XLOC_034233 (gene) - C. hemisphaerica

Overview
NameXLOC_034233
Unique NameXLOC_034233
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_242:1538557..1547626+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_034233 ID=XLOC_034233|Name=XLOC_034233|organism=Clytia hemisphaerica|type=gene|length=9070bp|location=Sequence derived from alignment at scaffold_242:1538557..1547626+ (Clytia hemisphaerica)
CCTCATTTGAAATTAAATGGAAGGAAATTGCACGCTTCAAAACGATCCTT GTTGGATTTTtttaccttggaacaatagaatttccattCCTATTGGGAAT TCGATAAATTTTCTTCTCCACTGTAGAAAGAAGCTCCtcaggggctgtga gacagggaatGTAAAAATGGAAACGTGAAGAAAAGTCATTCCTCCGATGA AGTTTGAAAAGCACCTTGCTTATGGACATTTGACTTGCGAAATATCagtt aaatatttcataaagtTAGCGAAACATCCTCTAGCGGTTTGTCCTCAACT TTAAGGAACACAAAATTGTCTTTGGGTTTTGATGGGATATTACTCCTGGT CACTTGTCCCATATCGGCGTACGGATCACGGGAGTTTTTCCCGGCGTATT TATGTAACGAATGCTTCTTGTCCCCTCGGTCAGGTGCTGAGGAGCCGGTC GATGCGTACGCACTTTCGAGTTTTGAGAACCCCCCACTTGGTTTTGCATG CTCCGTTTTCTTTTTCTGTTCCTGTGGTTTGTCCGGTTTATAATGTGTCC CGGTACTGTCCGAAGTTAAACGACCCATCAAATAATCGGTCATATCTTCA TTATTGACGTTACTGTTAGGATCACCATtttctgtttgttgtttgttctC TTCGCTAGCTTTGTCACCAGACTCTTTTTCTCCTTCTTTTCCTGCTTTTG ATTCGTCAACAGGATTAGGTTTTGACACGTCTTCAACAGGGCTTGGATTG CTGTTCAATGAGTCAGTGGAGACCCCCTTCGAAGAGGGATCTTCTTTTGC TTTCTCAGAGTTCGATTCTGAATTCTCAGCTTTTGACGGATCTTTATCAG CTGTAGTATCagagttttgtttttgaagtgaTTCCCCTGTATCTCCTCCT TCTTGTTGATTCTTTTCGTTATTTTCGATCAATTTGGAGACTTCCTTGCT CTCCTTTTCTTTTGTGGCATTTCCTTCTTTGTTTTCCTCTTTCGCCCCCT CCTGTTTTGCGTTCTCCCCTTCTTTAGCGGAATCACTTGAAGGATTCCCT GAAGGGCCATTCCCTTGCTGCTGTGCATCTTGGGATCCAGTATTTCCATT GGAGCTATCACTGTTGAAATTATTAATGGAAGAATAAGCTGCTTCGGCTT CCTTTGCTGCCATCTTTGCTTGTTCCTCTTTAGCAagcatttcttttgtt ttatctacttcactttcttttgcattttcttcttttactcCATCCTCCTT GTGCTCTTCCTTTGCATTCTCTTTCGTAGCGTCTTCACTTTGTTTAGCTC CTTGGTCTGTGGACCCCTCTTTTGGACCTTGGTCAGTGGATCCCTCCTTT GGTCCCTGGTCTGTTGACTCCTCTTTTGGACCCTGGTCTGAAGAACCTTC TTGTTTCGCACCTTGATCGCTTGATCCACTCTCTTGTTTCATAGCCTCAC CATTAGAAccttcattttgtttttgtccTTCTTCACTAGAGTTTTGCTTG GGAGCATCAGAATTATCCTGTGTTGGCCCTTGTTCGGCAGTTGCTTGATC TTTTGATTCATCCTGTTTTGGAGAATCTTCTTTGGACCCTTCTTCTTTAG