XLOC_033735 (gene) - C. hemisphaerica

Overview
NameXLOC_033735
Unique NameXLOC_033735
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_231:231044..234774+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_033735 ID=XLOC_033735|Name=XLOC_033735|organism=Clytia hemisphaerica|type=gene|length=3731bp|location=Sequence derived from alignment at scaffold_231:231044..234774+ (Clytia hemisphaerica)
CTCGTTCAGCTTTTCATAGCTTTTCTTCCTTACTTTGGGCTACTACATTC
TCAATCTCCATTCCCTCTATCTTTATAACTTGGTCGACcatagacaggag
acccgtccaaAATATGATCTGATGTAGTTCGGGTTTGACCTATCAGTTAG
CTTTTGACATAAAAGATTGACAGAATTGCAGCTctcaattaacaaaaaca
actgTGTTTTTCCTTAAGTGTCACcagtaaaagaaaaacaaaatttgatt
gccTTTGCTTTCTCAGCTGTCACTTTAAAGATGATGATAAAGCTCACAAC
ATTAGTTTTATTCGCCGTATGGACTTCCTAGTATCTTTGCGACGTCACCA
ACTTGTGACGCAACAAATTTCgagaaattgacgtcaaataaaatttgcaa
aagaaatggAAAGCTCATTTGATTTTGTGAAAAGATGTCTTCGGTTTCAG
CAGAGATCGATTATTTTGAGAATCAAGAAACGAAAATGTCATTAGATAGT
AATAGTGAAATAATGTCTGATGAAATTCAGTTTAAAGGGAACCTCACTGT
TGAGCAACGCCTTAAAATTTGTGAAGAAACATTTGTCGAAAAACAAATAG
AATTCGAACACCAATATCGTTTGCTGGCAAAAGATTACGAGCACAGCATC
AATTACGCGCAAGAAGTGCAGCAAGAGTTGATCAAGACTCGAAACCAACG
CTGCGAGGAGTTCGAAAAACTCAAAGAAACAAGCCAAAACGAGAGAGCAG
CTACAAGACGcttgtttaaaataaaaaaccagAAAATTTCGGAATTACAC
GATCAAGTCCGTAATTTACACGAAGAAGTGGCAGCTTGGATGACGTTGGC
GAAATATTGTCAATGTGAAGCAAGCGTCAACTTCGCAGGAGATTCGCAAT
CTCCTTTGCTACAAAAAACCAATTCTCTAAAAGAAGCACGTGctgcaaaa
agtttaaagagaATCAATAGCCAACGATTGGCTGAAACGCAGTCACGTGA
TGCTGCACGCAATAAACGATTGGTCGAGCCAAGATCATCAAACAAACGGC
TCATCCCAAAAGAAGCATTGGAACCGATTCAATCAAAAGAATTACCTTTC
CGATCCGCCAATCCTAAATTGTGAGAATCTAAAATCTTACTTTTTTCTGT
TTCAGTATCGTGAGTGTAGAGATGGAAATGTCATTTGATTTTAGAAAGTT
TGATTTAAGTTTAGGTGTTTAGATATGAAATCTTGAATTTAGAATTTGta
aatgaaatattttggttttacttTTCAGTCGCGTCAAAGTTTACAAAGAA
TTGTCAGTTGATGAAACAGTACTGACCAAGCAATTCCCCATTTTGTAAGT
TGATAGAAACTTTGTTGTTTAGTTGTGAATCAGAGAAATTAGTTTTTACT
GTAAAGGACAAACATGAGAGTAGTCAAAAAGCAGAGATTGACATTTTAGT
TACTAGCCTTTGAAAAGTTAGTAGAGATAAAAAGAATAAGTTATATTATG
GAATTTTTCTACCTCGTTCTAGACCGAAAATCGAAAGAGGAAACAGTTCT
TCCGAAGATTTTGAAGCAGATTCGTTGGACGTGAGAGATGATATgtaaga
aattttcatttaaacGCCACAATCTAGTACTGATTAGTCACCGAGGACGA
ATCAACGAAGTGGTTAAGATCAGTTCGATGATGCATTCTGGGTTCATTAC
CGCTCCGGTAGCTTCGGTGTTTTCTTTCTAGCCTTTTCCAACGTGGTTCA
TCTAGGTTGGTTTGCATTaagtgtttgaaaaaatttcgttAATTTTCCAC
TGTTAAAGGGATGCAGTTTGATATAGGTAAGGTAAGTAGACTATGCAGTC
TCATCAGATCTGGTTACATGGGAACATCTGGTCTGTCATGAATTTGGTCT
