XLOC_034140 (gene) - C. hemisphaerica

Overview
NameXLOC_034140
Unique NameXLOC_034140
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_24:19144..28808-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_034140 ID=XLOC_034140|Name=XLOC_034140|organism=Clytia hemisphaerica|type=gene|length=9665bp|location=Sequence derived from alignment at scaffold_24:19144..28808- (Clytia hemisphaerica)
NNTTCCTCTCAATTTGATGTTACACTCATCTGTATTTTGATTATCAATTT
TACCAATCTTCCTGCTCCTCTCAAAGGATGGAAAAACAAAAATCCACCTG
CAACTGACTTAAGTATCGGTGCATTTGTAATTCGTGCGAGAGAATGGCGA
AACTACATTCACCACACGGATCCAGATAAAATCAATCAAGCACAATTTAA
TCAGAAATGGACTGAAGGAGAACAAATCATCAACAATCTTGGCTTTACTT
ACGACACAACGCAGTTGAAAACAATGTTATTGGACCTAAAGTACGAGAAT
GTTGTCAAATCTATGTATTTGTATCTAGAGAGAAAGCAAGAAATACTTTC
TAAACAACAGATGGCGCTGGAAACAAAACAGACGGCGCTGGATACCAAAC
AGACGGCCCTGGATTCTAAACATACGACCCTAGCAGACAATCAGGCAACC
CTTGAGAATAAACACAAATCTATCGACAACCAACAAGCATCATTATCTCA
AGATGTTACAGATTTACAAATTTCAACAAGTCAAAAAATTGGCAACCTCG
CTCAACAGTTATCACTTCATCAAAATCTCAGTTCGGAGGAAATCAAAGCT
TTGACCAACAGACTGGAGGAGATTGTCAACATACAGCAAAGCATGCGCAA
GAATTTGCCAATGATGAAATATCATTTAGGTAAGTTAGGTCCGAGTCAGC
TTAAATGTTTATAGATTATATTTTTACAAACGAACTAGCTCTTCCTGTCA
TTAACGAAACATGATTTTACACTAGTCAAAATCTGATCGAACGTAATTTA
TAATATAACTCTAGCGGGAGTAGGACCCCGGGGGGCAGTGGGTTTACCAA
CTGATGGTATGTGCGGCAAAAAAAATTGGCTTTTAGAATCGCACCCTTAC
AGTGCAGAAAAAATTCGGTGAAATTCATACCTTTACAGTGCATTTTTTTT
CAAATTTTAAACTCTTTTAGAGCAAATATATTTTATTGCAAATATTTGCA
ATTTTTCCTAGATTTGCTGAAACTTCCAGCCATACAGCGCATTTATCAAA
AATCCACCCTTACAGTGCATTTCTGATATTTTGAAAAACANNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCCCCCCCCCCCCGG
GAGTAGGACCCATTCCTAATGCATTCGGAGGGCTCATATCTATCACAATT
TGAACTTCGGGCGAGAATTGTTATTTTAGCACTTCGAATTTATTTTATTG
GATTATCGTGGGAGGATTTCAGTGGTTTCTAGCCGGTGTTTAAAATATTG
ATAATTCTGTAAAAAAAATTACTAAACCAATAACTTTAATTTTCAGTATA
GCTGAAAGCATGGCTACTCAGCTCCATTTGCTTGAAAATATAATTCAGAA
AGTTTTTTAGTTCAAGATATATCGAGTCTTATGTACACAAGGGTGCAACT
TTCGCAACTTTTCAACATCGAAGATGAATTCAGTTATTCCAAAATAAGCT
AACTTGTAACAAACCTTACTTTGGAAAAGGTAGAAATTTTCATAAAAGTT
AATTTTGTATCCAGCGAAAAGAAAAATTATTATTATTTCCATTGCTGAAA
GATTTATATTCAACCAGCTTTTCATTGACGAGAAATTAGACTTGGAAGGT
GCATAGGTTTGACCATTAAAATGGCATATTTCATCGAAATGACGTAAAAG
AGAGCTGTCAATCAAAAGTTAATTAGCTTTTTTGGTTTGAAAACTTTCTA
TCTCGACTTGTTTTAATCTCCGACTTGGCGTACTTGAAGTTTCATATCTC
TAAAACTAAGACTTTTTTCACAATGAAATTTTCACCGTAGAACGCTGAAT