AAAATTCTTTCGAAGATTCTTGTTTCGAGTCGTTCTCATTATGCGCTTCC TGTGCAGCTTTTTGGTCATTGCCTTTCGATTGCCCGTCTTTTGGACCCTC TTGTTGCCCTTTCTCTTCATTCGCACTTTCGCTTTTTGTGTTTTCCTCTT TAGGGTTTTCCTGCTTCGAAGCATCTTCGCTGGGGCTTTCCTGCTTCGAA GTGTCTTCTTTAGGGTTTTCCTGCTTCGAAGCGTCTTCTTTGGGGTTTTC CTGCTTCGAAGCATCTTCGCTGGGGCTTTCCTGCTTCGAGGCGTCTTCTT TGGGGCTTTCCTGTTTCGAAGTGTCTTCTTTAGGGCTTTCCTGCTTCGAA GCATCTTCTTTATTCTCCTCCTTTGATCCTCCCTCTTTGGAAGAGTTCTC CTTATTCTCCTCCTGGGTGTTTCCTTGAGATTCAGGTGTCTTATCATCCA ACTTGGACCCACCATCGCTCTGTCCTTGCATCGCATTCTTCAAATTATCA TCTTCATATTCAGCGCATTCAATTTCCTGACGTTTGGAATCTTCACTCGG TGTTCCTATCATCACATATGGATCCTTAAGAGCCTTCGGGATTTGAACTT CCTTATGGCGCTTTTTACATTTGCTTTTGTCAATTTGACTTTTTCTTGAA GGATGCTTCattgattttcttttagaaGATAAAGAAGACCTTTTCTTACC ACCGATATCACTATAAAGGCGTTTCACTTCTTTGCCGACGTTTTTAGATA ATGAATCCTCGTCTTCTTCCACGGCAGGATGAACTTTCGATTTCTCAGTA GCAATGGCCTTCTCGAGGTTTTCAATGGTGTTTAACTCCTCTGCAACGCT TGGTGTAGCTTTGACTGCTTTTCCTTTCTCGTGAAACTTCTTCTTTTCTT TAGCTTTCAGTTTTGCTTCTTTTCCTTCCGATTTTGCTTTTGCCACGTAT GGATCACTGGTGTCATAAGGCCCGATATGAGATTGTGATGCCCGTGTAAA CTCGCTTATACCATTATGGAGCGATTCCAACTCTTTAGCCGTTGTCTCCG AGGCCCTAGCTTCACCAGCAGCAAGTTTCTCAACCGATTCTGATCCTTTA GCTGTCTTTTCATGTCGAGCTTCGTTTTGAGTCAACCCAACGGCTGTTCC GAGATCTGCGTAAGGATCAAAAGATCGTTTGGTGACTTTGGTAGAATGGT ATCGTTTGTGGTTTTTGGTGACGCTCTTCTTCTCAACTGCTGATCCGATG AAAAGATAAGGATCCTTTAAGAGCTTTTGCCTTGCTTTCTCAATGTNGGC CTTCTCAAGGTTTTCAATGGTGTTTAACTCCTCTGCAACGCTTGGTGTAG CTTTGACTGCTTTTCCTTTCTCGTGAAACTTCTTCTTTTCTTTAGCTTTC AGTTTTGCTTCTTTTCCTTCCGATTTTGCTTTTGCCACGTATGGATCACT GGTGTCATAAGGCCCGATATGAGATTGTGATGCCCGTGTAAACTCGCTTA TACCATTATGGAGCGATTCCAACTCTTTAGCCGTTGTCTCCGAGGCCCTA GCTTCACCAGCAGCAAGTTTCTCAACCGATTCTGATCCTTTAGCTGTCTT TTCGTGTCGAGCTTCGTTTTGAGTCAACCCAACGGATGTTCCGAGATCTG CGTAAGGATCAAAAGATCGTTTGGTGACTTTGGTAGAATGGTATCGTTTG TGGTTTTTGGTGACGCTCTTCTTCTCAACTGCTGATCCGATGAAAAGATA AGGATCCTTTAAGAGCTTTTGCCTTGCTTTCTCAatgtttgtttgatttg aagCGACATCACTGCGCTTCTGGTCGTTAACAGCCGATCCTAACAAAACA TATGGATCCTTGATCGTATTTTTATTGCCAACAACCTTAGTTTCGTTTGA GGCAACATCGCTACGTTTTTGATCATCAACAGTGGACCCTATCATAACAT AAGGATCTTTAATAATATTCTTAttgttggctgatttagtttCGTTTGAG GCAACATCGCTCCGTTTTTGGTCATTTACGGCCGAACCAATAAAAACATA