XLOC_034215 (gene) - C. hemisphaerica

Overview
NameXLOC_034215
Unique NameXLOC_034215
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_242:988628..998664+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_034215 ID=XLOC_034215|Name=XLOC_034215|organism=Clytia hemisphaerica|type=gene|length=10037bp|location=Sequence derived from alignment at scaffold_242:988628..998664+ (Clytia hemisphaerica)
aaattNTTTTGGACACAAAAGCCGTCATCTTTCAAAACCTAAATGGCAAC
AAAGGTGAGTCATAATAAATACTATTTCTATCATTTACCCCCTCGCGAGT
ATCTTTCCAGTgatgtataactttttaatttgGAATTGCTCTTAGCGAGT
AGCTGTTGCTGGTAAATGCGCCCGAAGTCAAGCCTCTGCAGGGATTTAAC
AGGAGAATGAATTTTTCATGAGGATAGATCATTAGATCATAATTAATCGA
GGTTTAAGGATTTGAATGTATATGTATTCGGAGTGAACTTTGGACCAACA
CCCATACTTTATACACTTAGACCAGTCCTAATATCTTAAAATCATAGAAA
AGTAAATATATGTCGTCCATACGGGcggcatgaaacttaaagttctaaac
aataaacaaatctctttcttttaatttgaaaagcAAATATATAAACTTAC
AATTTAACATggttgttttcttgttttcttgtttaTCAGATGATGTTGAC
ATTGATTTCAGTGGCAACTCTTCGTCACCAGATACAAAAGTTGACAACAA
CAAGATATNGATTTCAGTGGCAACTCTTCATCACCAGACACACAAGTTGA
CAACAACAAGATACACAACAAACGTTTTAACACATACCCTGCTGTCATTC
ACGGTAACGGTCCAAGTAAACTGGAACTGGATCGTCTGTCTAATTATTTC
CCAAGGGAATGGCATCCTTCTCAAGGTTGTTTGACCTGTGATGATGGAAA
GTTCAGTCTGGCTGAAAAAGAGGTTGAGAATTTCATAGCTACAGTCTTTT
ATAttcttttcaaccaataagatttaattaTAATTCACTAAAAGACTTTT
CGTGGTGGccctttcttcattttctaagTCTTCCAATCTCAATTTAAAGG
AGTTAAAACATGCGACGGCCACTTGACAACCTCCATGAGCTTTTTGTCAA
ATAATATTCTGAActtaaattttatatgaaaaatCTCCCTCAAAATACAC
ATTACATATAACCTTATTGCTATATATCTGGGCTAATGACTTAACATTTT
CATAGAAGTTAAATATTTTAAGTTGAATTCTGACCAATCTCACAGGTTGC
GAAACTCAAAAAATCTACTTGCCAACGCCTTATGAAACTCTTTTATGGAG
TCTTTGAAGGTTGTAAAATTTCATAAGCAAGTTCAAGtataattttcaat
aatttacaTAAATTTTAACAACAATAACCATATAAACATTCACTTTACAG
AGGAAACAATGGCCAGTTGTTGTGATTGGATTGTTTGTCTATCAACCGAC
ACCCTTCGTTGCCGGCTTTTTGGAGTTCGTTTCTAAGTTGGATTACCCAA
AAGACagaattttcatctttctttATAATAATGTATGTATGTTTTCTTTC
TCTCTTCTCGCAAACATTTGCGAGAGTTTATGAATGTGCGTTTTTAGCGA
CAGAAACGGTTAACGTCTAGatcctgatcaactgaggacgacggtaaaca
agcacttttaccgtccttcgattttgcgggtcagaactacGGGttcttcc
aaatcgcttcagttaTTCCACCGCCCTcgaaagtgcaaatacatattAAA
TCTGATGATCAAACCAGCCCCCGAAGCAATAAAATGTTTGTGTGCTCATT
GTAAAATTAGTTTCATTTGGACGAGAacaattagtatatgtaatcacatt
ataacgagtgcaattcgaatataattgcacgagtgatttttttgttatta
attttccgagtccgaaaggacgaggaaaattcgaaacaaNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNtcgaaacaaaaaaaatcacgag
tgcaattttcgaattgtacgagttattatgtgattacgagctaatcgcac
aatggctgtcactactttttcccagtaaggaaagtaaattacagaaatta
cactgtgagttttgtatttttctcttctctttatgtctttcttttattgt
tgcttattgattttctttctcactaaataaatttcgaatgcaattaaaac
gttcgatgcaaaaaaaatNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNgcaattaatcgttaattgcatcctgtagagagcaattaatc
gttaatcacactcttcaatgaggcgccaatatttacaaaattgattttaa
tgttttttcttacattatttttgcatcgaacgttttaattgcattcgaaa
tttattttgtgagaaagaaaatcaataaacaacaataaaagaaagacata
aagagaagataataatataaaactctcagtgtaatttctgtaatttactt
tcctaactgggaaaaagtagtgaaagccattgtgcgattagttcgtaatc
acataataactcgTACAATTCGAAAATTGCACTCGTGATTTTTTTGTTTC
GAATTttcctcgtcctttcggactcggaaaattaataacaaaaaaatcac
tcgtgcaattatattcgaattgcactcgttatcatgtgattacatataca
aatCAAACTATTGTTTAAACCAACAAGTTCTTCAAGATAGTTGATATTAT
GGCATAAATGTGTAACTAAACATTTTCGTTCATTTTCCCATGCATCCCAT
GTATTCCTTACACAGGAAGAATATCATGACAACGATATCGAACCCTGGGT
TGCTGAATATCAAGAACAATACATGTCATTGACATACAAAGGACCAAAAA
GTTTCATAACACCTGATGATGCAAGGACTTTGGGAATGCAACAATGTAAA
ACAATTTATTGTGACTACTACTTTAGTTTGGATAGTGAAGTCACGTTGTC
AAATCCTAAAACACTTCAGCTGTTGATTGAACAAAATAGGTAAGGTCTCA
ACTGGAAAGactgatacatgttttttagtAAGTGTCTCTATCAGACTCGC
ATTATGCTTACCATTCTATTGTTCTGAAACAATAGAGTTATTTTTAGGTA
CCAAAAAGTGAGCCTgcgcatatgcttataaacattATGCTTATATATAT
AACAAAATACTACATTGTCACTTTTTCGGAATGCCACgagacaaaataac
aaaatttcaatttagtgAACTTCAAAGCTATAAACAAATTTTCGAGGCAG
TCAATTAATCTTGTCCAAATGCTTGTTTTTAAGGACGTTCATAACACCTA
TTCTGAGTCAAAGAGGGAAGCTCTTTTCGAATTTCTGGGGAGCTATCGAA
AATAACGGATACTATGCCAGGGCACCTGACTATTTAAGCATCGTTCGAGG
TGAACGCGTAGGAGTGTGGAACTCACCTTACGTCACAAGTTGTTATTTGA
TTCGACGAGAGAAATTATCGGATATGGTTCATGACCCGTTTTATGCACCC
GGCGAAGATTTTGACATGATTTTTGCAGCCAATAATCGGAAAAAGGTATC
GCTATTGTTTTTAATACTAGTCATTCTTTTTTGTTAGACGGCCAAGTCTC
TATAAATCCCTGCCATCTCCTCTCATTTCATGTCACGACTCAACCATGAC
ACCCCCTTAAATAAAATCCTTAAAGAATTCTGTTCCccgattttttcaat
tttcttgatGTTGGTGTGAAAACCTTTGGAGgatgaaaaaaagttatgtt
acTAGTTTGTATCTCATGCTTCCAATGCCTCCGTTACTACTGAGGGAATC
TTCATTATATTTCGCCTCTCTTACTGAAACTCTCCGAAAGTAGATCGGTT
TTACTGATGAAAATTTGCAATTAGAGACTCGACGGTATATTATTTACCCC
AACTTTGAGTTGTCTGACAAGTATTTCATTTGTATTTGAGTTAAGACTTT
TTAAAGGCTGTCCAAAGCCAAGTTtctttgaaagtaaaatctccCAAAAT
TCTGAATGACAGCGTTACTTATTTCCATACCTCAGGGTATCTTTATGTAT
GCAACGAATATTCATGAATTCGGACATTTGAAGAAAACAGATACATATTC
GACAACAAAGAAGAATGGGGATCTGTACCAGCTCTTCGATAACCAATGGG
TAAAACGATATATGATttaaatgggctattccagaaaaaatttNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNgggg
ggggggggcgtttatttggcacctaagagtatgttAAGAGGTCTTTTTGA
CCAACCTGGATTTtccacctcattttactgactaCTCCGGaattttacac
tcgaaaaaacGACTCCCtggatttttattattttgaaaccaccctggacg
tcacacctacttgagggtacagactatttctggaatagcccaatagaAAA
ACAAACTTCTGAGGAGCCAAAACGATACAAAGGGCAATGTACCTTAAgag
aactttttttggtgggaactaattttcacgaacggtcgattaaaaaaaaa
atttaattttggcgagaactaattttggcgaactatgaatttttttaatc
