XLOC_033980 (gene) - C. hemisphaerica

Overview
NameXLOC_033980
Unique NameXLOC_033980
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_234:417652..426466-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_033980 ID=XLOC_033980|Name=XLOC_033980|organism=Clytia hemisphaerica|type=gene|length=8815bp|location=Sequence derived from alignment at scaffold_234:417652..426466- (Clytia hemisphaerica)
TTCAGATGTTAAATCAAATAGATTAAAATAAATGTAAATACATCTTGTGA ATTGCTATTACTTGGAAAATGGTTAAAATGAATTTGACTACCATCTTTAT TTGTTTATTCTGGTTGCTAATGGTAACCTGGGCACAAGTGGACGAAGAAG AAGTACGGGCATCCCATCAAAAGTATGCGGAAATGATGAAACACGATGGT AAAAAGAGGGTAAAAGTCATCACTCAAAAGAACGTCAAATCCTTGATGAA AAAGAATGAGATTTTGGTTGTTTTCTTTTGGGTGGACAATGATAAGAAAT TGGAAAAGTTGAATGAGCAGGATATGTACTTTCTGGAGGTAAAATGATTA TTTCTCAATTTATTTTCCTGGTAAATTTGGGTATATATACGTCAAGGTCT GCTTAATCAAACAGCATTTCTCTCTAAATAAGTTTGAATTCATTGACCCA GTGATATCCATATTTGAAGCCTATCGTAGCTTGGATCATGAGATTTACGT TTGGCTTGCTGCTTTTCATGATATTTTTCTCAAATTATTTCTGTTTAATA ATATTGAAGGGCTATGCAGTCGTTGTATAGAAAATTCATCAGAGCAACGA CTGTGTTACAACCCTTCTTAAAAATCTACAATACCAACTAAGCAGTCTAT CTGTTCCTTGATTCGTTACCGGGCTGCAGAGACAGGTTAATGTTAGATAT AGCCGGTTATTATTTCAAGTCGATATCCCAGTTATCTAGGACTTGCCTGG AACTTCCGCCATTATGGAAGCAAACGTTCGATTTGCGTAAGGGATTGCCC TCTACAGATTCGAACGTTTGCTTCCAAAATGTCGAGGATATTACGTAATT TAACCAAACATATAAAAAACCTCTACACAGTCTTACGATTGTTTTCACGT GAGGTCCACGGCCAGCTGTTTCGGCTCGGGTGTAAACTCAATGTAACATT GAAGAAGGAGTTGAGATTTGAACCGGGGACCACCCCTTGACTGTGACGCT GACGCTTTAGACCATCACATGATTCTTCCCTGAATATTATAGTTTACTTT ACTCGTATTTTTATTGACAGACGGTAGCACAATCGTTTGAACTACGCAAA GTTGTCATAAGCACTTGTGAAATCATGGCTAACCAAGAATTTGCTTCAAT AGCAGGTATGAAAAAGAATGAGATGTTTTTTGTAAAGTTTTTGATTTTTC TAGCTCGGATAAAATTCGGATACATTCTTTTAAGGTGTTTTTTTTCAATT CTGTGAGAGTTCTATCCGAAGCTTGGTTTTGAAGCTCTCTAATTTGCTGA AAGCGATTTCGGCATGTATAGCCGTTCCAGTAACTGTACCAAGGGAATTA GACGCGGGAAATATTTTCGGCATGATATAGCATTATTTCGATTTATTTTT CAATTTTGTTATTTAGAGCTTCGATTCAGTGGGATGATAAAGATTTTCCA TAAAGGCAAAGTTCAAACATACGGTGGACAAAGGTAAGGCGTATAATTTT TGCCAAGACGGTAAATAATAAGCCGATTCCGCATGACGTCATTTTCACCC