GGGATCCTTGatgatattcttattttcagcgGCTTTCGTTTGGTTTGACG CGACGTCGCTACGTTTTTGGTCATTTACGGCTGAACCAATAAAAACATAG GGATCCTTGatgatattcttattttcagcgGCTTTCGTTTGGTTTGACGC GACGTCGCTACGTTTTTGGTCATTTACGGCTGAACCAATAAAAACATAGG GATCCTTGatgatattcttattttcagcgGCTTTCGTTTGGTTTGACGCG ACGTCGCTACGTTTTTGGTCATTTACGGCTGAACCAATAAAAACATAGGG ATCCTTGatgatattcttattttcagcgGCTTTCGTTTGGTTTGACGCGA CGTCGCTACGTTTTTGGTCGTCAACAGCTGAACCAATCAAAACATAAGGA TCCTTGATGATATTCTTATTGTCAACAACTTTAGTTTCATTTGAAATTAC TTCGCTCCGTTTTTGGTCGTCAACAGCCGAACCAATCAAAACATAAGGAT CCTTGATGATATTCTTATTGTCAACAACTTTAGTTTCATTTGAAATTACT TCGCTCCGTTTTTGGTCGTCAACAGCCGAACCAATCAAAACATAAGGATC ATTgatgatgttcttattttcagcggCCTTCGTTTGGTTTGACTGTTGAG TTTCACTGCGTCTTCGACTATCCACTGTGGAGCCAATTAAAACATAAGGG TCCTTAATGACGTTGCCTGCTGATTTCGTTTGGTTTGCTGCAACCCCGCT GCGTTTTCGATCATCAGCTAAGACAGATCCGACTAAAGTATCAGGTTTAT AGTATTTCTTATCTTCCAAATCGTCAGGTTGTGTCAACTTATGTTGTGGG CTAATTCCTTTGGTGGTGGCTTTATCGACACGATCTCTCTTGCGGCCGAT ATCAGCGTACGGGTCaattttgactgcttttacatTCGTGGACTTTTTGC TACCCTTTGATGGGTGTTTATCCAtactatttctttttttaccgATGTCA GAGTAGGGGTCCTTACCGTTGATTTGATTACTGACTGTTTCTTTCGAATC TTTTGATTCCGGTGATTTTAGTTTCATCAACAGAGGGAAGATTCCTTGGA AAATACTCGGTTCAACTTGATCTCTACCAGCATTGGAAACTTCAGCCGGA TGTTGAGGAAGGTAGACACGTTTATGGGCCTTTTTCGTGATTATGTGTTT CTTAGAAGCAGGGTGGTGGTGATTCTTCTTGCTAATTGTGTGTCTTTTAA CAGACTTCCTCTTCTTGATGAAATGTCTTTTGACGTGTTTCGCTTTCTTC ACCACGGATCTTTTAGTAGTTTTCGTTCTCTTGTTCGTATGTGGTTTGGT AGGCTTAGCTCGTTTGCTACCCAAATCAGAGTAAGGATCACCATAGTGGG TCAGTGGTTTAGATTCCTTTACTTTTGATGGATTCACAAAGTTGCAATCA TCATCTCTCTTGGAAGCTTCATTTCCAATCATTTCATAAGGCTCACTGCA ACTTAAAAACCGTTTCGTGATTTCTGCTGATCGCCTGCTACGTTTATTGA TCTTGGCTTTCAGTGGAGTTTTAGTCGGGTCTTGGCTTCGTTTGGTCGCG ACAGTTGATGTGACGCTTTCTCCGACATCTAAATAAGGATCACGTCCCTG GTTTACACTTTTTTGGGGTGCTTTAAATTCATGCGTTTTAGAAGCATCAT TATTCTTGGAGCTTTCTTGTTTAGCTCGTTTGGTAGGGTTCGGTGAGGAG GCCCCTATCTCCAGGTAAGGATCCGAATTTTTCGCATTGGTTTTCACCTT GGATGCAATCGCTTGCTGCCCAAATACTGGTAGTGAGCCTTTGGAGGTCT CTTCCGATTGGGTAGAATTTGACTTTGGAGCAGAATTTGTCTGTTCTTCG CTAGCCTCGGGAAGTTTATGTCGTAGATTAGCATAAGGGTCGGAAGAAGG GTCTTGTGAGAGAGTTTGAGTTGAGTCGCCTTTTGAAAGTGTTTGACTTG