATAGCTCTAGCTGGTGACGTTGTCAATATCAGTTGTTT
TGCATACGGGAATACTCAATATATGAACGGGACGATCACAAATGCGGATG
TACCGGTACAGAATGTTACCATCATAACGAAAGATGATTTATTTTTGGTG
AAGGCACTGGTGGTTGATGACGGAACTTTTGTTTGTACCATCCGGAATGA
GACAGATGATAAAGTTATTGTTGAGAATATTTCACGCGTCATATTCTTGC
CTT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00053348TCONS_00053348Clytia hemisphaericatranscript
TCONS_00053347TCONS_00053347Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00053348-proteinTCONS_00053348-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_228supercontigscaffold_228:701500..705752 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0.02	0	0.03	0.48	0.38	1.5	1.62	1.97	3.17	1.79	2.83	22.25	17.94	59.14	56.19	18.51	20.85	7.27	4.57	8.11	7.08	8.73	9.93	18.08	13.02	2.75	6.01	31.07	24.96