GCGATCAGCCATTTTTTAAGAAAATGGTACAAACAACATGTCCAGGATGA TTTAGTAATACCTTGATAGCTCAAAGAGTTCAAATGTTTCCCGTTTGGAC CTGTGTGTAGATTTTTGCTTGTTTTTGTTTCGTTAGTGAAATTTATGTCA GTTAAGAACAGGTAGCTTGCTTGAGGGTTTGCTTGAAGATAGTCCCTTAA TGGATTTTGCCGAATTAGTCTATAGTTGACTCTCGCTTATTCGAATTCGA ACGGGGAATCTTATTTGTTCGAATTACAGAGATTTGAATTATTATAGAAA GTATTTTGAGAGGGATTCTCCTTGGCGGGGACTTGGAAAAAGTAAATAGA TAAATAGATTCGTATAAAAGAAGTTCCAATAAGCGAGAGTCTCAAGGAGT AGAAAAAGGAATTAAAACCATGTTTTTTATGACAAAATACTTGAAAACTT GAATATACAAATAAAATCTATCGAATTCATAATTCTTCACAGGAAATTTT AAAATGATTTGTTCTACATTCAGTTTAATCTCCTTCAATCACTGCTGATA TTCTGAAAAAAAAATTATATCTTTCTTACCTAGGTCACCAGACGTTCTTA TTCCGTTCATCTTTAAGGTTGGTAGTCTGCAAAAAAAACTTATCAAAGTA CAGAAGTTTACATAACTTTCTAGCTTGTCCTACTCCTACCACGGGTGATT CTCCTCAAAGGTTTTCTTGAAATTTATGCTCGCGCGGCGCGGGAAGTAGC AAAATTCGTTATCTTTTCCAAGCTTCCCAAAGTGTACTGTAAAGGTCGAA AAGAGCAGAGATGAGAAAAATTGCACTCTAAGACTGTAAAATTAATAAAA TCTGACCATATTTTGCCTTTAAATGCTCAAACATTTTCAAAATACACACC TTATGGGTCATTTTTTTGCCAAAGTTTACTCAAATTCGGCTAAATTTTGG GCTGCACGTACGGTCGTTTTTGAATCGAGTAAACAAAGGGTAAGAGGTAC TTTAAATGATACTCTTTAAAACGACGATAATTTTGTATTTACCATAGATG TTGACACCATCGGTCATTCAAATTAAGAAGAAAGCAGAAAAGAAGAATTT TGACGATATTGATCTGGTCAAAGTCATTGCTTACGTCGATAAAAACAGCA AAGGTAAACCATAGTCCGCATGGAAATTTTTGGTTTTGATGTTGGACCAT TTATAGTAGTTTGAGCTTTCTGTGCGAATTTTTTTGGAACATATGTTCGT AGGATTGCAACAAAATCCGAGGAAACATTTAATTTCGAGGAATTTACTTT CTCATCCTACCGATAAATTATTATTCTTGTGCAATATAGGAGGACCGAAG GGCGAACTTTTAGAAAAAGTCACTCTTAGGAGAATCTCTTTACGTCCATT CTATGAACTTTCGTTTTAAAAGTGTTAAAATACCATTTTTCTGAGTTAGA CCAGAGCAAAGCTGAATAACAATACTGGAATAACTAGAAGTATGTATCGG TTCTTTTTTCTTCTTCCACCATCAGAATACAAAGGATTCGAAGAAGCTTC TTACAAGTACCATCCGTTGATACCATTCTACTATGTCACCGATGCCAAAG TAAGCTCTACTCAAATATTTGGAATATTAGTGATATCTTCGGTGACAATA CTGTTGCTGTTGGATTAGCTTAAAATGGCTTGGTGACTTTTGATTACAAC GGTGACCTTTAGTGAGTTTTCGAACATCTAGTTGCAGCCTGAAATATAGT GGCAGTGCCCCTGTCAATTTCTGTGAGGGGTGTTGAAAGACAAAGGGCTG TGTAAGGGGTGTGTAATCTCTCTAGGTTACTTTTCTTCTCCTTAGCTTCT TTGTTCTAAACTGTGTATGAAATGGCTGCCGCATAGTATGATCATACCCA GCTGGCACACAACGTTGTTTTAACGTCCAAATAACGTTATTTGGACGTTA TGAACGTCACATGGACGTTGTTTTGACGTTGTGTGCCATCTGGGTATGCC