AAACACCATTCATTTCATTCTTGATTTGTGCGTTCGATTTATTGAGAGCA CGAAGCAATTCTTCAGTCTTGGCAAGTGCTTGGTCAACTTCTCCTTCTTC GTCTTGTCCTTTCAAATTTGCTTGATTATCCTCTTTCTTCTTCTTGAGAA CTTTCTCGTTTCCCTCCTTCAATTTGTCACTCAATTCTTTTACTCTCTCC ATAATCTTTGCTCCTTTCTCTTCTTCACCCTCTCCTTTATCCTCCTCCTT CTCTTTATTTGATTCACTCGTTTCATCCTCGTTCGTCTTCTTCAGTGAAT CTCCTTCTTCATGATTCGCTTTTTTCAAAACACTATCAGCCAATGAAACA TCTTTTTCCAAACGTGGATCCATGTGTAAAGTTGCGTTGCTACCAGACAC TGGACCCGCCATGTTTTGAGTTACATTTGATACAGTTTTGTCAGTCACCG ATTTATCAACAACATTCGACTTGCTGTCACTGTCACCCTTCTCACCCCAG AACTTCGAGCTCTCTCCAACATCTGCGTAAGGATCACTAAATTGATGTTC AGATTTCGTAGACGCTATCTGATGTGTGTCAAACGATTCTTTAAGTTGCT TTTGCGCTTCAAGTGCAAGTGATGACTCTGGTTGAGTGTTGCCCTCAATG TTCGAATTCTCTGCATTCTTACCTAGCAAGTGAACTTGTTTCTGATTAGT TGCTCCCTCTTTTAGTTCTTCTTTACTCTCCTTAGAAGTTTCTTCGGAAA GTTCAAACTCCTTAGCTTTCATCATTTCTTTACCACTAATCTTCGATTGC ACATCGTGATCACCCTCTTCGCCATCAGATTTGGCAAACTCCTtcgattt ttctttcttctttttcgaaTCATCTTTATCTTCGTCATCTTTTGGCGGCT TCTGATCACCTGGTATTATTTTTGGAGGTAGAACTTTACCAATCGACTTA TAAGGATCTTTTGCGTACGATTTCACACCTTGTATGTTTTCCATAGACGT TGGCAATTTCGCTTTCTCTGCAATCTTCTTGAAATCAGTAACCTGGACTT GTTCTTTCTTTTCTGCGTCATCTCTCGAATAAACACTTGTTTCCTGGTTT CCATCAGCACCTGGACTGGTTTCTTCCAGCTTACGCTTACTTCCTTTGAC AGGCCGTGCGTTGATGCTTTTCAAGACAATGCTCTTTGAGACAgctttaa atttcgatttaagACCAGCTTTCGATACAATTCCACTCTTCAAAGAAGCT TTAATACCTGTTGGTGCTATTCTGGTCTTTGTTATCGAAGCTCTACTTTT CACAGTCGTAATTTTGTTCTTTCTACGGCTCAGCTTTGCCATTCTGCTTC GTTTCTCATTCTTGACGTTTTTCTTGTGATTCTTTTTAGAGAATGTGGAG CCTTTCAATGGTTCACTTGGTGCACTACCTATGTCCGAAAAAGGATCTCT TTTATGTCCGGTAGTTTTCTTCGGTCTACCAATTACCTTTTGTCGCTTTT GCTTCTTTGAGTGTTTGGGCATGCGGCTCCGTTTACTCTTCTTGTTTTTA CGAGACACCTTTCCTCTTTTCGAGACTTGCTTACGtgatgtttttctttc cctctttgCGCCTTTCTTTTGATTAACTTTGGTTGGTAGCCTGTGTCTCT TGTTCCCGATATCAGCGAAAGGGTCTTTCTTAATAGTGGCATGAATTTTA TTGatctttttcaaaggttttaGAGACTTGGTTTGAGCTTTATCAAGTTT ACTTGGTGATTTTGAATGGACTTCGCTTCCATAACCAATATCTGCGAAAG GGTCACCAGACTTTTTGTAACCTTTGCTTGTCTGTGTTCGCTTGGATGGC ATCCCAGAGGTGTTTCCTACATCCGCATAAGGGTCTCTTTTGTAGCCTCC TTTAGTTGAAGGCCTCTTATTTGTATGTGTGCGTTTTGTAGGGACATCAG GAGCGCTTCCCAGATCAGCATAGGGATCTCTCTTAGTACTCGTGCTAGGC CCAGGTTTTTTATGGGTTTCTTCACGCTTGACTGGCGTGCTAGGTGCACT