ATATGTGCATTGAGCTTATCTTAAAGTAAATTGGTTAAGCTTAACGTTTT
TTAATAATTCGATTTTACTTTTGGAGTATACTTTTTTGCGGAACACACTG
TATATAAAGCTACAAGGTTCTTTGTTCAAAGAATATAATTTACTGTCCTT
TGAAGTTGTTTAGAATAGGAATGAATGTGTTAGACTTTTCGTTCCCAGTG
ATTCCCTCCTTCCTGTAACTGCCGCTAATTTTAGTATATTTTATGACCCA
ATTACGATGTGAATAATTAGATGTCTCGTGTGTATAGTTAATCGTTATAT
GTTGTAATGTCTTGGGATTTCCCGTTTTGAATAAATCGTTCTGCTTCGGT
TGTGAATGTCAATGTATGTTAAAAACTTAAAGTGCTGTCTTGTAAAGAAG
TGTTTGTGGAAAGTGTTTTCAGTAAGTAAATTTTTGTTTAACATATTGTT
TCTTGTAAATATTTCCTATGTCTGATATCACTTATTGTGTTATTTTTAGC
CGTTATTTCATGAGATGAAAGACGCGTAGAAGCCAATCCACGTAACTGGC
GTCCTTTAATAAGTTTCGAGGTCTCCAGTGACACTTCCACCTTTAAATGA
TTTTTTGTAGCATTTTAATTGCATTTCTCATCAAAATACACTTATCCAAT
TCCCAAATGAAACTTTAAGCTCCTTCCGAGATTCAAACTCATCTAGTAAA
TTACTAATTATACGTCGTTACGTTTTAAATTTCGAGAAAGATGAAAAAAC
ATGCTATGTATAAGAAATTGAATATTGGAACCAGAAATGTTTAAACTTCA
ACCTCAAAAAAGCCACCGTGCCACCACGTGCCACCAAAAGATTTTCACAC
TACAGTGGAGCTATGAGACTGACGTCTAATATATATCAATCTCAGCTCTT
CTCACAAAAATATTGGAAAGATATTCCCAATTCAAAATTTTGTGTCATTA
TAAGCATTTTGTTTGATTTTACTCGTCTGATGATGTTTTTCTCACACCAG
ATTTCATAAATGTATTTGCTTGGTATTCTAGCATTTATTTTCAAACTTTT
AGCCAGCAAAATTACGATCAGAAAAAGTTGAGAACTTTTTTAGAAATAAG
AGTATTAATCATTTTTCAAAATCAGAGTCCTTCGAGCCGCCATGACAGTT
GTCCTTTGCGGACAAAGCCTGTTCATCGATTGTTTTCTGAAACAATAGAA
GACAATACTCCGCTCTCCACCGTTTCATTCGATGTTCATCCAGAGTCTCT
ATAATAAATTCATGATGAAACAGTGGCGTTATTCTTTTTAAAAGATCTGA
TTTTCGTAGAATTAATTTTTGCGATATGAAAATGAGAGAATGTCGCCAAA
AATGGGTGTTCATGTGAAGTACAAAATTCATAAGGAAAAATTAGTTGCAG
AAAACATAAAATATTACCTTGAGCATGTTTCTTAGTCTCTAAATATTTCT
GGAACTGGTCTCTGCAGGTTGCTAACGCACAAGCTTTGTTCTGAATATCG
ATTTTAACCACAAACTCCTTGAACAATCCGCACAAGCTTTGTTTCTTGGA
ATTGGTTCAAGGTGGGTTCAGCAGTTTTTCGATTTTGCGCTCAACTTTTC
TCAAATAATTTCCCATACAGTTTTTATAGTATATAATATCTTTTGCAAAA
ACAACTTTTATACTTTCCAGGAGACTGCATCGGTGTACACTTCATCTTTA
TAATATTTAATGGCGGAGAGAAAGGAATGTGTCTGCTTCACAAATTATGC
ACCTTGTACGCTGACAATCCTTAGTTTTAAGTTGATTACAAATAATGCAG
GGTTTCGAATCTTTATCGACTTTGGGTGTGGCGATAGTCTGGTCTATTTT
CAATTTTTTACTGCTTCGTGCTTATGTTATGTCCTGATGTACTGGACTGG
GACTGTANGGGTGTGGCGATAGTCGGGTCTATTAGTTTCAATTGTTTACT
GCTTCGTGCTTATGTTATGTCCTGATGTACTGGACTGGGACTGTACTCGT
CTTGCGGTACGTTTTCATCATTTTCTAGTTCACGCTTTTTTCTGGGATCT
GTCTGCCTGATTCTTATATTTTGAATAACAAGGTATTAAACGGTATTTGG
TTTCTTTCTGATCCACTACCCCATAAAACAGATCGCCATTCAAAGAGTTT
GAACATTCTAACAAAGTTTGAATTCCAGTTGGTGTACTCGTGAGTTTTGT
ATTCCCTTGATTAGTTTTCTTTTGGCAAATGATACATTTATTTAAATCTT