TTGATTATTCTAATACACTGTTTGTCTCTTTTTATTTTTACTTTACAGAT TGCAAAAGTGTTTCACTTGAAAAAGAAGAACTCCTTTCAGATCATAAAAC CATTTGAAAAATCCATCAGTTTTCCTGCAAAGGTATTACAGTAGACTATC TTTATATCAATCTCGTAAGGGAAGCAACTTTTTATTCGAGATAGTCCTTG GTTAATATGGATAGTGCGGTGTCCTGTACTAAGTAGACCATAGATTTATT AAAGCCCAAAGAACTATGTCGTACTTTTGCTGAAAAGTGTGCCTTAGTTA GGTAGGAAATCCTACCAAGGTCACGTATCATTACAATAGAATTTCAGTAC TTGACCAATCAGAAGCTTTGCAAGCTTTCGAAAACAATATAGACGAGCGG CCGAGCTAGTGAATTTTCACTTCGTAGGGCACCCCTTAGATCAGGGCAAA TTTTTGATATTATGCTCCTAATAGGGTGTAGAATTGACGAAAAAAATTTG CCCTTCGAATCTCCTGCAGTTTTCGAGTGAATCGATTTTTAGTTAATCGA TAGAACTTATCAAGGGTCCCCCCTTTACTAACGGTTTTTTCGAAGTCTGA AAATCAAATATCTGATGCTACCAACTGATTCAGCTTGAAAAGTAGATAAA AAATGGGGTTATTTTTTAAGTTTCGTTCACCTGGTGCCGAGAAACGGCAT TTTAAGGCGAAAAATCGACGTTTTGGGCGTTTTCCGATGACGTCAGCATT TTCCTAGAAGCATTTTCAGAAAAAATCTTTCCCACGACTGGATAGCCCTG AATTAGTAGTATCCAAAAATGGTATGCTTTGTTAACTTTCTATGTCTAAA TCTCGAGATAATTCATTTTTAAAAAGGTGGGTAAATAAATATGCTGAAAA ACTGCTGACTCAGCAAAAAATATCGATAATTTTCAATATTTAAACCAAAA TATCTCGATTAACTAAAAATGGATTCACTCGAAAACTGCAGGAGATTCGA AGGGCAAATTTTTTTTGTCAATTCTACACCCTATTAGGAGCATAATATCA AAAATTTGCCCTGATCTAAGGGGTGCCCTACGAAAACCATTTTTAAGGCC TTTTCTGAACCTCGGACGCTGGCCTAATAGCAGTAATTTTCTTTGCGATA TTCATTTTTTTTTTTGCTTGGAAGAGCTTAAAGCACGACATCTAGCCATT CAGGTTTTACAAATCTGTGGAGTAGACTTGCTATTAGGTCTTCGTTTTAT CCGACCACCACGCCACCAAGTGGCAAATATTTAATCGGTTTCCCTTTTTA AAAGTTCCTGATTTTATCATCCATTGTATTGTTATTGATTTCTAGGGTAA ATTGACTTATGAGTCCATCGTCAAATTCATGAACACCAATAAACAGTAAG CTATCTCACAGAAATATTAAATTCACAGAAATAAACCGAATTGATAATAC TTACTTTAGGCGTACAAACTTTCGCGAGCAGAAACTTTCGTGAGGTCGAA GAATTGCGAAATTTACGACATTTACTTTCGCGAATTTGGGGAAAAAATTT TTTTACGCAAGCATAAACTTTTGCGAAATCATTAGATGAAAAAGAAAATT ATAATGAAAATTGCCTTAAAAGTGAAAGATATTCCTTGAATCTGATAAAG AGGGTTGCTCTTCGACTTTAAAGAGGCATTAAAGGATAAAAATTGGCCAA AAGTTTTATATTTATAACGATTTCGAGGTTTTATAGATTTCCCTTTTTTT TGAGAATTTTTCGCGAGCATAAACTTTGGCGAATTGCTCTGTTAATAATT TTCAAAGACACTTACCTTCGCGAAAAAGGCTAAAATTTGCGAAAATCGCG AAAGTTTCTGCTAGCAAAAGTTTGTACGCCCAAAGTAAATATTTTCTTTT TCATTGACCCTTGGGGAGATGGAAAATTGGCGTTTAGAGAAATATTTCCT