TCCTACATCTGCGTACGGATCTCGTTTATAAGAACCTTTCTTGGAATACG TTTGACTTCGAGCCACGGCAGCTCCCATATCTCCATAAGGGTCGCGCCCA TTATCGAAAGTTTGAAGAGTTGGTTTCTTTGGCTGTGTGCTTGACTCCAC AGCACTATCAATATTCGGCATGTTAGCTAGAAATCTGAAAGGTTTCATTT CGAACAAACGTTTCCTGGTTTCAGGGTTTATCTTCGCCAACGCTTCTTTG AATTTAGGTAACGAATCTAACATCATGGTGTGAGGGCTGCTTGGAGCTTC ACGCGGTGCCACATTATTGGCTGCGGTGATCTGTTCCAAAGCTGACGCTG TCGAATCGACTGTGGACATTGAAGGGGTATGGGTATGAGAGATTAATGAC ATTCCACCTGTGCCTCCGTGCGAGGCATCATCGAAAAGACCCCTCTTAGT ACCTGTTTTGTTAGAGACAGCCCTGATCGATCTTTTCAATCCAGCAGATC CCATCGTTGCATAAGGATCTTTGGCCAGTTTCTCATACGATTCCTTTTTG GTCATATATTTGTAGGTATCTTCCTCCTTATTTGGTAGGATAGCTCCTAC TTCGACCTCATCAGTTGCCCGACGCCTTCTTCGGCGGGCTGGTAAACCAC CTACATCAGCATATGGGTCGTTAACAACCATCTTGGTTTTGGTAGCTTCC TCTTTTTGCTCCTGATGGTGTttctgatgatgatgatgtcTTTTCTGGCC GATGTCTGAATAAGGATCTTTCAATCGATTCAATTGCAACATTgcttctt ttgtttctttcttcaaTTTATCCAAAGTGTTTTCGTATTCAAGGATCTTT GGTTTCAAACTTGATTCAGTCATCTCTGGTGATTGTTGTTGAGCTTCAGC TGTTGATGTGGATGTCATTGCTCTTGTTGCTGCGGACCCTTGGTTACCAG AGAGGATAGAAGTCAATTCTTTAGGCAAACTGACCACAATTCTCATTCTT TTTCCACGTTGTTCGATTCTAGATGGTGTTAAATGAATTTCTTTACCACG GTGGGGCGTTTCCAAGGTGCGCCGGCGGAGATCTGCATACGCTGCTTGAA GCTTGTTTTGGTCTTCCTTAGTCATTGGTTCGTCCTTAAAGATACGATCT GCGATAGTCACTGCAATAGCAGGGTTGTTGGTTATCGCAACAGCTCTGGA GTTTGATCGTTTACCATCTGGAGGCTTCAAATCAAtcgtgattggttctt tcagcTTGGCTAACGGTCCTTTGGGatttaaagtaattttgagTGGAACC CTGGGTAATTTACCGAACAGCTCCACAATAGTACTTGGTTGTTGTGTTTG ACCGACTTCGATTGATTCTC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00054271TCONS_00054271Clytia hemisphaericatranscript
TCONS_00054272TCONS_00054272Clytia hemisphaericatranscript
TCONS_00054273TCONS_00054273Clytia hemisphaericatranscript
TCONS_00054274TCONS_00054274Clytia hemisphaericatranscript
TCONS_00054275TCONS_00054275Clytia hemisphaericatranscript
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_242supercontigscaffold_242:1538557..1547626 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.09 0.05 0.04 0.04 0 0.02 2.42 3.37 0.7 0.98 1.25 0.72 6.38 6.67 3.22 11.56 4.14 4.03 0.07 0.04 4.09 3.96 2.55 3.55 8.79 11.24 0.71 0.25 0.04 0.03