TCTTAGGTTTGTTTTCCACTACTAATTAGCCTCCGTCTCGGAAGAGGACT
GGACCCGAATTTGCGGACGTTTTCACAGTTTCACTTTCGTTTTCGGCTAT
ACGACAGCGTTTTCAAGCAGAAAGCAGAGGAAATCTGTGAAATTATGGCA
GGGAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNGAAAAAAAACATGGCTCAAAGTTTTA
AAAACAGAGCTAGTCAGAGCTTCAATTCAGTAGGTATAGAGCTTTCAAAA
TTTGAAAACAGACACTGCATTGGTTACAATACAACAAGCCTACAAGACAT
ACTATCCACACGGTTTTTTCGATTCATGAAAAAAATAAAGTATTTATCAA
AAAAAAGTTCTCTCTTTTTTTGGTAATCAATTCCAACAAACAACAATCAA
TATAACAGTTTTTTGAAAACCATCCCACAGTGTAAACATTATCAACCAAC
TAAACCCACANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNTCCGTAGGCAGAAGTTGTAACATGTATTATGTGTATAAT
TATGTCAGTCGACTTGAATCATGATACATTACTCACATTTCACTGGATGC
ATTTTCGCTGTGAATATATCCGCAAAATTTTCTGACCGCGTTCTGAGACG
GAGGCTAATTGTAAACTACCATGATCCATTGCCATGTTAAACTCGCAGTG
CTCATTTCAACTTACCATGTCTTAATTCAACTTTCCATCTTTCTTGCAAA
ACTAGTTAACAAAAAATTCAAATTCCTCTTCAGCGTAAAGAGACGTTTCC
ATTCATTAAGAAAAAGAAAATTTTAGATAAAAAGATCAATAGTTCAATTA
TGATTCAAATAAATGATTCAATTATCGCGAAATAAATAGAAACAAAAAAA
GTGTTAAGAAAAAGGTGTTAATCTATAATATCTGCTCTTTTGAGTCATTA
ATGACGTTTAAATGGCTAATACACGCTTTTTTTATATGAATACACTTTAT
AAGAATGTCCATGATGAAAGTGGCCAAAAAATTAAGAATATGGTAAGAAT
ATCACCATCATGGAATTTAGCAACTGAACCTAAGAATGCCATTTTTAATG
CATTTTAACCTGTAGATTGTCAATTTCGATCTTAATTTAAGAATACCGTG
AGAATATTTTTGGATGATTTTCGCCAAAAAGTTAAAAATATCCATGATGA
AATGAAAACACACCTTTCTTATAAAAAAAAAGCGTGTACGAGTAGATAAT
GCTATATAAATTACCCTTCCACATTCAAACGTTAATAGCTTTTGAGGACT
TGATTTTTTGCCCATAACGTTAACCTTTTTTAAATCAGTATGAAATTTCG
CGTCGATTGGTTTCACTTTTTGCGAAACCACCAAAGGAACAATTTTTTAC
GCCCTAAAGGGCGTTCCCAGGGTTGGTGCTACCAAAAAACCTTTTAGAAA
CTTAAGACCATACATAACACGAATCTAAAGGTTTCAACTGTACGCAGTGA
TTTGCATACAAAAGTTTCCCCAGCGCTTTGCATTTTTTTTTGCATTGGGG
TCGAGCGAGCTCGGCATGACTTGATCTTTCCACCGTGTTCGATCTCTCAT
GAGCACCGGGAGGTCTTCTTTCAAGCAGCCAAGGTCTTCACAGTTGCTGG
TTTACCGCGTGTTTTGAAACCGTGATTTGGTTGCCAAAGGACAAGCTCGC
TAGCCAGCTCATCTTTGCTCCTAAAACAATGTCCAGCAAACCTGAGACGT
CTGTCCTTCAATGGTTGGCTTATTGGTGGAAGATCTCCGTGGAGTAATCT
CTTGGTTGGATGTTCTCTTCATGAAATATTCAGAACTGGCCGAAGCATTC
TTGTGTTCGTGCCATCCAGCATTTTCTCGAGGGTTTTAGTTAGGGTCCAC
GAGGTAGCTCCATATAGAAGAACTGACTTGACTGTAGCTCTGAATAAATT
CCTCTTTAATTTTGCTGATAGGTTAGATTTCCATATTTTGTCCAGTTTGT
TGAGGGCTGACCAGGCTTTTGCTAGTCTGATTTGTTACTTGTTAGGAAAT
GCTACTGCCAAGGTAGGTAAATTCTTAAACAGCTTGGATGTTTTGGTTTG
TTCGGGATTTTATTGAACCTGAATGCGCTTGGTTGAAAACCATGAACTAT
GTCTTTTTTGCATTGACACAGAGACCTATTTTGATGGACGCTTCTTCAAT
