XLOC_034218 (gene) - C. hemisphaerica

Overview
NameXLOC_034218
Unique NameXLOC_034218
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_242:1083348..1087071+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_034218 ID=XLOC_034218|Name=XLOC_034218|organism=Clytia hemisphaerica|type=gene|length=3724bp|location=Sequence derived from alignment at scaffold_242:1083348..1087071+ (Clytia hemisphaerica)
ttagattttaataaTGATGAAATACGATAAAGAGATGTATATGAGCAAAG
AGTATCAACATTGGCTCAAAAGTAGAACCATTTTTACATGGCTTGCATTC
AGTATGATACTTCTCTACGCAATGGAGCAACAATGTACCAAGTACTTTTT
AATGTACTACATTCAAGATCGATTTGGATTGACTGAACACAATGCTGTCA
TCTTTTACAGTATTTCGGAAGCTATCTATGCTATTGCACAAATCACTGGT
GGTATTGTATTAGGCAGATATTCAGATCGCACTCGTAATATGAAAAAAGT
CGTTCTTATTGCAATGCTTGTTTCCTTTGTTGGTAATACCTTTTACGTGT
GGCATGTTAACCTTTTTCTTGTGGTTATTGGAAGGGCTTTGATGGGATTT
ACTGAATGTGTGAACACAGCTGTCGTAGGtaagtttttttcttatttgct
GGTCTATTCACCCGGGGGAAAgagcactcgatttctaaacgaagACATTT
ATTGTGTGTGCCACCAAAAactggctttcaaaatcggacccttacagtgt
agccTTTGAGCAATAAAAAGGAAAcattacagtgcattttaccgaatGTT
TCTGACctttacagtgtagtttgaattgatatcttattttgctgaaacca
cctgaaaatgagccgCATATGTCGCGACATAATGTGCAAAACAAATTTAA
CAAATGTacatccttacagtgcatttcaagGGTCCCGACAAACCGGCACA
TGCCGTGGGCCAGACCATATAAGTCCCCCCTGGGTCTATTTGTAGGAGGT
CAAACCCCATGATCTTTCACGGTACACGACAACATATGCTTAGTTGGGGA
TAGAGAAAGGATTTTAAAGGGCTCTGCCCATAGTGTTTTTGCTTTCTANC
ACGACAACATATGCTTAGTTGGGGATAGAGAAAGGATTttaaagggctct
gaccatagtgttTTTGCTTTCTATTTTTCACATTTAGAATGTTACACATT
TTCTGTCGGGCACGAGGAGggacaaacaaaataaaaaaatcaaaacgaaa
taaacaaatcaaaaacaaataaaaaaattaaaaaactaaataaaaaaaga
agaataaaataaaaaagaaaaacaaaataaaaaacaaaaataaaaagaaa
aaaagaaaaataaaataataagaaaaaacaaaataaaaaaagaaaaacga
aataaaatataaaaaacaaaatgaaaaatcagcaaataaaaaaacataga
aTAGAGAATCAAAGATGATGAAATGAggattgttgtttttcttgctcATC
TTGTTCATCTAGCATGTTCTGTGAATCTTTTAGGACGCTAAGAAGAAAGG
CAAATCTATTCTGTTATGATTATGGGACTCCTTTTCGCCCAAGGAATAAA
GACGAGGAGGGAGAAAAAGATGAGCAATCTCTCATAACGAGATACGTTAA
CAATGGCCATACACATACGAGGCAATAATTGGGAGGGAATGCAGCTTTGA
AGTTTCTGCATACACGTGCATGAGAAGACGCCATCTTGTTTCTAGAATAA
ACATAAACTCTAGATCACCACTTTCGGTTTCTTCGAGTAACACGCAGGCG
CGCATGcgcaaaataactttttaatttttgctttgtcttttttatttagt
tttttctttttttttcactctgtttttctttttctattttgtttttcttt
tttatttgcttttctttttttattttctttttctttttttatttcgtttt
tctttttttatttagtttttcttttttttattctgtttttcttttgttat
tttgttttctttttttattttgcttttttcctttttttttgtttttcttt
cggCCACCGTAATTTCGTAGACTTTAAAGAGAACGATTTCTGATAGAAAG