ttggcgagaacttattttggcgaatcaacgatttttttaattttggcaag
aactttatattttggcgaatgacagcgtgaatctgttctattttgcctta
tttgaagtttttttgtgaactcaagaagttatttaggcaaaatattaaaa
tttttaattttggcgagaactaaatTAGGCGAATTTCAAGTTCGCTCACC
aatctcgccaaaataagttcccttaaggtaatgtCAATTTGATATTTGAG
GGTTACAAGACGATCGTATATCTCATAAAGTAAAGTCTATTGATTAAgtc
attttaaaaacatgatCCAACCATCATTATTCTAATTTATCTTTCAATTT
TCCATAGGATTGGGAAAGAAACTACCTCCACAAAGACTACCATAGATATT
TGAAACCTAATATCAAGAAGATAGAGGttcattaattttcttctttttgt
aaaCAGTGAGCTTTTTCGGTTGCCTGCTGAGGTTATTAAAATGGCTTTGT
ATTTTTAATGACGTGTAGTGCACAATTTCTCATACCATTCACATATGACT
TTCAAGCCAAAATCTGCGTCGtagaccttttgctaatctATGGTGACCAG
TCAGGGAAATCCTCTTAATCAAACGCTCGACTTCTGAGATTATTGAAGCA
CAGAATTTTCAAACCAATTACACGCGTATTTCACTTCTTTTTTAATGTGA
GGTGAACGTGTAACTGCAACCTTCTCAGCCTCGTTATTCTcataaatgaa
atttttcctACCTTATAAagaatctttctttcttttgcagCCATGTCCTG
ATGTGTATACATTTCCATTCGTCAATGAAAGGTGGACTAAACAAATAATA
CAAGTAAGAGAAAATATCACATTCAATTATTTTTAGACCTTAATTGATCG
AATCGTGTTCTTATGTTTTAATCAGAATCAATATGTTTTAGTCTTTATAG
CTTATTAAACTTACATTGCTTTAAAGGAGATCTGGAAATTAAGTCCTCCC
AGAATAAATTTAAGTTGGAAATTTGGTCAAAGCCCTTGAGAAAACTAAAT
TTGACGAGAAAGCCGCTTATTCGCAAAATTCAGTCAACGAGAATAATCAA
TTTTAAGAACgccaataagaacattttaggcttaaaattataaaaaaata
agcccATCCAGACAAAATTAAGAAGTTCTCATATGAAACGTGTACAACAC
CTGATATCTAtcctttttgtttgtttttactCTTTTTATTATAGGAATGT
GAAGCTTTTGGAAAATGGTCTGATGGGAAAAAAAAGGTAGGAggtttttt
atattaaaaacaactttttagtaAGTTGCCTTAGTGAAAGTTGACAATAG
TAttataaattaattttaaagcaATATTAATTACGATTTTTATTACCTGC
TGTACTGACTTTTAGAATAAATTGTagcatttgaaatgtttttattatat
gattgaaaatgatgacataaAGATCGTTGAAACATTCCTACAATATCGAc
tctattttcttgttgttttttatttaaaaatccaaggaaatgtttatttt
tgggttatgcttctttttatatatttttttaatattataaatGTATTTCA
AGTTATATAATTCGGATCATGTCGTGATTCTGGGAGGCTGGGTAGATTCT
TTATCAGCTTTTGGTCAGTAACTTGACTTTCGGGTAAATTCTTTTAACTG
GTCTGATAACTGGTACAAGAATCTATCCAGCGCCCACGGAATCACGACAT
TATCTTAAAATCTCGGTCAAAAATctcgaatatttcaattaggGAGGGGT
TTTATAGACTTTTAGGCTATATTCTAAGCCCTATTGGACTATTCTTGGAC
TCTtgtgttaaaactctacccttccaacctaatttagagcgcttccaaat
cgtttgtggttgtaagatttcgggtgaatttcccttttttctcaaatatt
atgactttaaTTGTATGAttcaatcaaagtcaatttcattTATTATAAAC
ATTTCCTTTCGCTTGGAGAAAATTCCTCTCAGTTAATTGATGTACGCATT
TTTTAAATATGGTCtttaataaaaatatgaatCAAATTATTTCAATGTTT
AGGATAAACGTGTTGCAGGAGGATATGAGAATGTTCCAACCGTCGATATC
CACATGAACCAGGTCAGGCAGTGTTAAGTAAATATCAAGCTTTTATCCAA
TCCGCATACCCTCATTGAAGAGAAACCCATGATTGCTCTTATTTAGTTCA
GAATAATTTCCTAATCAGCTTTAGAAGTATatctttttcttataaagtgt
gTCCCAACTTTCTTAGTCCCAAAAAAGgaagaaagatttttaaaaaatcc
cCGAAACTCGTTATCTAAACTGGGCTTATagtaattaaaataatattACA
AGTCTTTGTTCAGTCAATAGctattcaattcccaagatcATTGAAAAGGT
