XLOC_034208 (gene) - C. hemisphaerica

Overview
NameXLOC_034208
Unique NameXLOC_034208
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_242:730349..736270+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_034208 ID=XLOC_034208|Name=XLOC_034208|organism=Clytia hemisphaerica|type=gene|length=5922bp|location=Sequence derived from alignment at scaffold_242:730349..736270+ (Clytia hemisphaerica)
tcGTTGAATTTTGAATAGGGATATAATCCAAGTCAATTTCTCAATAgggc
tgaaatttcagagtaTTTTTCTggcggggacgaaatttttaccaaatttt
ccagtggggctggggtccaaGCCGGTCTGTGACACTGGGGTGTAGTCTAG
GAGggtacatatttttttaaatataagcAGCTTCAATTTTCGGGTCAGCT
GTAATTTGTAAAGTAAGTAACATggaaataaaatcacgtgaacttttttg
agTAATCAAATGTTTtaactgcattgatataattttgcaagcCGTTTATT
CAGCAAacatttcttattctatatttTTCGGGtgcttcgaaaaaaaatta
agaaaaactgtggaaaaagaaaagaaataggAAATCGAACCCAGTCCCTA
GGTTTGCTATTTTTATGATTCAGAAAGCGACAagtgcaagtggctctggg
tacgtttcatacattgagtttcaagagcccgaagggctagaggcaaaACT
TCAACCCTTCTTAGGCAAGAGAAATTAAACCCACTTATTTCCCAACCAAA
ACACgctagaacgcgccgtaattaTGAgaacggattgtatctagcgttTC
CTTTGTTTCGGAGGACTACATTtcttgaaatctagcgatagattttagtt
tcaatctggtgtttgtgtaaaaactacgcacgggcgttctggatgggaaa
taagtagtttcattttccatccagaagtctcgcctctagcccttcgggct
tgaatcTCAAtggtttcataaattacgtcaagagcaacgcttacctcatt
tacaaaatattactaatactatggtaattgattcccagaggagttcataa
gaagttCAGTTCATATTTATGAAAGTAACACTTTGAAGACTCAAGTGATA
TAATGGTCTTGGTAATTTGTCAGTCGTTGTACTCAAAACAATTTATCCAA
CCAGGTAATCAAACTTGCAAATGTTTTAATGTATATGACAAGTGTCAAAA
CGTATTAATTTTTTGTCGATCATGTTATACTTATTTGTTGTTGTCAACAC
TATTCCGAGAGTATAGTCATTCTTTTAATTCAAGAAACACAATCGACAGG
AATTGCAAGGTTTTGGATGAACTGCTTCAGATATCAAAAATTGTAAGTTG
ATTTGCTTATTTTTGATACTCATTTGAGCATGGTAGCTTTTCTttaacat
ttcaacttttcaaccTAGGAAATTTCCCCCTGGTAAAAGTAGGTAAAGGT
CCCACTGGGACTCCTTTTCACTataaaaaatgtccaaaaaatcgtcccca
gtggtgaattatactctaatttttggtTCTGCTAAAAATAATCAGATAGA
CAAGTCGTCACTGCAAAAAATATTGTGATATTATTTatctccactgaatt
ttctagctcgaaacaatgaaattaaaatactcagccataaaaaacatggg
aatatcgatccccatggaccttttcgcctttccgtccgccatcttgaatt
gtatgcaaaaatacaggaacgaaaatgccgtggttggatttagttgaaat
gtatgcaaaacatatacaagtttacacaaagattaaaaagacaacaaagt
atcttataaacaaatattataatcattagaacaataaaagatggaatttc
ttaatccaaaaggaaatatttacagaacaacaaaagccttttaggaattt
gttcttaaagacaNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNagtacacaca
tcaaactttcaaaacacgcaaactgaaagcagtaattatgacgtcacact
ttatcaatgttttgatttgatcatttggcggctctattccgccaagagaa
taatttgccgtcagccgaataaggattgttttttaccttcgcaggtgatt
tttcagtttgagtttctgtctaatgttatggtcttttgaagtgcttgttc
taNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNgcatactttctaagggaatttcaccacg
gcaattcggccaccataatttttgcatacaattcaatatggcggatggaa
aggcgaaaaggtctattgaattttggtccgttattttaacccccactggc
tgaaaaaaaatccaattaggtatgtgagaagggggtgtttagaTCAGTGA
CTTTGTGGCCTTTtgaggtacacgttttttttataagaacatccaaattt
ttgaagccttcgaatgttcatGACTTTCTGAGcacttttttccattttcc
aagACATCGGGTGTTTtggagtccgcaaagccttaaaatgttctcaacct
gttcttaagattttggccaccgaagccttatgctcttctatagtttgttc
ttataatccTCCATAGTGCTTCAAATCAGAAAAATATTTGTCagttttat
tatttcaaaagaaTCTTGTTATTTTTAGATTCTTCCCTCTTGTGAATTTG
GCAAATGATGGTTTGTTTGTCGTTCACTGTTCTTGAGAAGTTCAAGGTAT
ATACAcggttcttttataagaacatccaaaatttttgatgcctttggatg
ttcttaactttttgagtttcaagcctaaaaatgttcttaacatgttctta
gttgcaccattttgtgagtatttttgctaatttccctaaaaaatttggtg
ttttagagcccacaaagccttaaagttttaaaaatcttaacattttggcc