TAAGTTTTGATGAAATTTTCAGGACCTTTTTAGAATTTGAGTCGGTTTTT CATTTGAACGAGATTTAGTTTATGGTGTGAAAAAGGTACCTTCCGCTCGC ACATACTTTATTGTTATTTTCTTATTTATAGAAGTATATTTCTCAGGTCT ATTAACCTATATAAAATAATCATTTGTTATTACAATTTATAAAATTATAT TTCCATTCCATCCCCTTCCCGAACTCAAATTATACCATGAAAAATCGGGT TTTTAGGTTCTTAAGCTATTACAGGTTCGCTTTGAATTTATACCGTATTT ATTCTTCCAGGGAAAGGTTGGTTAAATTGCGTTTGGAAAACATACATGAA ATTTGGGTAGGTATCTTTTTCTTCATTAGGTATTGGAATAGTTAGGTTAA GTGTCGAGTTTATATAAGTTGCGAGCTTGCTTTCCGGTTAGCCTGTAGAA TAGATCCGGAGCTTGAACGAAGGCTAGAGAAAATTCGTCCGTCGTCGTGA TTTATCTATCGATACTTAACCTCACTAATGCTTAAAGGTTATGTAACAAA CCCATCATTAATTCCGGCCAAGCCATTTTATTTGATGACCCAACAAGGGA ATCTCATCAGCAACAAATATAAGTACCTTAAAATTTGCTAACCTAAACTC GAGAATAGACTGCAGTTAGTTTCGACTTTAAACCACCCCAGAAAATCAAA GTTATAACATCCCACGTGAGGGCTAAGAATGTTAAATCTAAGTGATTGAT TGAATTTGTACCTGTGAAAGAATACCGTAGATATTTTCCTAAAGTCGCCA CTCAATGTAATTAAACACGATTATCTTTCTCAATAGGCAATTGATCTCAA AGGCTATTTGGTAACCATATTCGCCAATGTCAAAACTCAAGGTATGTCTC TTCTCTCATTCTAAATAGATGGTCATCCGATATACTTGGTTTGAATTTAT TTTATGACTTGTTCGTGGCTTAAATAATTACGTGCTATCAAAATTTCGAA GGAAGAGAGGGAAATTTTCAGTCGTTACCTTTATCATTACATTTCTTTTA AATCATTTAGGTGGCTCCAATTTCTTTGGCAAATGTAAGAAGCTCAGTAA ACAATTCGAAAAGAATAGCAATTTGACTTTTGTTTGGATTGAAGCTGAGC CGTTCCCACAGGTTTATATGGAAATATTTTCGATTCTAAATGTTTCTCGA CACCTTAAAAACAAAAGTTTTTCAAATTAGCTGTCAGTAGAAAATTGCAA TTACGAATAACTTTTTGAAGTCAATCAGTGATTAACCTTTGGTTTTACTA ACTTTAACACTCAGCATTTTATGGTTCCCTATTGTTCTTGTTTAATTAAT TAGCCAATCAAAAGAGACCATAAAATGCTGAGTGGGTAGCGGCCTTAAAG AACTTAAGTTACTGAACACGACTACAAAACCTATCCTAGACGTAATTATC AACATCTACTTAACAAGTGAAGCTTGAAATATAGGTACCTTTTTGCCTTG AAATTGTGTCTAACCGGCACATAACTGGAGTTTCGGAATTTTCGAGGCTT TTGTGACCTTTGCTTTTATATATATTCTGTGAATCCTTTGTGTTTATCTA AACAGATATTTTTTTATTCACATTTATTTTATTTATAACGTTTTTGTCTA ATTCTTCCAAAGATGATTGATTACTGGAGAAAAAGTTTTCGAATCGATCC TTTGAAATCGAATCTTGGGGTTGTTGATATACATACGGTAAGTGGTTTTG TATACCTCACTTTCTTTCTTGAAATTATTTGGCCCTACAGTTGACTCTCT CTAATTCGATCTTCATGAGACCAAAAATTTTCTTCGAATTAGAGAAATAT TTTAATTATCGAGAGAGTAATTTAATCCACTTTCCAGTTGAGGGGACCAA TATTTTAGTTCGGATTACAGAAAGATTCGAATAATAGAGGTTCGAATTAG