GGTACTGAACTtatattattgttttgttttaactCTCAGAGAGCTGACAT
ACAGAAAGACACCATATTTGGTTGGAAGTCAACAACGAAGTGGTCAGTCT
CACGACTGTGATGAAAGTATTGAAGATGATTCGTTGTTGAGACCATCTCC
GTcggtttcactttcgttttcaacaaCTAGCACTCCTCCACCAGATTTCA
ACAATTTGAAAGTCTTGTAAGTTTTTTATTGACGCGACTAGTTGCCAAAT
TTTTCTGGCCTTGATTCAAATATATGCATTCGTTTGATAGATTATTTTGC
AGATTAAGTAAAAGTAGGGGTAAATGGTGTTCAAAACAAGTTGCTGTTTT
AGAGGAGAGAAAGACCGTGTGTCAATTTGTTTTGCTCGCCAAGGGTTGta
aaaatcatgtgtttgattgtCGAACCCTCACTTAGCCTCACTTAATCAAA
ATTGTCCATTGTTTCCCAGACCTCCAATCAAAGGAAATGAGAACCAGCAT
TCAACTCCTTCACCACGACCACCATCAGTGAAAAGGTAAGACCCTCGATA
AAATGTATGCATTTTTGTGTGGAAAAATGGGATAATGTTGTGTACTTTCT
CAAAATGATGGTGATTAAACAATAATGAGATCAACCATTTTTAGGTCATA
CACTGTCTTGTCACCTATCACCAACAAGTTGgcgtcaaaatcaaaaacac
cATCATACCACAAGTAAGTTCCCTTTTAGTGAATCTAATCCGTATATGTT
TCATACCATGACTCAAACATACGATGTAGAGAGTAGGTATTCTTTATAAT
GTTTCccagataaaaaaaaacactagtAAAAATATAGTCAATAAATATAT
ATGGAACAGGTTGTTTGTGCAGAGTAATTGTTTTAACGAGATTTACTCAA
TCTAAGAATGATTGATTTTTCAGACCCCTTACTATCAGACAACCATCAAA
ATCACCATCATCACCAATCATTGCACGATTACCAGCACCGCCTACTTCTC
CACGAAAAGATTTCACACCTTTGAGATTGCCAGTCATCTCACCGCAATCA
ACAGCTCAACTGAAACAGTTAGTAAATATGACGCATCCTTTAGCCTTGGC
ACTTATGATTTACACCTTCGTAGTTAGGAAATACAAACTTTATTTGTATA
ATTGAGATACGGAGTCTCGATATGTCATTTTTCTAACGGTAGCTCCGAAA
AAAATCTgttgctaaaatagaaaaacggTGGTTCGTCGCCAGCTTGTGCT
CCCGTTAGAAAATATGACATCTTAcgcatacacgcttttttaggttagga
tcctaattcatactagatttaacagttagtacatacgtctcaagcataaa
atggcatttttgtgaaaggatgCCTTACTTGAGGGTAATTGAcagtttat
aattgaaaatgctctaaaaatggcattcttagcttgagtagcaaaattcc
atgatggtgatattcttagcattattcttaattttttggccattttcatc
atggacattcttataaagtgtattcttataaaaaaaagcgtgtatcaagA
ATGGACTTCACTAATTTATCATTCTTGATTATAGAGAAGAGAGTGACGTA
CATGGTAGACCAATCGCGTTCACATGTCCTCTCCTTTCACCGTCCAATGA
ATTCAAACCAAAACCGCCGACTACAAAACCACAACGGCCCCATTTGAACC
ATCGACACCAGCGCCGTGTTGGAGCCAAGCCCGGAATGCCCAATAAAAGC
GTAAGCTTTATCATCAAACATTAAAGACGCTTCAAAAAACCAAAATCTCA
TattcataaaaatgttttccaaataTATCAC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00053438TCONS_00053438Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00053438-proteinTCONS_00053438-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_231supercontigscaffold_231:231044..234774 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.04	0.1	0	0.02	0.08	0.26	0.34	0.27	0.07	0.04	0.41	0.11	0.36	0.27	0.02	0.15	0.08	0.03	0.11	0.09	0.08	0.06	0.02	0.04	0.33	0.29	0	0	0.04	0