AAGTTGTTGCGCGGTAGATTCGCTGGAGATGGATGTTTAAAATGGATATT
CGAAAAGGGCTAATGAAAAGTTATTGACAAGAGATATTGACttcaattca
aataaaaaacggatgacAGATGTCACCATGAGGATAAGATATTCAGAAAA
AGATTCCAAGAAGGGCGTGGTTAACATTTGACAGAGGGAAATTCCCCCAG
ATAGATATTCAACTTACTTATATAAGTGAAATCTAGTCATCTCGTCTGCC
GACTCGGGAAATGACTGAAATGATCCCAAACCAAAAAAACAGATGCAAGA
TGACGTGTGTAAAAACCATGCCTACCAATTaagaaagtccaaaaaagcGT
GGTTTCCCACGTAGTCGAGGGAAATTCCCCAAATGGATATTCAAAATAAC
TCGATCTGGCAAATTTGGAGTGCTCTCAAAACTAGCACAAaaccttttaa
cttttttttttgcacaaccTTAAAAGTCGATCTCTCCTATACTGAAATCA
TGGTGCTATAGCagataaatgaatgaataaataaatgaatgtcaataatt
atttctattttctaGGTGAGCTAAGACGGGGATACAACGATGAACCAGCT
AAAGGGAGATCTGTCATCACCTGGTATGAGATAGCTTTTCAAGTTGGCCA
AAACATTGGAGCTGGACTTCCTGTGCTTTTCACAACCGTGAATCTCAAAA
TAGGATTCTGGAAACTTGACCAATTAAACATGATGAATTTCATTCTTGCA
ATATTTTGTCTGATCGTTGCTATCATCAGTTTTTTCAAGGCTATAGATTT
ATCAAAAGAGCTAGACATTATAAAGAGTAAATATGTGGTCTCGAAAGACG
ACAATGAAATGAACGAGAATGGCGTCGAAAAGACgagcaaaaatttaatg
aaatggtCAGAGCTCTTTCAAATAGATATCATTTTGCTCTGTCTTATATA
TAGTCTTACACGATATGCAGTCGGAACATCAGTTTCTAGCCTGACGATCT
TACTTCCATTAAAGTACCATTGGTCATTGAATGACATGTTGGTCTTACTC
ATGTGTACAAATTGTGCAACGTCATTGACCATTATAGCTCTGGTAAAAAT
TGGCCTCCTCAAGAATCAAActcgaagtttttttttgtacaTCTTATCAA
TGGTTTTATGCTCGGTAATTGTAACATCGCTGATGCTTACAGAAATTGGA
TTGTTAACAAGTTTCGCAAAACAAGCCGTGTTTTTTGCTTTTATGACTGC
TTCAAAGAACTTTTTAGCCAGTCTAACTAAAATAACTAACACTGTATTGT
TGCTTCAATTAGTCAAACCCCAAGATAGTGGTTTTATATTAGGAGTAAGA
ACAGTTGCTGGTACTTCATTCAAAGGCTTGGCTTTTCTGTTATCATCAAT
TTCTTCGAAATATCCCGATTATCACTCACCCGGATTGGCGCTTGTCATCC
TGTTGACTGTTGTCCTCATCCTTTATAGAAGGAACGTACATCTTAGAAAT
TTTANTTTCTGTTATCATCAATTTCTTCTAAATATCCCGATTATCACTCA
CCCGGATTGGCGCTTGTCATCCTGTTGACTGTTGTCCTCATCCTTTATAG
AAGGAACGTACatcttaaaaattataaaaatgaataatattttctttttg
taaacagGAATATTTTGATAGCTCGTCTACTACAGAAGTGATTTCATGTA
AAGGGTaccttggggggggggggggggcactcgatttttaAACGAcagca
tgtgccgccaaaaaaatggctttcaaaatttCTCCCTTTGAAGTAAAATT
TCTCTTGATATATTTGTTTTGACG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00054245TCONS_00054245Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00054245-proteinTCONS_00054245-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_242supercontigscaffold_242:1083348..1087071 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0.02	0	0	0	0.03	0	0.03	0.1	0.05	0.12	0.03	0.13	0.27	0.05	0.07	0	0.04	0.56	0.27	0.32	0.31	2.81	3.75	3.45	3.57	13.36	13.63	0.03	0.16