TCTCGAGATTGAAATATAAAGTAAACAAGCCATAAAATTTTGCATAAATC
ATGACAATTGAGGATTTGAccgcttttttgggacacactgacACTGTGCA
AAAAAACAGTACGGCTAACCTTGGTGTTTGTTCATTTGATAGATTGGTTA
TGAGAAGCATTGGTTGCAGATGTTGAAATTGTACATAAAACGCATTGTGG
AAAACTTCTATACAGGTTACAGGCCAAAAGTAAGTTCATATTTTTCCACG
TTTGTCTGTACGTCATGTTTGTCATAATTAAGATtagtttgtttaatttt
tacatctttatctaaaagagaaaacaaatacaaaaaccaGAAAGTCTTAA
AAGCAAAGTCAATCGACAAAATGTTACTTCAAGCCAATAGATCTAAGCTT
AATTTTTATCTACAGTGTCTGGAAAAAGCGAAACAGAATTTGTACAAATA
AAAATCCTCATAATTCATATCAGTTTTAATGACCTTCTTATTATCCAATT
CCCTCCGACAACTTTTTTTAATCTCCTTGGGGATTGAATTTATATCAATT
CAACAAAGAAATGCCACCCTTTTTCAATTATTCTAGACTTCAGCAAGATG
ATGAGATTTCGGATTTCTACTTGATACAAAAATGTTCCGATTTTTTTGGA
AACACTGCAGATCTCTATTCTATCTCTTAGTGTGTGGCAAATATGAATTT
TGTAGTCAAATACATAACAGAAGGTCAGAATTCGTTACCAGCACACCACG
ACACTTCTACCTTCACCATCAACCTCGCTTTGAACAATCAAAAGACAGAC
TATGAGGTAAACTATTTTGTTCAAATATTCCTTCTGATAACAGTTTCTAA
AATGACACTATTTGGTGTTGAgagatacacgttttctttttataagaaca
aactatataagaacagaagacttcgatggccaaaatgttaaaaacaagtt
aaggacattttaaggctttgtagactcaataacaccctatttcttaggaa
aatggtcaaaaatactaaCAGTATATATGTCTTAtgaataaatacaaaat
atagATCAAAGCAGTTACACCAAAAGAAACATGATATTAACTGTTTGTGT
TGAAAAGAATTGGAAATAATGaccaaatgtttttaacatttccCCAATTT
AGGGTGGTGGTGTACGTTTCACAAGATACAATTGTTCAGTGAAGGGAGCA
AAAGTGGGATGGGCATTGATACATCCTGGACGATTAACCCACCAACATGA
AGGGTTACCAACCACTAAAGGTGTTCGTTATGTCATGATCTCATTTGTTG
ACCCTTAGATTCAGATGTAAATACTAGTACGATTTTgtacatgcatgatt
tgactgATGGCAGTAGTAGGATTTTCACGTTTTTTAGTAATATTGAAGGA
ATTTCTTTTAGACTTTTTTAACTTGTaataaaaacttaattttgattgaa
tttctAGCTTTTTTAATCTTTGCGTATATATATCAtcacatgaaaaaatt
tgaggaaGACATAACATattatttgttgttttacatTGTATTTCAAATTG
AATATTTACAAGTTACAGGTTTTTATACCAAGAAATCCATCAAAGAATCT
AAAAACATATCTCTCATATCTGATCAATGTCTTAAGATTGTTTCACAGAA
TCCTGTTTAATAAagttaaatacaaaaaaaagtgATGTTTCGAGTGCAAC
ATTTGCAGGTTATCAGTAAACCTCCAGAACAAAATTGTATTGTTTTACTG
GAGGTACTTCATATGACCACAGACATAAGAACCATATGGTCAACCTACAA
ATTGACACTCTTTCAATGGATGGGAGTTATCGCCCACAAACCAACAAATG
GATGTCCAGGTTTGTGAACTTAtctaagagaaaaaaaacaaaggaaaaaa
taatgACATCAAACAATGAACAATGAATACTCTCCTAAATACTCAGGGAA
AGGGTCTTTCTCCTATTCTAACCCTTCTTAGATGGACACTGTTGAAAGGT
GTTGGAGGTAGGTAAAATGTAGTCTTTTAGTGGTATT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00054242TCONS_00054242Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00054242-proteinTCONS_00054242-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_242supercontigscaffold_242:988628..998664 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.12	0.21	0.04	0.15	0.66	0.68	29	31.28	38.25	37.46	22.22	38.87	17.72	17.17	20.04	18.5	0.88	1.07	0.22	0.13	0.11	0.03	0.09	0.12	0.46	0.41	0.08	0.11	0.13	0.02