AGTGGGTTGATTGTATTTATAAGGTAAGTAATGTAATGAAAACGGCAGTA ATGAAAATTACTATACTATATTACGTATTCGGAAAATTCATTCAATTAAT ATTTCCTTGTCAAAAATTTCTACAGTTTAAAATTCAAATGTTCGTGTCAT TCAACTTTTTTTCAGCAAAAGTCAACTTGGTTTGAACTTGCTGAAGGTGC AAGTGATCAAGAAGAATTCAAATCAATGACCAAATGGTTGTCATCTGTTT ATGATGGACAAATTGAATTTGTTGCTATGCGACCAGCGGAAGAAGTGAAA AAGGAAATGATGGAAGAGGCGGAAGTGAAGAAACGAAAATTACAAGAGTA CAGCGAAGAAGAAAATGAAGAAGACGTTGAAAAGGATGAGTTATAGTTTC TTTCTTGGCTAGGGAATTATTTATTTTAGTACTGCCCCTTACATTGTTTG GAGTGACAGGATATTCGAAATTCTCTCAACGTCATTTTGAAATTGTCACA TCATAGAAGTCACGTGTGTAAAAACAAGAAGAAACGAAAATTAAAAGATG GTGAAGATGAAAAGGGTGATTTAAAGTTTAATGGTAGAGCCTCTTGTTTG GAAATTATTTATTTTAGCTATAGTACTAGTACTGCTTATATATTAACTAA GAATTTTTCTGTTTGGCTAACTTTAAATTTTGAGATTGACCCTTTTTCAT GTAGATGGGATTCCCCTCACTATGAAAAAAGGGCCAAGCTCAAGTTTAAG GCTAGCCTAACAGAAAAATTCTCAGTTTTCTCAGGCACTAATTTTGAGAT TGGACCTTTTGCCTTGATGGCAGCGATATCTGTATTACTTGACAGGCTTC TCTACAGCAATGAAAAAGAAAAGGTTTATAGTCTAACTTCTCTTCTCATA CGTTTCACTTGGAGAATTATTTGTTATAGCTTGTGCATATAATGTAGTCT GTACACAGACCCGATATCTATGGCTAATTTCAAAAATTCATTGCCGTAAA GGGTCTCAAGATTCGATCGCGTTCGACAATCGAATTTCAATGGGTCGATT GCGTTCGATTTAGTTCGACTGGTGCGATCGTTGATTCCATTCGATTGAGA TTGTCTGGTATTAGGTATTTCTTTTGAAGAATTTTAAGTTATTATAAAAT TAGCATTATAAGGCATTTTACATTTTTTATATGAAATAGTATTTTATATT TTAGATTATAATGGGCTTAAACTCAAAAAATACTTACTATGCAATTTATA GATTATTCCTTTTTCTTAACGTTAAGGATAATTTTGACTCACACCCAGGG TCGAACATTTTTCACTTTGTAACTGGGTAGACACGGTTGATTTAGTTAGT TTTCCAAGAAAGAGC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00053848TCONS_00053848Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00053848-proteinTCONS_00053848-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_234supercontigscaffold_234:417652..426466 -
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
CASQ2calsequestrin-2 precursor Homo Sapiens
CASQ1calsequestrin-1 precursor Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
21.63 21.94 21.3 18.57 26.19 18.69 20.03 21.37 15.12 14.17 11.4 9.92 9.27 8.73 19.6 23.99 24.24 27.08 7.52 12.46 14.82 15.1 20.2 19.3 11.94 14.62 11.13 8.9 33.9 26.08