ACGATGTAGGAGGACAGTTGCATCATTGAGAAGGTCAGAGGTGATGCATA
GATCGTCGGCATGATCAGCATCAGTAATCGTATCAAAGGGATGTCCACGG
CTTGTCTGTTGTTTTAGAGTAAAGCCAAGATTCGTATTATCTTCGGTTGC
TTTCCTCATTATATAATCAAGGCAAATTACAAAGAGGTATGGTGCAAGCG
TGTCACCTTGCAATACTCCTTTGGTTATATTAAAGAAATCAGTGTCACCG
TCTGGAGATCTGACCATGGATTTTGTATTCTCATAGAGCATCATTATTGC
TGAAACTGTTTCTTCAGCTGTGCCATATGAGAGTAAGATCTAATTCATTT
TGGTTCTATTTATAGAATCGAATGCTTTAGAAAAATCGATAAATAGAAGG
ACAAGTGGGAGATTCTTTTCTTTTGCTCCTTCGATTGATCTACGATCTGT
TGATCTGTTTTGTCGGAAGCCATTTTGGTTTTTCCGCAATAATGGATCAA
TGTGTGGTCGAAGCCTATTCAGTAGCATGGTATTGTAAATTTTAACTGCT
ATTGATGTGAGGGTGATTCCTCGATAGTTGAACGCAACACCATAAGGTCT
CCTTTTTTGGGAAAAGGAAGAATGCATCCTTCTCTCCGTTTGTCAATTGA
CTGGCCTTGATAGACAGAGTTACAAAGTGATAACAGGATATCATTGAAGT
TTCTTAGCTTCTAGATTTCAGCGGGTATGTTGTCTAAGCCACATGCTTTC
TAGTGTTTTATACTTTTTAAAACAATGTCCAATTCTTCAATGGTGAAATC
ACCTTTAATTATTGGTAATTCGTGCGAGATAATATTTATGGTAGATTCGC
CAGTGTCTGTTGTCCCGCCTAGAAGTGTCTCATAGTGAGTTTTCCATAAT
TTTAGCATTTCTTCATTATTTAGGGCTTTAAGTTTGGAGTTATTGAATGA
TTTTCGGCCTGTTATCTCATTGATTATTTTCCAGGCTTCAGAAGATTAGT
CAATGGATTTTGATGCAATGTCAACAATTTTCTGGTTTAGATAATTTGCT
TGTTCCGATTTGTATGTATTTCCAGCGCCTGGAGTAGTAGTAAAATGTAA
ACATTGCTCGAACCACGTGTCATTAAAGAGAACAATTAAAATCACGTGTC
CAAAACAAACTTGTAAAACAATTGAACAATGTCCCTTTAAGAGTAGCAAT
TAGTTGCAATTGCGTCTAATAAGTTTATTGAATTTTCGATAGTCTGCGGC
TGGGTCAGAAGCTATATTTTTTTACGCGGCCGGTTTCCGGAAACACTACA
CTTTTTTATTTTCGCCTTTTTTCCACGAAAAAATGTGTTAAGAACCGTCT
TAGGATTTAGCTAGAGAACAAAATAGAACACATCAATCAATTTTGAAAGC
ATTTTCTTAAATTCTTCGCAGGGATTAATTTTTCAGTTTTGAGCTCGAAA
ACGTTTTCGCGAGTTTAAAAAGCGAACATTAGTTCCTGCCTGCAAAAATC
AGTTCTCTTAAGGTCTATCCCTGTCTCTTTATTTCAGATGTTCTTAATAG
ACATCCCTACTATCATCGGGACTTATATCAAAATTTCTTGAATTTTGTTT
CCTAGAAGATCTGAAAGTCAATAACATTTCATATGGAGAGATATTACAAA
TTAGTAACGACGCTTTACTTTCTTAATTTAGAACCCAGCCAAACCCTCCG
CCCAAGCAAGAATCTCAGGTAGGTTTAACCTTATGTTGTTTAAAAACTCA
AATTGATAAATTTTTGCCTGAAAATGAAAAGGACTCTTTTCAACTAAGAT
TATCTAACATTTTTC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00054098TCONS_00054098Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00054098-proteinTCONS_00054098-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_24supercontigscaffold_24:19144..28808 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0.11	0	0.13	0.42	0.19	2.52	3.26	4.16	6.98	7.07	3.84	12.49	10.56	8.87	9.85	9.75	7.08	19.25	18.96	5.67	6.39	3.07	5.05	7.13	5.45	11.88	10.72	11.02	9.6