atcttATATAAAAGAACGTGTTTATTGAACATTATTAGACTGCTTTTATG
AAAAATATCAGTCTTCTCTAGAGTTAAAAATATTTAGCTGGAATCTAATT
GCGAATGGcctaaattttaatgaaaacttaACTTGGCGGCTTTTGGTAAA
TCCCTTTCTGCCAGAATTTCTTCCGATTTTGAATAAGGAATTTTGAGAGT
CATTTTATTTCCAGGATTCGAAATGGAAACATCCAAGACCCTTGAAAGCA
AGAAAGACTTTCTGTTTGAAGTTTCGTTGTGAGAACCGATATGTAACTGT
GGAAAGATATCTTTGCGAGCTTCGCAGACAAATAGATGTAAGATATCCTT
TATTCTTCTTATAAATATTTTATTGGGAGCTTTTGAGGCTCAGAAATGCC
GGAAAGTAAGACCAACTTTGAGCATTTAAGGATAATCTGATTTTAccgtc
gttttttataagtttccaaTTTCCCGGAATCTTTCCGCTATCCCCCCCGG
ATAACCGGTATGAGATTGGAAAGGGCTTTTTCTAAAGGTACGGGAAATCT
TGTGTTTACACACGAAAATATCTAACCTTtcgaagctcatttttcaacta
cGCGAAGTCCTGACCTTTTTCCGCTAGTAATGTGACAAAGAAATCTTAAT
GCAGAAAATGGGAAACTTGCAAAAAACGATGGTACCACATGAAAAACCCC
CATTAGTCTATTTATTAAATGTCAGCCTAGAACCATTTTTGGTACGACCT
TGCATGCCGGAGCCAAGTACTCTACCTTTTTGCTATGTTCGAAGCACTAA
CACTAGTGAGGGTAGGTGTAAAGGTGTAAGCAGTAAAGGTGGTAGGGCGT
TGTGTATTCatgtttcatttcaattttaggAATACAAGGATTATGTACAA
GAAGCTGAAAAAGAAATCGAAACATTAAAGCAGATTGGAAAGCACTCAGC
TGACGGTTCGAAATTAACATATATCTGTGAATCGAGTAGTTTACACGACA
TGGCCATTGTAGTATACATTTTACAAAATGTTTCAATTATATGTATcttt
tttattcagtatattAATGATCTTCTTTTGTGGAAGCGAAAGATCAGATT
TTATCGTTAGATCGATCATCATAGCCTCCTTCACTTCCCCGAACCAGAGG
CtgatttagaaatttaaaaGAGTGGTGTATATCTGCCATTATGTCGTAAC
AGCTAATATcatgtctaaggaggcgccagcATGGTTGGTGCCGACGGGcc
agaacatttttgaaaatcagaccttctagattggctaaaataGGCCTCAA
ACGGTTAGCTCGACAAAATTGTCCCTGGCAATAAATGACCTCATCTTAGA
CCTCATCGGAgatttagactggagtcgtttataatgcatgtaatacagta
gtataggcgttgtATGATAATACGTTTactgttacgggatttagtttgta
taaaccactggaagaatccggtgttctgGCCTTTTTCTTTAATGCCCTCC
AACTTTTTTTGTTCCTATTTTCTATCAAAGATGATTACTTATTTCCTTCC
TCCTGGCAATTGATCTAGTGGTCCTTATGTGATAGGCTAAGATTTTAAGA
TTTAGTATGTTGTACTATTTGTTAAAATCACTGAAATAATTAGGTACTTT
TCTGGCTATCCCTGTCTATATACTGTTGTGTCCAGGGGAGTGATTGTTTT
GAGAGGATTGTGGGTTTTAATAAATGTGATGTTGGTATTGAGGTGTTACT
CTTTTTTTAGAGAGTCTTTGCTCAGGATTGTGGGTAGATTACTAGATTAA
ATACGTTTTCCTTGATCTAAAACTTTCTTAgcagctttttaattttttct
ttgttataaCTCGCTTGCATACTTTTGATTTAGAGTATTACACGTTCCAA
TAAAAACCAGGTAAAAAAACGCTTagtaaaaactttgtaaaaattGTCGC
TGTAtataaaatgatgaaatttctaAACTCAAAAAGATATCTGTAACTGG
AAggatttttcagcttgaaagcacttaatttttttccatttgacAAATAT
GATACTCAAAATTTAACTCTGGTCGTGTTCGATGGTTTTTGTGTGATCAA
TACATAATCCACAGTTACTGATTATCATCATTGAATGTATTATGCTAAGA
TTACAGTAAGACACTCCTGTGCCACGGACTCGCTGGCcagccccagtgga
aaattcaacgaaaatttcgttcccggtgggaaaatgctctgtaatttcag
ccccactgggaaattgactttaactTGATCCTCatttgatattcaatgtt
taaaaattgtacttcaaaaccatcctcactggaatttttaaccttggaac
aaatataatttctatccccatttggatttcattaggaatttttatccaaa
CTGAGTAAATaaggggctgtgagacaggggtgtactaaAGTATGATTATA
AAGATTTTACAGATCTCCATTTTCAAATGCATAGCCAATACATTGATTAG
TGCGATATCGAATCATCAGCATTATTTCCATTCATCTCAAGATTACATTC
TTTAGCTTTTAGTTGTTTCCTTTTCTCTTGATGATATTGGTTAATGAAAT
GACCGAGTATAATGACCAAGATTGAAATCACTAATGCTAGCACCACAGTC
AAAATAAAGGAGATATGCGTAGGTGTAAATGCTGGAGTTGTTTCTTCAGA
ATTGTCTTCGGAATCAATTGTC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00054232TCONS_00054232Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00054232-proteinTCONS_00054232-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_242supercontigscaffold_242:730349..736270 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
28.4	26.84	26.75	28.89	4.87	3.71	2.56	2.41	0.85	0.73	0.52	0.52	0.29	0.47	0.22	0.21	0.13	0.26	0.46	0.21	0.73	0.29	11.21	10.2	0.96	0.81	2.09	5.95	2.98	3.68